Mmin015403.1
Basic Information
- Insect
- Molorchus minor
- Gene Symbol
- Zbtb41
- Assembly
- GCA_029963825.1
- Location
- JAPWTJ010000782.1:22419-24454[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.053 4.8 8.6 1.3 1 23 67 89 67 89 0.95 2 15 0.00064 0.058 14.6 0.2 3 23 95 115 93 115 0.97 3 15 0.097 8.9 7.8 2.6 3 23 122 142 122 142 0.97 4 15 0.00043 0.04 15.2 1.0 1 23 148 170 148 170 0.98 5 15 1.1e-06 0.0001 23.3 0.1 1 23 176 199 176 199 0.94 6 15 4.4 4.1e+02 2.6 0.6 3 23 231 251 229 251 0.85 7 15 7.1e-08 6.5e-06 27.1 1.7 1 23 268 290 268 290 0.97 8 15 0.47 43 5.6 1.1 1 12 295 307 295 309 0.91 9 15 0.00048 0.044 15.0 0.4 1 23 321 343 321 343 0.98 10 15 0.087 7.9 7.9 0.4 1 23 349 371 349 371 0.91 11 15 0.0011 0.1 13.9 1.2 2 23 374 396 373 396 0.96 12 15 0.00051 0.046 15.0 1.8 1 23 422 444 422 444 0.98 13 15 0.067 6.2 8.3 1.2 2 23 484 505 483 505 0.91 14 15 3.9 3.6e+02 2.7 2.4 5 23 513 531 509 531 0.88 15 15 6.2e-05 0.0056 17.8 1.7 1 20 537 556 537 558 0.94
Sequence Information
- Coding Sequence
- atggaGAATCAGGGGAATATTAAAGTGCAAGCTCTCGATGAGGACGGGTTTAACAATCCACCAATAGTGATATTCAATATAAAAACCGAAGAGGAAGATTACCCGGAATTAGTGACTGAAGACGATATTTTAACGAACTATCTTCCTAGCGATCATGCGTTGGAAAATAGTGAAAATAATTCCAACATTAAACGAACTTTTAAATGTATTCATTGTAATGAACAATTTCCAGGCCTAAAGCACCTGCAGGTGCACGAGGCCGTCCACGACCCGAGAATGATATGCCCAGTATGTGGCAaggatttcaaaataaaaaaagtatttgttcAGCACATTAAAATGCACTTGGAATATCCTATCGGGTGTCAGCAATGTCCTGAAGTGTTTTTCGACAAGAAGTCCTACCATTTACACAGATATTCACATAAGAAAACTGTGACTTACAATTGCGAGTACTGTTTCAAGGAATGGtctaataaaaaagatttaaaacttCATATAAGGGTCCACACCAACGAGAGACCGTATGTGTGCGGTGAATGCGGTAAAGCTTTCAAACAAAAAGGGGCCCTTAATACCCATATCAGCGCCCTACATGCCAATAACAAGATTGTTAAGAAGGAACGGTTCCGATGTGACATACACAAAAAAAGCGGTCAGAATTTGATTGAGGCCTATGCACCCATAGACTGTCACCTGTGTGGTGAAAAAGTACTAGGAATACGACAATTCTACAAACATCAGCAAGTTCATTTACTCATGACTGATCAAGAAGTGAGGGCTTGCGGTGTTGTCCGAAGATTCAATTGCAAAGTGTGTGACAAACGGTTTACTCGTAAATCTAACTTGTTTGTACATATGGACgtccatttagaaaaaaagttcaAGTGTGAGGCACattgttcaaaaaaatttacgtaTTTAGGCATCAAGCTTCATACCGAATGGTATTCTCGAGAGTTTACCTGTAGCGAATGCAACGAAATTTTCGTAGGTCGCAAGAGTTTTAAGGAACACTTGGAAGTACATCCGGGAGCTTTGAAATATACTTGTAAAATTTGTGGCGTCACCCTTAAGGCTTCTACATTTGTCCAACATTCCCAAATGATGCATAGTATAAAATGCAGTGTATGTTTTAGGAAATTTGTCTCGCTAGCTGATTTCAAGAAACACAACAGGATAAATCATAGACTGAATTCTGAAAACTTGCCTCCAGGGGAAGAACATGTAGAAACTAAGTTCCCGTCCGATGTCAAGTACAAATACGTTTGCAAAATCTGTAATCATCAGTCGCCGACATTGGATAATTTTAAAGATCATATGAAATTGCATGAAAAACACTACCAGTGTATCAGCTGCAAGAAAAACTTTTTGCATTTCCGTAATTTGATGTTCCACCTTAAGCATAATATTTGCAGAAGGAACTTGGAAGACAGCGGCAACCATCTcaagtgtatattatgtaaaaatgagTATTCCGACATGAAAACGTTAATGACGCATATGAGACGACACAGCGCTATCCTGACATGTATATTCTGTCACTCCAAGTTTAAACAGAAGGACTTACAGGGGCATATAAGGAGGGCTCATCCGGAGAATTTCAGGTTTAGTTGTGAAAAATGCGGTACTAGTTTTTGCACTTCTAACGAACTCGTGCGGCATACGCTATATTGCTATAAGATGTTATCGGTGGAAAATGAACTAGATAAAATGTCGTGGAATTCAGAGACAAATATGGAAGGGGCGCGTAGATGA
- Protein Sequence
- MENQGNIKVQALDEDGFNNPPIVIFNIKTEEEDYPELVTEDDILTNYLPSDHALENSENNSNIKRTFKCIHCNEQFPGLKHLQVHEAVHDPRMICPVCGKDFKIKKVFVQHIKMHLEYPIGCQQCPEVFFDKKSYHLHRYSHKKTVTYNCEYCFKEWSNKKDLKLHIRVHTNERPYVCGECGKAFKQKGALNTHISALHANNKIVKKERFRCDIHKKSGQNLIEAYAPIDCHLCGEKVLGIRQFYKHQQVHLLMTDQEVRACGVVRRFNCKVCDKRFTRKSNLFVHMDVHLEKKFKCEAHCSKKFTYLGIKLHTEWYSREFTCSECNEIFVGRKSFKEHLEVHPGALKYTCKICGVTLKASTFVQHSQMMHSIKCSVCFRKFVSLADFKKHNRINHRLNSENLPPGEEHVETKFPSDVKYKYVCKICNHQSPTLDNFKDHMKLHEKHYQCISCKKNFLHFRNLMFHLKHNICRRNLEDSGNHLKCILCKNEYSDMKTLMTHMRRHSAILTCIFCHSKFKQKDLQGHIRRAHPENFRFSCEKCGTSFCTSNELVRHTLYCYKMLSVENELDKMSWNSETNMEGARR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -