Basic Information

Insect: Molorchus minor
Gene Symbol: -
Assembly: GCA_029963825.1
Location: JAPWTJ010001207.1:47059-59297[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00036 0.033 15.4 0.9 2 23 172 194 171 194 0.96

2 10 0.00077 0.071 14.4 1.9 1 23 200 222 200 222 0.98

3 10 0.88 80 4.8 1.8 1 23 228 250 228 250 0.95

4 10 2.8e-06 0.00026 22.1 1.1 1 23 256 278 256 278 0.96

5 10 1.1e-06 9.8e-05 23.4 0.4 1 23 287 309 287 309 0.99

6 10 1.2e-07 1.1e-05 26.4 0.5 1 23 315 337 315 337 0.99

7 10 7.5e-05 0.0069 17.6 0.5 1 23 343 365 343 365 0.95

8 10 3.2e-06 0.00029 21.9 2.8 1 23 371 393 371 393 0.98

9 10 8.6e-05 0.0079 17.4 5.1 1 23 399 421 399 421 0.98

10 10 4.3e-05 0.004 18.3 6.2 1 23 427 450 427 450 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00036	0.033	15.4	0.9	2	23	172	194	171	194	0.96
2	10	0.00077	0.071	14.4	1.9	1	23	200	222	200	222	0.98
3	10	0.88	80	4.8	1.8	1	23	228	250	228	250	0.95
4	10	2.8e-06	0.00026	22.1	1.1	1	23	256	278	256	278	0.96
5	10	1.1e-06	9.8e-05	23.4	0.4	1	23	287	309	287	309	0.99
6	10	1.2e-07	1.1e-05	26.4	0.5	1	23	315	337	315	337	0.99
7	10	7.5e-05	0.0069	17.6	0.5	1	23	343	365	343	365	0.95
8	10	3.2e-06	0.00029	21.9	2.8	1	23	371	393	371	393	0.98
9	10	8.6e-05	0.0079	17.4	5.1	1	23	399	421	399	421	0.98
10	10	4.3e-05	0.004	18.3	6.2	1	23	427	450	427	450	0.98

Sequence Information

Coding Sequence: ATGGAGACAAGGTGTCGTCTTTGTGCAGAATGTTCTACAGATCAGATACCCATACTCGATGATCTGGGATTTTGTTCAAAAATATTTCAGCTCTTTCAAATCAAAGTTTCTGTTGATGATAGTTTACCAATCTCGTCTTGCCAAATCTGTTACGATATGGTAGAGAAAACATGGGATTTTAATGATCGTATTCAAAAAGCTCAAGAGGTATTAAcagatttgttaaataatattacgGCAATTTTAAACCCGACGGATACTTTGGAAACCCACCCTTTATTGGAAACTCAAAACGTTTTAAGTACTCAAACAGAAGTTGTTGATTTGAACTACCTTGATACAAAAGAAGtcataaaatgtgattttaatttACCAGAAGAAAGTAATGATTTATCTGATTCTTctgaaaaatttgaacaaaagcGCAAATCTCTAAAAACTAAGGGCAAGGTGAAAGACGATGGTACTATAGCACCTAAAAGTGATGTGCTTGGATGGGATACCTATCCCTGGACATGCTGTGATTGTAAAATAGTATTTTCTATGTCTGATGATCTTAAGGAACATTATGCAACGTCACACAATTCTACAGCACGCTATCACTGTGCAGACTGtcctaaaatatattcaaaatatagTACTTTTCTCACACATGTAAAGGTACATCGAATGAAACTTAGATTTTGTTGTGATATTTGCTATAAATGGTTTCCAACGGTGTCTGATCAAGAGCAACACAGATCACAACACGGCGATGAGAGACCTCATGCTTGCAATACATGTGGAAAGAAATTCCGAATGCAATCTGCATTAATAGTACATGTTCGATCACATTTACCAGCAGAATTGAAAAATAGATACCAATGTGACCAATGCCCAAAGAGATTTGGTACAAAACCAAATCTGATGGCACATAAAAGAATACATACAGGTGTGAGAGATTATACATGTGATCAGTGTGGAAAAAGTTTTGTTCAAAAAGGAAATCTTGATAATCATTTACTTACACATACAGTGGTAAGGCCGTTTAATTGCAGTGTATGCGGTAAGgcatttaaaacattaataaggTTACGTAAACATGGATCAGTTCACTCGGGATTAAAACCTCATCGATGCGATATATGCGGACGGCAGTTCAGAGAAAAGAGTACACTAAAGGAACATTACAGGATACACACAGGAGTCATGCCATTTACATGCGAGTTTTGTGGAAAGTGTTTTAGATTTAAGGGAGTTTTAACCACCCATCGAcgacaacacacaggtGAAAGGCCCTATTCCTGTAATGAATGCCAACACCATTTTACTAACTGGCCAAATTACAATAAACATATGAAACGCAGGCATGGAATCAATACTAGTGTCACATGCAGAACAAGACAAGACATTCCACCCACTGGTATGCCCCATCGTAATCCACCTGGAACAGTCTTGGCTCCTCCACTACCAGTTGTCATTCCTGAAAGTTTTGTTGAACCAGCACCAACGTTTTATCCTGTTATAAGTTTATACAATATTTCTGATGAACTTTTACAACCAAGAGCCTGA
Protein Sequence: METRCRLCAECSTDQIPILDDLGFCSKIFQLFQIKVSVDDSLPISSCQICYDMVEKTWDFNDRIQKAQEVLTDLLNNITAILNPTDTLETHPLLETQNVLSTQTEVVDLNYLDTKEVIKCDFNLPEESNDLSDSSEKFEQKRKSLKTKGKVKDDGTIAPKSDVLGWDTYPWTCCDCKIVFSMSDDLKEHYATSHNSTARYHCADCPKIYSKYSTFLTHVKVHRMKLRFCCDICYKWFPTVSDQEQHRSQHGDERPHACNTCGKKFRMQSALIVHVRSHLPAELKNRYQCDQCPKRFGTKPNLMAHKRIHTGVRDYTCDQCGKSFVQKGNLDNHLLTHTVVRPFNCSVCGKAFKTLIRLRKHGSVHSGLKPHRCDICGRQFREKSTLKEHYRIHTGVMPFTCEFCGKCFRFKGVLTTHRRQHTGERPYSCNECQHHFTNWPNYNKHMKRRHGINTSVTCRTRQDIPPTGMPHRNPPGTVLAPPLPVVIPESFVEPAPTFYPVISLYNISDELLQPRA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -