Basic Information

Insect: Molorchus minor
Gene Symbol: -
Assembly: GCA_029963825.1
Location: JAPWTJ010001199.1:37569-39574[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 3.3 3e+02 3.0 0.5 1 18 146 163 146 163 0.92

2 11 0.0021 0.19 13.0 0.4 2 23 244 265 244 265 0.96

3 11 0.23 21 6.6 1.3 1 23 274 296 274 296 0.95

4 11 6.9e-05 0.0063 17.7 1.2 1 23 305 327 305 327 0.97

5 11 0.00019 0.017 16.3 2.7 1 23 335 358 335 358 0.98

6 11 0.021 1.9 9.9 4.2 1 23 367 389 367 389 0.98

7 11 0.041 3.8 8.9 1.5 1 23 397 419 397 419 0.98

8 11 0.027 2.5 9.5 2.5 1 23 427 449 427 449 0.97

9 11 0.0095 0.87 11.0 4.6 1 23 457 479 457 479 0.98

10 11 0.05 4.6 8.7 3.2 1 23 488 510 488 510 0.97

11 11 0.0015 0.14 13.4 1.2 1 23 515 537 515 537 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	3.3	3e+02	3.0	0.5	1	18	146	163	146	163	0.92
2	11	0.0021	0.19	13.0	0.4	2	23	244	265	244	265	0.96
3	11	0.23	21	6.6	1.3	1	23	274	296	274	296	0.95
4	11	6.9e-05	0.0063	17.7	1.2	1	23	305	327	305	327	0.97
5	11	0.00019	0.017	16.3	2.7	1	23	335	358	335	358	0.98
6	11	0.021	1.9	9.9	4.2	1	23	367	389	367	389	0.98
7	11	0.041	3.8	8.9	1.5	1	23	397	419	397	419	0.98
8	11	0.027	2.5	9.5	2.5	1	23	427	449	427	449	0.97
9	11	0.0095	0.87	11.0	4.6	1	23	457	479	457	479	0.98
10	11	0.05	4.6	8.7	3.2	1	23	488	510	488	510	0.97
11	11	0.0015	0.14	13.4	1.2	1	23	515	537	515	537	0.99

Sequence Information

Coding Sequence: ATGGATATCTGTAGGTTGTGTTCGAGATGCGTCGACGACGAAAATTCTGTAGTCTTTAATGATATATACATAGAAATTCTTGAGGCTGTACTACTAGAAGTTaaCGTAGCAAAAAATGAAGGATGTCCAATATGTCATGACTGTTCCGTCAATctagaaaaatgttttcaattcaAAGCAGCGTGTTTGGTTTCGGAAGATGTTGTAAATCCTTATATCAGCTCTAGTAACAACAAAATGGATttgaaagatatttatttacttactaaCAATTTAGACGTGGTTCCAACGAACTGGAACGTTTGTCGGTTATGCTTACAGTGTATGAAGAACGAACTGTTTATTACTCTTAAAGAATTAACCGACGACTCCAATCTGAAGGATGCTTTACAGAAATATATCCCGGAAGTGAGAATGGAATCTACTTCTCAAGTTTTTGTATGCAAGTCATGCGTCCAATCTCTAAATAACAATTATAACTTTATAAGAATGTGTTTGGAAAATGAATCTAGACTAATTAGCGAGTTTACGTTTGAAAATATGGAAGACAGTATTTTGTATGAGCTGAACCTTTTTGATATCGATATGGAGAGTATGGCTGGGAATTTAGAAGACGCCGAGATGATAGAAGATAGTATCACAAAGGACCAGCCCAAAGTGGCGAAGAAGTACTGTGAAGAAATAAACCGGAAGTTAGCAATGTCCGTCCAGAAGAAAATTACGTTACCGACTTGCCCGATCTGCAGGCGTATATTCAAAAGTAAACTTGTCCTGGAGAAACATCGCGTAGTCCACCAGGACACTTCGAAAATACAGTTGCACGAATGCTCTTTATGTGATTTCAAGACTAGATATAAAATGTCTCTAGCCGGTCACTCTCTAGTCCACACCGACACGtcgaaattcaaaaaattcaaGTGCGAAACCTGCGGCTACGAGACCATACGAAAATCCAACTACAACAAGCACGTGGAGAACCACAAAGACCCATCGGAGGGAAAATACAAGTGCTCGCACTGCACCTTCGTGTCCACCAGATCCGACCTGCTGAAAATCCACCTTCTAACAACCCACGGGGATCCCTCCAAAGCTTACACCTACAATTGCGAACTTTGCACGTATAAAACGATGAGAAGGTACGACATGAAGCATCATATGATCAGGCACGGCGCCCAGCCCCCGCGTTTATATTCGTGCGAGCAGTGCCCGTACAAGTCGAGGTGGAGGAGGCTCTTAACGAACCACCAGATGAAGCACAAACCCCAGGAACAGGAGACTTTTATTTGTTTCCACTGTTCGAGGGAAATGAAAGTGAAGGCGCACCTCGTAAACCACATGCTTGTGCATAGGAAGTCGAAAAACGAACCGTTCAGGTGTGAGGAATGCCCTTTTAAGACCAAGTATAAGAAGCACTTCAAGGAACACGTGCTGTCTCACAAGGATCAGTCGGAGGTTACCATGCATAAATGCGACCTGTGTAACTACAAGTCTCGTTTTCCACGGTATGTCAAGCAACATATGGTCATGCATACTCGGACTAAATACAAGTGTGCAGAATGCCCGTTTGCTGCCAAAACACCGTCTTGTATCAAGAAACATATTAAACGCCATAAACAATCCATGTAA
Protein Sequence: MDICRLCSRCVDDENSVVFNDIYIEILEAVLLEVNVAKNEGCPICHDCSVNLEKCFQFKAACLVSEDVVNPYISSSNNKMDLKDIYLLTNNLDVVPTNWNVCRLCLQCMKNELFITLKELTDDSNLKDALQKYIPEVRMESTSQVFVCKSCVQSLNNNYNFIRMCLENESRLISEFTFENMEDSILYELNLFDIDMESMAGNLEDAEMIEDSITKDQPKVAKKYCEEINRKLAMSVQKKITLPTCPICRRIFKSKLVLEKHRVVHQDTSKIQLHECSLCDFKTRYKMSLAGHSLVHTDTSKFKKFKCETCGYETIRKSNYNKHVENHKDPSEGKYKCSHCTFVSTRSDLLKIHLLTTHGDPSKAYTYNCELCTYKTMRRYDMKHHMIRHGAQPPRLYSCEQCPYKSRWRRLLTNHQMKHKPQEQETFICFHCSREMKVKAHLVNHMLVHRKSKNEPFRCEECPFKTKYKKHFKEHVLSHKDQSEVTMHKCDLCNYKSRFPRYVKQHMVMHTRTKYKCAECPFAAKTPSCIKKHIKRHKQSM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -