Basic Information

Gene Symbol
RERE
Assembly
GCA_029963825.1
Location
JAPWTJ010000529.1:88389-93668[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.5e-09 6e-06 26.5 4.0 1 34 223 256 223 258 0.92

Sequence Information

Coding Sequence
ATGGCCACCACTCAAGGAGAAATCAGGGTGGGTCCCGGAAACCAGAGTACCGTCCCGGGGTGCCTCCAGAGCAACTATCTCCTGATCCAGAACATTCCAGGACTAGAGAGGGAGCTCAGATGGGTTCCAGCCATGACTTTGGACTCTGACCTTCTTATGTACCTACGTGCTGCCCGTTCCATGGCAGCCTTCGCAGGAATGTGTGATGGAGGTTGTCCGGAAGATGGTGCCAATGCAGCTTCGAGAGATGATACTACTATCAATGCACTGGATGTGCTTCACGATTCGGGATATGACCCAGGAAAGGCCCTCCAGGCTTTAGTAAAGTGTCCTGTTCCGAAAGGTATCGACAAGAAGTGGAGCGAAGAAGAGACAAAACGGTTCGTGAAGGGCCTGAGGCAGTTTGGCAAGAACTTTTTTAGGATCCGTAAAGACCTGCTACCTCACAGAGATActCCTGAGCTGGGTTCCCTAAGGAGAATAAGGAATACCCGTAATAGTAGAGGAGGTAATACTTCATCAAATGCAGGCCGTAACGCTCCGACAGAAGCGGAAAACAATAGACCATCACCGCAGCCCGGCAAAGAACCAGGCGAAACGAGTTCTGTAACAGAAGATGACAATGACAGCGAGGACGATAGTGACAGCCGTGATGCACAGTACCGGTGTTCTCATTGCTTCACAACGAATTCTAAAGATTGGCAACCGGGAGGCAAAGACAGGCAAATTCTGTGCTGGGATTGCAGGGCTCACTTCAAGAAGACCAATGAATTGCCACCATTGACAGCACCCCTGCTGTAG
Protein Sequence
MATTQGEIRVGPGNQSTVPGCLQSNYLLIQNIPGLERELRWVPAMTLDSDLLMYLRAARSMAAFAGMCDGGCPEDGANAASRDDTTINALDVLHDSGYDPGKALQALVKCPVPKGIDKKWSEEETKRFVKGLRQFGKNFFRIRKDLLPHRDTPELGSLRRIRNTRNSRGGNTSSNAGRNAPTEAENNRPSPQPGKEPGETSSVTEDDNDSEDDSDSRDAQYRCSHCFTTNSKDWQPGGKDRQILCWDCRAHFKKTNELPPLTAPLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01013296;
90% Identity
iTF_01013296;
80% Identity
iTF_01013296;