Mmin027683.1
Basic Information
- Insect
- Molorchus minor
- Gene Symbol
- stc
- Assembly
- GCA_029963825.1
- Location
- JAPWTJ010003162.1:1673-4266[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.5 1.6e+04 -3.1 0.3 14 18 34 38 34 39 0.78 2 15 0.94 9.9e+03 -2.5 3.0 6 10 65 69 61 69 0.61 3 15 0.49 5.1e+03 -1.6 0.2 4 10 95 101 95 101 0.88 4 15 3e-06 0.032 15.1 13.8 3 19 109 125 108 125 0.93 5 15 2.2 2.4e+04 -3.7 0.8 14 18 131 135 131 136 0.71 6 15 6.5e-10 6.8e-06 26.8 12.9 1 19 141 159 141 159 0.98 7 15 0.58 6.1e+03 -1.8 0.5 6 10 189 193 188 193 0.88 8 15 3.8e-11 4e-07 30.7 14.9 1 18 199 216 199 217 0.98 9 15 3 3.2e+04 -4.8 1.9 5 14 225 227 224 229 0.45 10 15 3 3.2e+04 -5.1 2.4 6 10 247 251 246 252 0.81 11 15 4.6e-08 0.00048 20.9 14.0 4 19 264 279 257 279 0.87 12 15 0.63 6.7e+03 -1.9 2.0 5 10 308 313 308 313 0.93 13 15 0.0022 23 5.9 9.0 1 11 319 329 319 330 0.96 14 15 0.51 5.4e+03 -1.6 0.6 4 10 334 340 333 341 0.62 15 15 0.0011 11 6.9 9.4 1 12 347 358 347 358 0.97
Sequence Information
- Coding Sequence
- ATGCTGCATCACAAAGAGAGATTAGAGGAAATGTTAAATCGTAGACTTCTGGAATGCCTAGTATGTTGTGAAAAAATCAGACACCCAGACAAGGTGTGGAATTGCATGCAGTGTTATCACATTTTGCACTTATATTGTGTAGCTGCCTGGGCAAAGTCGTCAAAAGTAGAAAATGGTTGGCGTTGCCCAGCTTGTCAAAACGTGTGTACCGAAGTTCCTAAACAATATAAGTGCTACTGTGGAAAAGCTCTTGATCCGAAATATGATCCAGGCGTTAGACCTCACGGCTGTGGAGATGTTTGTCTACGAAAAGGTCGCATGTGTGAACATAAATGCACTATTCTATGCCATCCGGGTCCATGCCCTGATTGCAGTGTGATGGTGGAAAAGCCATGTGGCTTTTGTAATAAAATTCTGAACTGCGGTATTCATCAATGTAAATCTGTATGTCACTCTGGAAATTGCACTCCTTGTAGGGAAGCTATAATACAGGAATGTTATTGTAATAAACAGGGCAGAAAAGTGATTTGTTCAGCTGAAATTTCTGGCAGTTTGCGTTACAGTTGTGAAGATATTTGTGAGAAGATATTGTCATGTGGAAATCATAAATGTCAAGAGAAATGTCATGATGGGCCTTGTGATCCTTGTGCTAGAGATGTTAGTGTGGTACACTCGTGTCCTTGTGGGAAGACCCCTTTGGAGAAAGCAAGGGCATCTTGTCGTGATCCTATTCCGTGTTGTGATAAGatatGTGGCAAGTCATTAACATGCGGTCAACCGTCATTACCACATACATGCAGAGAACTGTGTCATAATGGTAATTGTCCACCATGTCCTCTAACTACTGTAGTTCGATGTCGCTGTGGACATATGGACAAAGAAGTATCATGTTCTAAAGTAACTACTAAAGCCGATGATGCTAGATGTGAAAAAAAATGCACTAAAAAACAAACATGTGGGAAGCATAGATGTAATCAAAGATGCTGCATCGAAATCGAACATTTCTGTCCTTTGCCTTGCCTTAACCATCAGCTGTCGTGTGGTCAACATAGATGTGGAGGCACATGCCACTCTGTCGATGTCCCCCATGTATAG
- Protein Sequence
- MLHHKERLEEMLNRRLLECLVCCEKIRHPDKVWNCMQCYHILHLYCVAAWAKSSKVENGWRCPACQNVCTEVPKQYKCYCGKALDPKYDPGVRPHGCGDVCLRKGRMCEHKCTILCHPGPCPDCSVMVEKPCGFCNKILNCGIHQCKSVCHSGNCTPCREAIIQECYCNKQGRKVICSAEISGSLRYSCEDICEKILSCGNHKCQEKCHDGPCDPCARDVSVVHSCPCGKTPLEKARASCRDPIPCCDKICGKSLTCGQPSLPHTCRELCHNGNCPPCPLTTVVRCRCGHMDKEVSCSKVTTKADDARCEKKCTKKQTCGKHRCNQRCCIEIEHFCPLPCLNHQLSCGQHRCGGTCHSVDVPHV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -