Mmin006473.1
Basic Information
- Insect
- Molorchus minor
- Gene Symbol
- ZNF296
- Assembly
- GCA_029963825.1
- Location
- JAPWTJ010000178.1:76376-90455[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 6 5.5e+02 2.1 1.1 1 23 142 170 142 170 0.75 2 18 1.3e-05 0.0012 20.0 0.4 1 23 185 207 185 207 0.97 3 18 4.7 4.3e+02 2.5 0.2 1 23 239 261 239 261 0.92 4 18 0.36 33 6.0 4.6 1 23 295 318 295 318 0.88 5 18 0.0031 0.28 12.5 5.3 1 23 328 350 328 350 0.97 6 18 0.00036 0.033 15.4 0.6 3 23 357 377 355 377 0.97 7 18 0.00015 0.013 16.7 0.5 1 23 383 405 383 405 0.98 8 18 3.5e-07 3.2e-05 24.9 0.4 1 23 411 433 411 433 0.98 9 18 0.0015 0.14 13.4 0.1 1 22 439 460 439 460 0.96 10 18 0.59 54 5.3 0.1 3 23 575 594 574 594 0.96 11 18 6.6e-05 0.006 17.8 2.2 1 23 599 621 599 621 0.98 12 18 0.0051 0.47 11.8 0.6 1 23 626 648 626 648 0.94 13 18 0.013 1.2 10.6 2.1 1 23 652 674 652 674 0.98 14 18 0.00024 0.022 16.0 0.0 1 23 680 702 680 702 0.96 15 18 3.4e-05 0.0032 18.6 0.5 1 23 708 731 708 731 0.95 16 18 7.7e-05 0.007 17.5 0.6 1 23 742 765 742 765 0.96 17 18 5.5e-06 0.0005 21.2 1.8 2 23 774 795 773 795 0.97 18 18 0.0015 0.14 13.5 3.2 1 23 801 823 801 823 0.98
Sequence Information
- Coding Sequence
- atgggCTTTTCGGTTGGCTCTCAAAATCCCACCCCGGAATTTGaaaaggAAGGTGCGGAAGACGAAACGGATCAACCGAAATCCAAATCCGAAAAAACAACGTCTAAACAGGATTTCGATGACGATGACGACGACCCAACCTGGAGTTTATGTTCcccaaagaaaaagaagaaacacAAAAGGTCCTCGAAAGAAATAGCTGCAAAAAAGAAAGAGCGTAAGAAGAAATCCCCAGAGAAGGAGAAACCTGTTGAAGTAAAAACTGAACCACCTGAACCCGACGACGGTGACATAGATATAAAGAAAGAGATCAAAGAAGAACCTCTCGAGGAACCTCTAGATCCAGTTGAGTTGCCAGTGGTGCTACCATTGTCCGAAGACGAATTTAAAGCAATGATGCCAGATTTAGAAGACAAACGAACGTTCAAATGCCCCTTGTGTTCTAGGCAAAATCAGGATAAAACAGAGCGAACCCCCATGGAACTAAAAGAACATTATAAAGTAGATCACCCGGGTAAGAGATTGAGGCAAGCTCGATTTTCCTTAGAAATCCATCCTTGTGATATTTGCGGCAAAGAATTCAAAACGAGCAGTGGGGTTAAGGACCACGTAGAGACGCACAACAATTACTTCTATTGTGAAGTATGTAATTTatctcataaaaaaatactcgaTCACATACTCCACCTACGTGTACATTCCGAAGCCGGCATTTTTCAGTGTTTAATGTGCGATTTTAATACCCCGGAAATAAACACGATGACGGAACACGTGAATAACCACGAAGACTTGTTGAAGTACTGGTGCAATGCGTGCAAAAAGGGTTTCCAAATACTGCCCTGGTTCCAAGAACACGACAACTACCACACCGGTTTGAAACCTTTCGACTGTGAATTTTGCGGAAAATGTTTCTTGTATTCGCGTTATTTACACGCCCATAAAGTCAACATGCACAAGGAAGACATGAACTGTCCCGTTCTGCACGAGTGCGTTATCTGCAAAAAGCAGTACCAACACAAAAACAGTTTAAAGCTACATATGAACTCCCACACCGGTAATTTCTCCATATGTGACATATGCGGGAAGATGTTGTCCAGCAAGGAGAAGCTCAAGTTTCACATAAGGACTCACACCGGTTACAAGCCTTACAGTTGTACGTATTGCGAAAAGTCCTTTACCAAGAAACCGATATTGGTGGAGCATATACGGATTCATACAGGTGAACGGCCGTACATTTGTGAGTATTGTACCAAAGCTTTCTCTCAGAGATCTAGTTTAGTTATCCACATGAGGGGCCATACAGGTGAGAGACCTTACGTTTGCCAGTTTTGTAATAAGGGTTTTGTTGCGAAGGCTATGCTTAATATTCACCTCAAGACATATGACGGTACGTTGAGCTCGCAAGAGGCAGAAGAAGAAGAAATTTTAATCACTTTCGTAGATGATGATGAGTGTTCGGAATATATCAAACTAGAAGAATACGGCGATATAGAAAATTTTACGTTTATAGAGGATAAAAATGAACCGAAACAAATGAAATCGAGCATCATACTCCAGCCACTCcaggataaaaataaatacatacatgaAACAAAAGAGACAGAGGAACTGTTGGAGAACGAGTTTCTAGACGAAATAAATGAATCGCTAATATTCTCCGTGGACCAATCGGTATCCAAAGGAAAAAAATCCATAGAAAACAAGAGCACAGAGCATGTACTGTGTGCCGTTTGCGGTAAACTGGTTCGGGCAAGAGCGATGACCGCACACTTACGAAGTCATGCTGCCACCGGTTATCAATGCAAAGTTTGCGATTTAACATTCAAGACACTCCAGGAATTCAACAAACACAAAGAAAGCCATACGAATAATGAGTATCCCTGTCAGTTTTGCGATCTAAGCTTCAAAACGGCCACCGAATACGCCCTCCACGGTTTCAAGCATACAAATAATTACTCCTGTTCAATTTGTAATTTCGTTACAAAGTCCAAAGGTTCCATATGTGGCCACATCAAGAGACATGAAGGGCGCTATGAATACTATTGCGATATATGCGGAAAAGGCTTTATTGGCAAAGCTCTTCTCGCAAGTCACGAGGAAATACACTTGGACATAAAGCGGTATATCTGTGAGGTGTGTGGTAAGAAATTCACAGTTCGTAGGTATCTGGAGGTGCATCGCCAACTCAACCATAAAAAAGAACTATATGGTTTTGAGGAGTTGTTCAAGTGTGATATATGCGAAAGGGAGTTCACGTTCGAGAAAAGTTTGATTCGACATCGAAGTGTCATTCACCAGATAGGTGAAAATCGTTCAGTTGAATGTAAAGTCTGTCATAAAACTATCGCAAACAATTACAACTTGAAGTTGCACATGAGGACACATACCGGGGAGAAAAATTACTGCTGCGACCTGTGCGGCAAAGCATTCTCTGCCTACAAGTATTGGAAGAAACACAAATTGACGCACGAACGCAAACTACGTCAGGAGGACTTGAAGGAGGACGAGGAGGAGGAGAAtgagaaaataataaagttcTACGAATACGACTCCTCATCATAA
- Protein Sequence
- MGFSVGSQNPTPEFEKEGAEDETDQPKSKSEKTTSKQDFDDDDDDPTWSLCSPKKKKKHKRSSKEIAAKKKERKKKSPEKEKPVEVKTEPPEPDDGDIDIKKEIKEEPLEEPLDPVELPVVLPLSEDEFKAMMPDLEDKRTFKCPLCSRQNQDKTERTPMELKEHYKVDHPGKRLRQARFSLEIHPCDICGKEFKTSSGVKDHVETHNNYFYCEVCNLSHKKILDHILHLRVHSEAGIFQCLMCDFNTPEINTMTEHVNNHEDLLKYWCNACKKGFQILPWFQEHDNYHTGLKPFDCEFCGKCFLYSRYLHAHKVNMHKEDMNCPVLHECVICKKQYQHKNSLKLHMNSHTGNFSICDICGKMLSSKEKLKFHIRTHTGYKPYSCTYCEKSFTKKPILVEHIRIHTGERPYICEYCTKAFSQRSSLVIHMRGHTGERPYVCQFCNKGFVAKAMLNIHLKTYDGTLSSQEAEEEEILITFVDDDECSEYIKLEEYGDIENFTFIEDKNEPKQMKSSIILQPLQDKNKYIHETKETEELLENEFLDEINESLIFSVDQSVSKGKKSIENKSTEHVLCAVCGKLVRARAMTAHLRSHAATGYQCKVCDLTFKTLQEFNKHKESHTNNEYPCQFCDLSFKTATEYALHGFKHTNNYSCSICNFVTKSKGSICGHIKRHEGRYEYYCDICGKGFIGKALLASHEEIHLDIKRYICEVCGKKFTVRRYLEVHRQLNHKKELYGFEELFKCDICEREFTFEKSLIRHRSVIHQIGENRSVECKVCHKTIANNYNLKLHMRTHTGEKNYCCDLCGKAFSAYKYWKKHKLTHERKLRQEDLKEDEEEENEKIIKFYEYDSSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -