Basic Information

Insect: Molorchus minor
Gene Symbol: -
Assembly: GCA_029963825.1
Location: JAPWTJ010001133.1:77252-86283[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.13 11 7.4 1.1 1 23 45 67 45 67 0.97

2 10 0.0095 0.87 11.0 2.0 1 23 76 98 76 98 0.97

3 10 0.0013 0.12 13.7 0.8 1 23 118 140 118 140 0.98

4 10 0.00064 0.059 14.6 0.9 1 23 149 171 149 171 0.98

5 10 1.5e-05 0.0014 19.8 0.5 1 23 180 202 180 202 0.98

6 10 0.54 49 5.4 4.1 1 21 211 231 211 235 0.90

7 10 0.059 5.4 8.5 2.0 1 23 248 270 248 270 0.97

8 10 0.00023 0.021 16.0 1.2 1 23 276 298 276 298 0.98

9 10 0.0075 0.69 11.3 1.8 1 23 307 329 307 329 0.99

10 10 0.00053 0.049 14.9 1.6 1 23 338 361 338 361 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.13	11	7.4	1.1	1	23	45	67	45	67	0.97
2	10	0.0095	0.87	11.0	2.0	1	23	76	98	76	98	0.97
3	10	0.0013	0.12	13.7	0.8	1	23	118	140	118	140	0.98
4	10	0.00064	0.059	14.6	0.9	1	23	149	171	149	171	0.98
5	10	1.5e-05	0.0014	19.8	0.5	1	23	180	202	180	202	0.98
6	10	0.54	49	5.4	4.1	1	21	211	231	211	235	0.90
7	10	0.059	5.4	8.5	2.0	1	23	248	270	248	270	0.97
8	10	0.00023	0.021	16.0	1.2	1	23	276	298	276	298	0.98
9	10	0.0075	0.69	11.3	1.8	1	23	307	329	307	329	0.99
10	10	0.00053	0.049	14.9	1.6	1	23	338	361	338	361	0.98

Sequence Information

Coding Sequence: ATGCGAATCGCTAAGAATCAGCCAGACGCAGCTGTGTACAGCGATAATGGAGATTTCGAACCGAAACCGACGGTGTTAATAAAAGTAGATTCGTGCGATTTCACGACTGAGATAGTTGATAACCTGGTTATGTACAACTGCAGCGCTTGCGAATACCGAACAAAATATAAGAGAAACATTAAACTGCACATCAACGCTCATATGGATAAATCCGGATTAAAACTGTATAAATGTGAACTGTGCACCTTTGAAACACGACGTAAAGACTATCTTAGCACACATTTTCTGATCCACATGGATACGTCGGAGgtacACATCGCGATTCATTCCGATAGGCCCGAGGAGAAAATTTACAGATGTGAAATTTGCGATTACAAAACCAAGTGGAAAGCCAGCCTTCAACGACATTATCTGGTACATAAAGACATCTCAGAAATGGATttgtataaatgtgaagtttGCGAATTTCGGACGAAACGGATACGAAACCTCCAATCGCACCTTCTGATCCATAAAGACAGCTCGGAGGTGAGAATGTTCACTTGCGAAATATGCGGATATAATTCGAAAAGCAAAGGAAGCCTTAAGAAACATCTGATCGTTCACAAAGACGAGACGCAAGTCGAGATGCACGTCTGCGAATTATGCCCGTTTAAAACGAAACACAAGCGAGTTTTAGAAAGACACCGCTGCCTCGCTGGGCATCTACAGCTTCACGAAGGCAACTCCCACCCGGAAACTTATCATTGTGAGGTGTGCGAGCATGAAACGAAGGATAAAACAGCTTTTAGCGCACACCTTTTGCTGCATAACGACATCGAGGTGTACAGCTGTGAGCTGTGCGCGTATACGACGAAGCGTAAGTCGTACCTTAAGTCGCATCTGCTGGTTCATAAGGATAAGTCAGAAGTGGAGATGTACGAGTGCGAGACCTGTAAGTTTAAAACGAAATACAAAGCGAGTATCAGGTCTCATCTTCGGGTTCATAAGGGGATTTCCGAGAGAGAGACGTATACTTGTGCGACTTGCAAATTTGTAACGAAGCACAAGGGTAGTTTGAGGAATCACATCGCGACGATCCACAAGGATGATCCGGATGTGCAAACTTACGACTGTGAATTGTGTAATAGCGGATGTGTTAAAGCTCCGTTAATCTGCCCGTCTTGTGTGGAATATGCGGCGACTTACTCGGACCTCACAAAATCCTGTGAAACTACTGGAAGAAAAATAGCCATGTATCGTGATCGAGAAGAAAGCAATAATAAAGAGCTGGTAAAGCTAAAGGGTGTACAGtcatatttatgtaataatatgtcATATGATCCCTGGTcatttactaaaatttttattaaaagcgaTTGTTCCTTTGACGATTACGAAGATGAGTATTCTGAAGATGCAAAAGATTTTCAGAAGTTGCAGGGACCTGATTCGGAAATTGGTACCAAGGAAGAACTTGATCAGGATACAGACACAGGGAAAGTCTATAATCGTGAAATTTCCCTGTTGGGAAGCGAATTCCAAGAAAGATTTTACCAGCCACCGTTTAGTTCACAAAGATCCCTTAAACCAAGAAATGTTCAAATAACGTTTCCACCCAAACTTCAAGAATGGAGGTCGACATTAAAGAAGAAAAAGGTGTGCAGAATCTGCCTTACGGAAATCAAAGGCGATTACCAGCTAATTGACGACACTTTTAAAGAGAGTTTTAAGATACTAAATCTCAATATGAATTTGGAGGTGACGAAGAGCCCATTATATGCGACAACTGCGCGGACCAGGTCCAGAAGTTGGTCGACTTCCAAGACGGCTTGCCTCGAGAAGGACCCTATGAAGGTTAACGATGCGATTGCCGTTCCCCAAATCATAAAATGTGTTGCTGCTGTAAGGAATTCCATGAAGAAAATACCTCTCGAGGAATCTGAGAGTAAGGACGATATCGCAGTTACAATCACGGAAAACCAAATCGAGGACCCAACAAAGATTGAAATCAAGATGGAAGCCGACGAGATAGAGCCAGAGACGCCAGAGCTTGTTTAG
Protein Sequence: MRIAKNQPDAAVYSDNGDFEPKPTVLIKVDSCDFTTEIVDNLVMYNCSACEYRTKYKRNIKLHINAHMDKSGLKLYKCELCTFETRRKDYLSTHFLIHMDTSEVHIAIHSDRPEEKIYRCEICDYKTKWKASLQRHYLVHKDISEMDLYKCEVCEFRTKRIRNLQSHLLIHKDSSEVRMFTCEICGYNSKSKGSLKKHLIVHKDETQVEMHVCELCPFKTKHKRVLERHRCLAGHLQLHEGNSHPETYHCEVCEHETKDKTAFSAHLLLHNDIEVYSCELCAYTTKRKSYLKSHLLVHKDKSEVEMYECETCKFKTKYKASIRSHLRVHKGISERETYTCATCKFVTKHKGSLRNHIATIHKDDPDVQTYDCELCNSGCVKAPLICPSCVEYAATYSDLTKSCETTGRKIAMYRDREESNNKELVKLKGVQSYLCNNMSYDPWSFTKIFIKSDCSFDDYEDEYSEDAKDFQKLQGPDSEIGTKEELDQDTDTGKVYNREISLLGSEFQERFYQPPFSSQRSLKPRNVQITFPPKLQEWRSTLKKKKVCRICLTEIKGDYQLIDDTFKESFKILNLNMNLEVTKSPLYATTARTRSRSWSTSKTACLEKDPMKVNDAIAVPQIIKCVAAVRNSMKKIPLEESESKDDIAVTITENQIEDPTKIEIKMEADEIEPETPELV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -