Basic Information

Insect: Monochamus alternatus
Gene Symbol: ZNF236
Assembly: GCA_037114965.1
Location: CM073430.1:21989175-22014136[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 2.8 2.1e+02 4.2 1.2 3 23 130 150 128 150 0.91

2 25 0.55 40 6.4 0.2 1 23 156 179 156 179 0.93

3 25 0.58 42 6.3 0.6 2 23 186 209 185 210 0.93

4 25 0.022 1.6 10.8 0.1 1 23 215 237 215 237 0.98

5 25 0.046 3.3 9.8 0.9 2 23 249 270 248 270 0.93

6 25 7.7e-06 0.00056 21.7 1.3 1 23 295 317 295 317 0.97

7 25 4.8e-06 0.00035 22.3 2.2 1 23 323 345 323 345 0.98

8 25 0.00023 0.017 17.0 0.3 1 23 351 374 351 374 0.97

9 25 0.43 31 6.7 1.9 1 23 385 408 385 408 0.95

10 25 1.1e-06 7.9e-05 24.4 1.9 1 23 502 524 502 524 0.98

11 25 0.0035 0.25 13.3 1.8 1 23 1041 1063 1041 1063 0.99

12 25 0.0048 0.35 12.9 1.0 1 23 1069 1091 1069 1091 0.99

13 25 0.00011 0.008 18.0 3.3 1 23 1171 1193 1171 1193 0.97

14 25 0.0027 0.19 13.7 1.3 1 23 1199 1221 1199 1221 0.97

15 25 2.1e-05 0.0015 20.3 0.6 1 23 1227 1249 1227 1249 0.97

16 25 0.007 0.5 12.4 4.2 1 23 1255 1278 1255 1278 0.97

17 25 2.3e-06 0.00017 23.3 2.4 1 23 1593 1615 1593 1615 0.99

18 25 0.25 18 7.5 0.3 2 23 1622 1643 1621 1643 0.97

19 25 4.8e-05 0.0035 19.2 2.8 2 23 1653 1674 1653 1674 0.97

20 25 2.2e-05 0.0016 20.2 2.6 3 23 1682 1702 1680 1702 0.98

21 25 8.4e-05 0.0061 18.4 1.5 1 23 1709 1731 1709 1731 0.98

22 25 0.88 64 5.8 2.4 1 23 1737 1760 1737 1760 0.88

23 25 0.00071 0.051 15.5 1.6 2 23 1917 1939 1916 1939 0.96

24 25 0.0098 0.71 11.9 0.3 1 23 1945 1967 1945 1967 0.93

25 25 0.04 2.9 10.0 0.1 1 22 1973 1994 1973 1998 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	2.8	2.1e+02	4.2	1.2	3	23	130	150	128	150	0.91
2	25	0.55	40	6.4	0.2	1	23	156	179	156	179	0.93
3	25	0.58	42	6.3	0.6	2	23	186	209	185	210	0.93
4	25	0.022	1.6	10.8	0.1	1	23	215	237	215	237	0.98
5	25	0.046	3.3	9.8	0.9	2	23	249	270	248	270	0.93
6	25	7.7e-06	0.00056	21.7	1.3	1	23	295	317	295	317	0.97
7	25	4.8e-06	0.00035	22.3	2.2	1	23	323	345	323	345	0.98
8	25	0.00023	0.017	17.0	0.3	1	23	351	374	351	374	0.97
9	25	0.43	31	6.7	1.9	1	23	385	408	385	408	0.95
10	25	1.1e-06	7.9e-05	24.4	1.9	1	23	502	524	502	524	0.98
11	25	0.0035	0.25	13.3	1.8	1	23	1041	1063	1041	1063	0.99
12	25	0.0048	0.35	12.9	1.0	1	23	1069	1091	1069	1091	0.99
13	25	0.00011	0.008	18.0	3.3	1	23	1171	1193	1171	1193	0.97
14	25	0.0027	0.19	13.7	1.3	1	23	1199	1221	1199	1221	0.97
15	25	2.1e-05	0.0015	20.3	0.6	1	23	1227	1249	1227	1249	0.97
16	25	0.007	0.5	12.4	4.2	1	23	1255	1278	1255	1278	0.97
17	25	2.3e-06	0.00017	23.3	2.4	1	23	1593	1615	1593	1615	0.99
18	25	0.25	18	7.5	0.3	2	23	1622	1643	1621	1643	0.97
19	25	4.8e-05	0.0035	19.2	2.8	2	23	1653	1674	1653	1674	0.97
20	25	2.2e-05	0.0016	20.2	2.6	3	23	1682	1702	1680	1702	0.98
21	25	8.4e-05	0.0061	18.4	1.5	1	23	1709	1731	1709	1731	0.98
22	25	0.88	64	5.8	2.4	1	23	1737	1760	1737	1760	0.88
23	25	0.00071	0.051	15.5	1.6	2	23	1917	1939	1916	1939	0.96
24	25	0.0098	0.71	11.9	0.3	1	23	1945	1967	1945	1967	0.93
25	25	0.04	2.9	10.0	0.1	1	22	1973	1994	1973	1998	0.94

Sequence Information

Coding Sequence: ATGTTGGCTAATACACAATTAATACCAACAAGCAATGATAAAGAAGATTTGACTACGTTTGTAGCCATACCTGTTGATTCCTTAAAGAACCCTACAGAATATGATAATTTAAGAGTGgtccaaaatattgttattaaacaGTTACCAGACGGGACGATATGCCTCGCAGAAGCATTTgagGAAAAGCAGAATTTTACTCAGGAACCGTTTCAGCTGACGGAAGCTATTCCTTTAAAACTAATCAGTGATACAACAGAGAAACCGCACATTagAAATCGTACAATTATGCTACAACCTCCTTCACGAAAACAAACTCACGATAAGTTTCTTCAAGATAAAAAACCACTGAAAAAGTTAGAACCGAAACCTTCAAATCAAAAGTATTTATGTATAAAGTGCGACAATTCTTTTGATTCAGTTATACAGTATCGTCATCATATAAAATGGCACAAATGCCAGAAGAAATTCAAATGCGAAAAGTGTGCTTCTGGTTATAATGTCGAAAATAACCTAAAGATTCATATGGTCCTAATGCATTCTGAGGAGCGCAACATGCAGTGCCCAGTATGTCAAGTTAGTTTAACATTTCAAAGAGTTGCTAGTTTGAGATCCCATTTAATGATGCATCATGTAGAGGAATTTTATTCATGCGACGAATGTGGTGCAGAATACGAAAAAGAAgctGATTTTCTTAAACACGTTGAAACACACACTATAAAGAAAAAAGCCAGTTTGAAACCTTTAACATGTTCCCACTGTAAATTAGAATTTAAGGAACCTAAGGAATTCAGAGCACATGTTGCAGACCATGTAAAGCTTCGAAAAACGTTCATGAGGAATAGGAGACCCAGGAAACCTGGGGGTAGAAGGGAGGAATCCAACCATGTGTGCCTTATATGcaataaaagttttatcaagAACTCTTTACTTGAACGACATTTGAGGATTCACAGTGGGGAGAAACCTTTCAagtgccAGTATTGTGATCGAAGCTTTACCCAAAAAGGAACTTTACAAATTCATCTAAGCAGACACACAGGTGTCAAACCCTATGCTTGCACTTTGTGTCCTGCCAGATTCAATCAGAAAGGTAATTTACAGGTACATGTGAAAAAAACCCATACATTCCCGACAGAAAAAGaccaaaaaatgtataaatgttcACAGTGCTCATGTATCTTCAAGAAAATTGCTACCCTAAACGGTCACGTCACGAAAGCTCATCTAAATACAAGAGATACTTCCAAACTGGACGATAGTCTTATCGAGGACGTCTTGTCTAAATTGAAAGAGCTTGAAAGACAGACTTCGGGGAACCCCCAGAACAGATGTATCGAAAAGAACAAAGAAAATGAACCGAAAGAACATATCGTGATTGAAAATAGAACTGTGCAAGTGCCtgaatttgaaaagaaaaatttcatcaatttgacggAGTCCACTAATGATGGTACTGTAAAGAAATATTTAGTAAGGCAGAAAAAAGTTGGGGATGTTCGGTGGTATTTTTGCAACTACTGCTCGAAGCAGTTCAAAAAACCTTCAGATTTGATTAGGCATATGAGGGTTCATACCAAAGAAAAACCGTTTAAGgtacaGCTGTTAATTGATCTGAGTTTTATTATTTCGGTGAATAGTTTTAAGATGTCTTCAGATAGTGACGGCAATAGTGATATGGAATTAGTGGAGGATGATGAAAACTGGACCGAAGCAAGAGAGAACAGGAAAGCCAAAAGGAAAAGAACAAAAGATTATTCTCAAGAAGAAgttaataatatcattttaGGACCTGCCAAAAAAACACAACAGATAAACACTACACAAAAAGCTACTACAAGTTCTTCAACTATTCAGAAAAACACATCACAAAACATTAACAAAAACACATCAACAAACAATTATTCACTGCAAATGCAAAACATCCTTAACCAACAGTACAAAAACATGTATTACCTAATGACCAATAGAGAATTCACCAGGACACAAATTGCGGATTTCTGGAATTCAAAGAACCCCCAATCTCGAGATGTCATAATAAAAACAAGCAAAGGATTCCTACTTAAaactaatttagaaaaaaatgtggcTTCAAATTATCTTACAACGCTTAAGCAGAGCGAAGTATTACAAGATTTCCAAGAAACTAACCCAAATCGACAAACAGCCAATAAAACCATAAATGCCACGTTTGCTTGCGTAATTGCTTCAGTTGAGCAGGACATCGAAGACTTAGAAATGAGAGAATTTTTAGAAGCAAACAGCATAAAACTAAGGTACTGCAAACGAATAACTTCTAGAGCCACAGGAAAATTAACCCAACTGATAAGAATTATAACCGGAGACTTTCCATCGTTTCAAAAACTGCTTAACGAaggagtattttacaaaaataaacattatccGGTTCACCCAAGTACACCGCCAGAACCTGTACCCTCTCCATGTGCAAAATGCTCACTTTACACACACACAACAGAACTTTGCAATTTACCATTAACATGTAGAAAATGTAAAGGAAAACATAGTACCAGTAATTGCACATCACCTTTGCCTGAAAAATGTACGGCATGTAATTCAGAGGAGCACCAAGCATGGTCGATCCACACACCTCCTACTTTTATTATGCCAAATAATCCCAACTCGACACCAGATGTATTTATGTGCACGGAAAATATCAGAAACAATATAACCGATGTAGAACTAATCTCGGACCTTGGCAGTGACCACTTAGCCATCCAATTTAAACTCTATCTTCAGAATAATCCCACCCCGCATCCAATTGAGACGATACCAAACATAAACCCGCTCATAAACGACGACGACGACAATAATACCAATATCACAGAAGAGGAATATTATAACACACTAAGTTCAGGCAAAAACACAGCTCCCGGCCACGATTTTATCAGCAGGAATACTCTAAGAAAACTGAAACACAGTATACACCTTGAAATtatcaatatatataattactGTTTAAAAAATCATCACTTCCCAACAGAATGGAAAACTGGCATCATAATCACAATCCCAAAGCCAAATCAAGACCATTCGCATCCCCAAAACTATAGACCAATAACCTTGCTACCAGTAATAGGACTTTTGGATAAAACATCTGTCTTTCAGTGCCAGCAGTGTAGCTCTGAGTTCACGTTAAAATCGACTCTGCTGTCTCACATCAAGACCCACACCGACAAAATGAATTACACCTGTAAAGTGTGCAACTCTTCTTTTATGTCTTTGAGGGTACTAAACGCTCACCTCAGGAAACATGATTTTGAATCCCTACCGAAATGGCAGTGTATAACTTGTGGCTTTCTTTTTGACGAATTGGAACAGGGAATTAAACACAGAGACAAGATGGGAAGGGAGAAACCCCACGTCGTGCAGCCATTCATCAATCATATTTTGAAACAGCCGTTGTACCAAACCACTTACGGTTCTTTAGCATTTAAGCCTCCAAAAACAAGATTACCTAATACAGGATCCGAATCGCCCACCCTCCGACCGTTTCATTGTACAATATGTGACGCCAGATTTACGAGAAGAATCAATCTCAAACGACACATTCAGTTCCACAATGGGGACAGaaatttcaaatgtaatttatgCCCTAAGACTTTTATAGCTTCATACAGATTgaaagaacatttaaatttccACAACAACGTAAAGAACTATGCCTGTAAGCAGTGCGATAAGAGGTTTGTCACTTCAACACTCTTGAAGAGACACGTTATCATCCACAATAGTCACAAGCCTTACCAGTGTCCATATTGTACGAAAACTTTTAAGACGTTGCTCTTGTGCAGGACTCACATCAGGAAAGTACATAAAAAGGAAGTGGTTAGCAAGTTAAATTTGGAACCGGAAAGTCTCCTAACCACAATGGAATCTAATCCAGGATATAAACTGAGTGTGACAATGGAGACATTGCCAATCACTTCAGAAAATGTACTtcagAATTTGTCACCTACTTCTGACAACGAGAACGTAGTAATTGAACAGATGCTTCCAGAAGGGGGTAACTGTATCCAAATAATGAATTCAGATGGCGCTGCTACAGACCTTAACAGTTACCCCACCATCTATGTCAACATGAATGATTTACAATTTCTCGACCCTTCAAACTTGAATTTGGGTATTACAAACGAGTCTCAGTTAAAGTTACAGAATGTTGACGCTTCGTTAATAAATCAACAggaaaatatgcaagtaaacgATATCATTTTCAACATAGACCCCATGAAACCTGGCTTAAATTTACCTCCTGACGAAATTTTTGAGACTTCTCGTAGTGAAAGTAGTGAGAGTCAGGTCTCAAACGCTTTGCCAGGTATAACTGAAATCCCCACAAAACCCATAAAATTCAGCGGCTTCTCCGAAGAAAACGTAAACGATAAATCTGGAAAATTAAGCTTGCTGTTGAGTAACAACACGAATTTATACACAAACGTTGGCTTGaacaactatttaaatttaccgttaactataggagaagGAGGCGCTGTTTTTGACTCGAACAGCTCGAGTACAGTGTTCCAGCCGACAACCGTCGCAGACCTAAGTCGGGTGGACGACATCTACGAGACCacaaacataatatgtataagTTGCAGCGGAATGTTTACAAATCTGGATACCTTTCAGGTGCACACCTGCATTTCTTTAAATGAAGAACCCGTGGATGTCGAAAATATTCAACAGCCTGACGAAGATCCCAACTGTAATAACAAAGTGGCGAATGAGAACCCGGAAGAGAGTCAGAGGGAGATTTTTAAATGTGAGGTGTGCAGTAAAGTGTTTTCTCAGAAGTCTTCCTTCGATCGGCATTTAAGGACTCATTCCGTCAAGTCGAACATTGTGTGCAGTGTGTGCAAGGCTGTGGTGAGCGGAAGAACCCACTACCTCAAGCACTTAGCGACGCATAAGGGCCCTAAGGCCACATTGATGAGGAGCTGCAAGTTTTGCTTTAAGGAGTTCAAGAAGCCCTCCGATCTGaatCGACATCTCAGGACACATACTGGAGAAAAGCCGTTTGGTTGTCATCTTTGTGGGAAAACATTTACTCTGAAGTCAACTCTTGAGTCGCATATAAAAACGCACGATCCGACTCCTAAACAGTTCAGCTGTAACGTTTGCAACTCATTCTTCTCGTCAAAGTCGAGTCTTAAAGTTCACATGACTATCCACACAGGTCAAAGACCCCACAGTTGTTCGTTCTGCAATCAAAAATTTAGGACCGTTGGCAACAGAAAATCTCACGAGGCTCTCATGCATCTCTCAAAGTCCAAGAAATCCGGGCAAAGCAAACATGCTAGCGTTAAAAATGTACTGGAATCCGTAGCTTCTGGAattgttaacaatttaaatgAGAACCAGCCGAATCAGAACGGTCCGTTTCAAAATAATGAGGCTGAAAGTACATCGGTgAAAATTGTGTCTGAAGATCTTCCTCCTCAAGAAAACACATCAATAACCACAGAAAACTTGCTGTCGACACTTCAGGACGATCAGATACCGATCGATCCGGTCCTGCTCCTCCAACAACTCCAAATGTCTGGCCTCATCCTCACCAACGAGAATAACGAGCCTGTTTCCACATTACTGTTAGACGATGGCACCATTCTCAATGTTGACGGAACGAAAGACAACATCCCCGAACTGTCATTACAGCCCGTGGAAGCGCAAGATGCGGTGAATGTCGGCAGTACCGCAGCCGTTAAGACTGAGAAGGTTAGGAATTTAGAGTGCGATATCTGCCACAAGATGTACGCCTCCAAAGACGTACTTAGGAAACACAGGAAGAAGGTTCATGGGGTGAATAAGAAGTATCCATGCATTAAGTGCGATAGGGCTTTCGACACCCAGGATGAGCTTAGTAAGCACAACAAGTGGCATGCTGGGTACCGAGCATTCTCTTGTGTTTATTGCGCTAATAGTTTTACGGAGGAGTCTGGACTCAAAATTCATATGAAAAGCGATGAGGCCCATTTCTCGCTCGATGgttatgttaataaacaaaactgTCATATCTCCGAAAATCCACATTCAATTGTTGAAGTGCCGTTACACCCGCAAAAAGTGACGGTCTGGTGTGCACTATGGTCTGGTGGTGTCATTGGCTCTTATTTTTTTGAGGACGATCAAGGAGCACCCGCTACCATCAATTCCGAACGATATGGCCGTATGTTAACCGACTTTTTTTGGCATGAAATTGAAGGTATGGATCTGGCCGATAAATGGTTCCAACAAGACGGAGCCACAAGTCACACAACACAAGCTAATCGGGCTTTGTTACAAGAAAAGTTTCCAGAACAAGTAATTTCGAGATTGGCTGATTTgcattggccaccaaggtcctGTGACCTGACACCGTTGGACTTCTTCTTGTGGGGCTATGCAAAAGATCGCGTTTATGCCAACAATCCTCTAACGATTGACGCATTGAAAGACAATATTCGTCAAGTTATGGCCGAAATATTGCCTGAAATGTGCCAAAAAGTGATACAAAATTACCTCAAGAAGATTGAGTCCTGCAGAGGGTCCCGTGGAggacatttaaataatattatatttcacaCATAA
Protein Sequence: MLANTQLIPTSNDKEDLTTFVAIPVDSLKNPTEYDNLRVVQNIVIKQLPDGTICLAEAFEEKQNFTQEPFQLTEAIPLKLISDTTEKPHIRNRTIMLQPPSRKQTHDKFLQDKKPLKKLEPKPSNQKYLCIKCDNSFDSVIQYRHHIKWHKCQKKFKCEKCASGYNVENNLKIHMVLMHSEERNMQCPVCQVSLTFQRVASLRSHLMMHHVEEFYSCDECGAEYEKEADFLKHVETHTIKKKASLKPLTCSHCKLEFKEPKEFRAHVADHVKLRKTFMRNRRPRKPGGRREESNHVCLICNKSFIKNSLLERHLRIHSGEKPFKCQYCDRSFTQKGTLQIHLSRHTGVKPYACTLCPARFNQKGNLQVHVKKTHTFPTEKDQKMYKCSQCSCIFKKIATLNGHVTKAHLNTRDTSKLDDSLIEDVLSKLKELERQTSGNPQNRCIEKNKENEPKEHIVIENRTVQVPEFEKKNFINLTESTNDGTVKKYLVRQKKVGDVRWYFCNYCSKQFKKPSDLIRHMRVHTKEKPFKVQLLIDLSFIISVNSFKMSSDSDGNSDMELVEDDENWTEARENRKAKRKRTKDYSQEEVNNIILGPAKKTQQINTTQKATTSSSTIQKNTSQNINKNTSTNNYSLQMQNILNQQYKNMYYLMTNREFTRTQIADFWNSKNPQSRDVIIKTSKGFLLKTNLEKNVASNYLTTLKQSEVLQDFQETNPNRQTANKTINATFACVIASVEQDIEDLEMREFLEANSIKLRYCKRITSRATGKLTQLIRIITGDFPSFQKLLNEGVFYKNKHYPVHPSTPPEPVPSPCAKCSLYTHTTELCNLPLTCRKCKGKHSTSNCTSPLPEKCTACNSEEHQAWSIHTPPTFIMPNNPNSTPDVFMCTENIRNNITDVELISDLGSDHLAIQFKLYLQNNPTPHPIETIPNINPLINDDDDNNTNITEEEYYNTLSSGKNTAPGHDFISRNTLRKLKHSIHLEIINIYNYCLKNHHFPTEWKTGIIITIPKPNQDHSHPQNYRPITLLPVIGLLDKTSVFQCQQCSSEFTLKSTLLSHIKTHTDKMNYTCKVCNSSFMSLRVLNAHLRKHDFESLPKWQCITCGFLFDELEQGIKHRDKMGREKPHVVQPFINHILKQPLYQTTYGSLAFKPPKTRLPNTGSESPTLRPFHCTICDARFTRRINLKRHIQFHNGDRNFKCNLCPKTFIASYRLKEHLNFHNNVKNYACKQCDKRFVTSTLLKRHVIIHNSHKPYQCPYCTKTFKTLLLCRTHIRKVHKKEVVSKLNLEPESLLTTMESNPGYKLSVTMETLPITSENVLQNLSPTSDNENVVIEQMLPEGGNCIQIMNSDGAATDLNSYPTIYVNMNDLQFLDPSNLNLGITNESQLKLQNVDASLINQQENMQVNDIIFNIDPMKPGLNLPPDEIFETSRSESSESQVSNALPGITEIPTKPIKFSGFSEENVNDKSGKLSLLLSNNTNLYTNVGLNNYLNLPLTIGEGGAVFDSNSSSTVFQPTTVADLSRVDDIYETTNIICISCSGMFTNLDTFQVHTCISLNEEPVDVENIQQPDEDPNCNNKVANENPEESQREIFKCEVCSKVFSQKSSFDRHLRTHSVKSNIVCSVCKAVVSGRTHYLKHLATHKGPKATLMRSCKFCFKEFKKPSDLNRHLRTHTGEKPFGCHLCGKTFTLKSTLESHIKTHDPTPKQFSCNVCNSFFSSKSSLKVHMTIHTGQRPHSCSFCNQKFRTVGNRKSHEALMHLSKSKKSGQSKHASVKNVLESVASGIVNNLNENQPNQNGPFQNNEAESTSVKIVSEDLPPQENTSITTENLLSTLQDDQIPIDPVLLLQQLQMSGLILTNENNEPVSTLLLDDGTILNVDGTKDNIPELSLQPVEAQDAVNVGSTAAVKTEKVRNLECDICHKMYASKDVLRKHRKKVHGVNKKYPCIKCDRAFDTQDELSKHNKWHAGYRAFSCVYCANSFTEESGLKIHMKSDEAHFSLDGYVNKQNCHISENPHSIVEVPLHPQKVTVWCALWSGGVIGSYFFEDDQGAPATINSERYGRMLTDFFWHEIEGMDLADKWFQQDGATSHTTQANRALLQEKFPEQVISRLADLHWPPRSCDLTPLDFFLWGYAKDRVYANNPLTIDALKDNIRQVMAEILPEMCQKVIQNYLKKIESCRGSRGGHLNNIIFHT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -