Basic Information

Gene Symbol
Kdm5
Assembly
GCA_037114965.1
Location
CM073432.1:15479173-15489612[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.8e-25 2.5e-21 77.3 0.1 2 89 117 200 116 200 0.94
2 2 0.037 2.4e+02 3.7 0.0 26 77 1240 1290 1223 1300 0.70

Sequence Information

Coding Sequence
ATGACTACAAAAGTAGAAAAGCAGATAAATTGTGCAAATGGCCTTAAATGCCATCCTGGTAGTTCAAAGACTTCTCCAATAAAATGTGGTGATCATTATTCACAATACAAGGAAGAAACATTTCAATTTGAAATACCTCCTGAGGCCCCAGTTTTTTTTCCCACTGAAGAAGAATTTCAAGATCCCTTAGCCTACATAGCAAAAATAAGACCTATAGCTGAAAACACAggcatttgtaaaataaaaccaCCAGCAcattggCAACCACCCTTTGCTGTAGATGTAGACAAACTAAGATTCACACCTAGAATACAAAGATTAAATGAGTTGGAGGCGAAAACTCGTGTCAAACTCAACTTTTTAGACCAAATTGCTAAATTTTGGGAACTACAAggttcgtctcttaaaattccTATGGTAGAACGAAGAGCTCTAGATTTGTATACACTTCATAGAGTTGTTCAATTCGAAGgCGGTTTTGAAAATGTCACCAAAGATAGAAAATGGTCAAAAATATCTCAAAGAATGGGATACCAAGTTGGGAAAAGTATTGGGACTATATTAAAAACACATTATGAGAGGTTGCTCTATCCATTTGATGTTTTTAAACAAGGAAAAACTGTCGACATTAAATTTGAGCAGACTTCAGAAGACACCGAGAAAGCTGACAAAGATTACAAACCCCATGGTATTGTAAATCGGATGCAAATCAAACCACCTCCTGAGAAAAATGCAAGGCGGTCAAAGCGATTTGAAAATGATGAAAGCAAGACTGaaaatttagctcttaagataaaagaagaaaaaactGAAGATGATGAAATGGGAAACAAGGAACTGCGACGTTTGCAGTTTTATGGTGCAGGACCAAAAATGGCTGGATATGATGACAAGAAAGAAGCTAAACCTCGAAGCAAGAATATTAAATATGATTTCGATCCActtGCGAAATATGTTTGCCATAACTGCAATCGTGGTGATGCTGAGGAATATATGTTACTTTGTGACGGATGTGATGACAGTTACCACACGTTTTGTCTCATGCCGCCTCTATCAGAAATACCTAAAGGCGATTGGCGGTGCCCTAAATGCGTGGCGGAGGAGGTATCTAAACCTATGGAAGCATTTGGCTTTGAACAAGCTCAAAGGGAATACACTTTGCAACAATTTGGAGAAATGGCCGATCAATTCAAGTCGGAATACTTTAACATGCCCGTACATATGGTGCCAACAAGTACAGTGGAGAGGGAATTTTGGAGAATAGTTTCTTCGATAGATGAAGATGTTACTGTGGAATATGGAGCTGATCTACATACAATGGACCACGGATCAGGTTTCCCAACAAAGTCATCGAGTAACCTTTTCCCTGGAGATAAAGAATATGCCGAATCaagttggaatttaaacaatttgcCAGTACTAGAAGGATCTGTACTTGGTTATATTAATGCTGATATATCAGGCATGAAGGTTCCTTGGATGTATGTTGGAATGTGTTTTGCAACATTTTGCTGGCACAATGAAGATCATTGGagttattcaataaattatttgcacTGGGGTGAAGCAAAAACTTGGTATGGTGTACCAGGAAGTAAGGCGGAATCATTTGAGGAAACAATGAAATCTGCAGCGCCAGAATTGTTTCATTCACAGCCTGATTTATTACATCAATTAGTAACTATAATGAAcccaaatattttaatgaacgCTGGTGTTCCTGTATACAGAACTGATCAACATGCTGGAGAATTTGTGGTGACTTTTCCGAGGGCTTATCATGCTGGTTTCAATCAAGgTTACAACTTTGCAGAGGCAGTAAATTTTGCTCCAGCTGATTGGCTTAGGATGGGACGTGAATGTGTTTTACATTATTCACATTTAAGACGTTTCTGCGTATTTTCCCATGACGAATTGGTCTGTAAAATGGCTCTTGATCCAGAGAAGTTGGATCTAACCATAGCTGCAGCCACATATCAAGATATGCTTGTTATGGTAGATACTGAGAAACGATTGAGAAAAACTTTATTGGACTGGGGAGTGACCAGTGCAGAGAGAGAAGCTTTTGAATTACTCCCTGATGATGAGAGGCAGTGCGAGGTCTGTAAAACGACATGTTTTCTATCAGCAATTACTTGCAAATGTTCAACAGATGTTCTAGTTTGCCTTAGAcactataaaaatttatgtgaaTGTCCACCACAGAATCGCACACTAAGGTACCGTTATACTTTAGACGAATTGCCGGTTATGCTAAAAGCTTTAAAATTGAAAGCCGAATCATTCGATCATTGGGTTGCTCGGGTAAAAGATGCTTTAGATCCAAAAACGCCAAAGACTCTTAATCTTTCTGACTTGAAGGCACTATTAAGTGAAGCTGATGGTAAAAAATTTCCTAAATGTGATTTGCTTCAGACATTAACAAGTGCTGTTGAAGATGCAGAGAAATGTGCAAGTGTTATACATCAATTGGACTTAAATAAAATGCGGACTCGTACAAGAAACTCTAACGATACCAAATATAAGTTAACTGTGGAAGAACTAACTTTATTTTGTGAGGAAATTGATAGTTTAGCTTGTATTTTGGAAGAAGCGAAAAGTATTAGGGAACTACTTCAGCAGACGAGgagatttgaagaaaaaagtgTACATTTATTATCTCTGGCTTTATCTGAGTGTTCCATCAGTGAACTGGAAGCCTGTAATGTTCATGGAAACGGTCTCTGTATAGAGTTACCCAACTTGCGTCTTATTGCAACTCGACTGAAGCAAGTGCAATGGCTTCGTGATGTTGAAGCATACAGGAATAAAACAAACGTTATGGGTCTTGATGCCATAAAAGACCTCATACGTGAAGGAACTATGATACCACCTCATGCTGAAATGGAAGAAGAATTATCAAAACTCCAAGGTATCCTTCAAACAAGTGAAGAATGGGAAGAACAGGCTAATGAGGTTCTGAAATCTGAAGACAATAATGTATTGATCCAAGTAGATAAATTACTAAAAGAAGCATctaaaatttcttgttttttaCCCAGTGAAGGTCATTTGTATGATTCGATGAAGAAGGCAAGAGATTGGTTAAGATTGCTGGAAGAAATGAATTCTGCGGAATATTATCCATATTTTAGTGCCATGGAAGAACTGATCAAGAAAGGCAAGTCTCTAGCCCTCCATCTTGTGGAAGTTGATAGAATGAATGACTATCTTACTTTAGCAACTGGATGGAAAGAAAAGACTAGTCGAGCATTTCTGaggaaaaattcgaattgttcTCTTATGGATGCATTGTCACCTAGAACTACACTTCCTAATTCTGTAAAAAACAATAAGAAAACCAAAAGTACAGAAGATGAAACTAATCCAATATCTCTAACAAATGCGATGGATCCAGCTGCTGTGGTAGCTGTATTCAAAGATGCAGAAGATGCAGAAATGgctatgataaaaaaattacgtaCTGCAAATATGGCAAAAAGTTTAGACCCCAGTGAAGGGCATACATTCTGCGTGTGTGGAAGAGGTCTCTTTGGAGTCATGATGCAATGTGAATTATGTAAAGACTGGTTCCACGCAACCTGCACACAACTTCCAAAAGTTGCAACAACAAAGTACAAAGGAAATTTCACAAATATAGCACTGCATTTGGGTTTTAAAGACTGCAAATTCCTGTGCCCAAATTGCCAACGCACGAAACGCCCTCGTTTAGATGTTATATTAGGATTACTAATGTCACTGCAAAAATTATATGTACGAGTTCCAGAAGGTGAAGCTCTGCAGTGTCTTACTGAGCGTGCTATGAATTGGCAAGACAGGGCTAGGCAGTTATTACAACACCCGGAACTTGAAAAGGCAAAGAACAAATTAGCTATGTTTAGTCAAAAGTATAATGAAGCTGCAGCTAGACAAAGAACTGAAAAGATTATCTCAACAGAATTAAAGAGAGCATCAAAGAATCCAGAATTACATCAGAGAGTTCAAGAGATAACTCCGTACAGTGGTGTAACAGAAGAAGGTGTAACTTGTGACAGTGGCATTAATGATTCGGATGATGCTTCCAGAGAATCCAAAGATTCTGATGACCGTATGGGAGAACACGCTTATTCTTTACATCTTCCGAAAGTTGGTGACGGAGAAGATTACATATTAGATATTAATGTGGAAGTGAAAAAACAGTTAGAAGAACTGCTTATGGAAGGTGATTTGTTAGAAGTTTACTTAGATGAAACTTTTGCTTTATGGAAACTTATGCAGGCCTCAAGGGAACCTGAAAGAGAAGCTGTGCTAATCGATTTTGACgcACATCTGAAAAGTACTCCTAAGAAAAGAGGACGAAAACGTCTTTCTGAAGAAATAGAATCATCTAAAAAAGGAGGAAAAACGGTAAAAGTGGAAGGAGAAAAAAAGATTCGTGGACGTAAGGTAAAAGATAACAAAGAACTTACCAACAAAAAAAGAGGCAAGCGAAGAATTCGTCATTGCCAGTCCACATCTGCTCCATCAGACagtgatgatgacgatgatgaagCATGTGCTGCAAATGGCTGTCAAAAACCAACTGGGCAAAATGTGGATTGGGTACAGTGTGATGGAGGCTGTGAACAGTGGTTCCACATGGCTTGTGTTGGATTGTCAGCAGAGGACATAAATGAAGACGAAGATTACATTTGTATAACTTGTTCAAGAACAACTACATACGAAAATTTGAATGACAGCCGATCAAGCAGTCCAAGATCTCCCGATTCAACTCAGCCTTCCACTTCTAAAGACTTCTCATAG
Protein Sequence
MTTKVEKQINCANGLKCHPGSSKTSPIKCGDHYSQYKEETFQFEIPPEAPVFFPTEEEFQDPLAYIAKIRPIAENTGICKIKPPAHWQPPFAVDVDKLRFTPRIQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERRALDLYTLHRVVQFEGGFENVTKDRKWSKISQRMGYQVGKSIGTILKTHYERLLYPFDVFKQGKTVDIKFEQTSEDTEKADKDYKPHGIVNRMQIKPPPEKNARRSKRFENDESKTENLALKIKEEKTEDDEMGNKELRRLQFYGAGPKMAGYDDKKEAKPRSKNIKYDFDPLAKYVCHNCNRGDAEEYMLLCDGCDDSYHTFCLMPPLSEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSEYFNMPVHMVPTSTVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSSNLFPGDKEYAESSWNLNNLPVLEGSVLGYINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEAKTWYGVPGSKAESFEETMKSAAPELFHSQPDLLHQLVTIMNPNILMNAGVPVYRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLRMGRECVLHYSHLRRFCVFSHDELVCKMALDPEKLDLTIAAATYQDMLVMVDTEKRLRKTLLDWGVTSAEREAFELLPDDERQCEVCKTTCFLSAITCKCSTDVLVCLRHYKNLCECPPQNRTLRYRYTLDELPVMLKALKLKAESFDHWVARVKDALDPKTPKTLNLSDLKALLSEADGKKFPKCDLLQTLTSAVEDAEKCASVIHQLDLNKMRTRTRNSNDTKYKLTVEELTLFCEEIDSLACILEEAKSIRELLQQTRRFEEKSVHLLSLALSECSISELEACNVHGNGLCIELPNLRLIATRLKQVQWLRDVEAYRNKTNVMGLDAIKDLIREGTMIPPHAEMEEELSKLQGILQTSEEWEEQANEVLKSEDNNVLIQVDKLLKEASKISCFLPSEGHLYDSMKKARDWLRLLEEMNSAEYYPYFSAMEELIKKGKSLALHLVEVDRMNDYLTLATGWKEKTSRAFLRKNSNCSLMDALSPRTTLPNSVKNNKKTKSTEDETNPISLTNAMDPAAVVAVFKDAEDAEMAMIKKLRTANMAKSLDPSEGHTFCVCGRGLFGVMMQCELCKDWFHATCTQLPKVATTKYKGNFTNIALHLGFKDCKFLCPNCQRTKRPRLDVILGLLMSLQKLYVRVPEGEALQCLTERAMNWQDRARQLLQHPELEKAKNKLAMFSQKYNEAAARQRTEKIISTELKRASKNPELHQRVQEITPYSGVTEEGVTCDSGINDSDDASRESKDSDDRMGEHAYSLHLPKVGDGEDYILDINVEVKKQLEELLMEGDLLEVYLDETFALWKLMQASREPEREAVLIDFDAHLKSTPKKRGRKRLSEEIESSKKGGKTVKVEGEKKIRGRKVKDNKELTNKKRGKRRIRHCQSTSAPSDSDDDDDEACAANGCQKPTGQNVDWVQCDGGCEQWFHMACVGLSAEDINEDEDYICITCSRTTTYENLNDSRSSSPRSPDSTQPSTSKDFS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00386968;
90% Identity
iTF_01226399;
80% Identity
-