Mmin027690.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Molorchus minor
Gene Symbol
-
Assembly
GCA_029963825.1
Location
JAPWTJ010003166.1:11701-16474[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 0.068 6.2 8.3 1.8 2 23 159 180 158 180 0.96
2 14 1.9e-05 0.0017 19.5 5.3 1 23 185 207 185 207 0.99
3 14 0.00079 0.072 14.4 4.1 1 23 213 235 213 235 0.97
4 14 0.005 0.46 11.8 2.7 1 19 241 259 241 260 0.96
5 14 3.9e-06 0.00036 21.6 0.3 1 23 269 291 269 291 0.98
6 14 0.0033 0.31 12.4 0.2 2 23 495 517 494 517 0.94
7 14 0.00028 0.026 15.8 8.1 1 23 533 555 533 555 0.98
8 14 3.8e-06 0.00035 21.7 1.1 1 23 561 584 561 584 0.95
9 14 0.0048 0.44 11.9 1.0 1 23 596 618 596 618 0.93
10 14 5.6e-05 0.0051 18.0 4.4 1 23 624 646 624 646 0.98
11 14 2e-06 0.00018 22.5 0.5 1 23 653 675 653 675 0.96
12 14 2.5e-06 0.00023 22.2 1.2 1 23 681 703 681 703 0.98
13 14 3.7e-07 3.4e-05 24.8 0.9 3 23 711 731 709 731 0.96
14 14 6.5e-05 0.006 17.8 0.1 1 23 737 759 737 759 0.99

Sequence Information

Coding Sequence
ATGGATTTAGAGCCGATGACAATGAACCAAATTTGCCGGACGTGCAAGTGTATCTCGCCGCACATGAGGTCCGTTTTCGAAGGATACGAAGGTCCCCATCACAGTCCCCGTATTGACGAGATGCTAATGGCCTGTGCTTCAGTCCAGGTGATGTGCGGGGACGGCCTGCCGAATCAGATTTGTCAAGGATGCGTGGAACAATTGAGGAGTTCTTTTTTGTTCAAGCGACAATGCGAAAAAATAGATGCCAGTTTGAGAGAGTATGCAAAAAATGTACAAGTTAACGAAATCAAGGAGGAGCTGCAGAATTCGGACTTTATGGAGTCCTTGAATACCCTAAACAATCTCCTTAACGAGCAGCACACCTCCTCAAATAAAGACTCGCCATCATCGTCGTCTCAAGATGTACCCATGGTGGCGCCCAAAATCGAGACAGACTACATCCAATTCATGGACAACAATCAAATGCTTCTAACATGTCGTGAATGTGCCAAGATATTCACCACTCTGGAAGGCCTACGCTGCCATAAACGCATCCACAGCGGCGGCATGTATAAGTGCAAGCAGTGCAACAAGGAGTATACCAGACTGAACCATTTGCAGCGCCACGAGCAGACCCATGGCAGGAGAAAGGTGCACGTCTGTAGGATCTGTAGCAAAACTCTGACGAGGATGGAACATTTGAAGAGGCATTTGGTGACTCATTTGAGGGAAAAACCATTCTCTTGCAAGACTTGCAACAGGGGATTCAACAGGGTGGAGCATCTGCATAAGCATGTGCCTAGGTGCAAAGGAGACACCGTATATCCCTGCGACATATGCAACAGGGCGTTCAATCGCACCGACAGCCTTGAGGTCCACAGAAAGATGCATGATAATCGAACTCCCAAACTGCCCACAATCGAGAACCTGGACAACATCGAGGATCACTATTTCCAGATCGATCAAGACGAGAACATCGTCTTCTCCGACCACTCTGAAGACAATTCCGATATCGAGGACTGTTTTGAGCCCCAAGTCGAAGTCACGGAAAGCATGGAGGAAATCAAGGAGGTCTCCAATATCGGCCACCTGGATGACGAGAGTAACATTAGTGAGACGTCAATAGTGGTGGAGGCAGAAGATAATGATAGCAGTGCTGATAAGGGCGCCGAAATTGAAGGCGATGAACTAGACGACAAAGCGGAGGTAAAGAAGGAGGCGATTGATGAGGTGGAAGAGATCGAAGACGATAATAATGACAATGATGTCGTTGAAATGATTACTGAGGTTGCTGACGATGAATCTGCCGACAGCACCGATTCTGAATACCTCCCGAAGAAGATGCCATCGCCTAAACAGAAACGCGGTCGAGGCAGGCCTCGCAAGAACCCCAATGCTCCTCCTAAGCCACCCAAAATAAAAGTGCCGGGCAGAGGGGAGGGGCCGTCCCCCGACGAAAGGTATCAAAAAGGAGCAGAAAGACGAGGAATACGGGGAATTCCCTGTCCGGCCTGCAATGAAATGTTCAACACGATATCCCAACTGGATAAGCATGCTAGGTACAGGCACGAAGGGCTTAAGAGGCACATGACCTCTCATTCGGTGGACAAGCCTTTCCGCTGTATGACGTGCACGAAGAGCTTCAACCGGAAAGACCATCTGCACCAGCACCAGAAGTTGCACCAGAGGCAGAACGATTTTGAATGCGACATTTGTCAGAAGGCGTTCAGTAGGGCCGATCATCTGGTGAAACATAAGGCGTCTAAACACGGTATCGGGGATAAGATAATGGGCGATAAGAAATATGAATGCCCTCTGTGCCACAAAGGCTTTACCACAGAAAAGTATCGAGACATTCACGTGAACGGCCACAATGGCCAGAAGGAATACCAGTGCAAAGTGTGCGAGAAGACTTTCCTGTCCAAATCGCACCTTACGGAGCACATGAAGTTCCACAATGaacattccaaaaaattccTTTGTTCAGAATGCGGGCAAAGGTTTATTAGAAATGACTATTTGGTTATACACATGAGGCGACATCGTGGTGAGAAGCCattcaaatgcaaatattgCGGAAAAGgtttcccACGGACAACAGACTTAACAGTCCACGAAAGATATCATACCGGAGAAAAGACACATTTGTGTACAATTTGCGGCAGAGGTTTTGGAAGGGCCTACAATTTGACGGTACACATGAGAACCCACACGGGTGAGAAACCATATCAATGTACCTACTGCGAGGCTGCCTTTGCTCAGGGCAACGATTTGAAAGCTCATGTCAGGAGGCATACCGGGAGAAAGGTTCCAGTGTGA
Protein Sequence
MDLEPMTMNQICRTCKCISPHMRSVFEGYEGPHHSPRIDEMLMACASVQVMCGDGLPNQICQGCVEQLRSSFLFKRQCEKIDASLREYAKNVQVNEIKEELQNSDFMESLNTLNNLLNEQHTSSNKDSPSSSSQDVPMVAPKIETDYIQFMDNNQMLLTCRECAKIFTTLEGLRCHKRIHSGGMYKCKQCNKEYTRLNHLQRHEQTHGRRKVHVCRICSKTLTRMEHLKRHLVTHLREKPFSCKTCNRGFNRVEHLHKHVPRCKGDTVYPCDICNRAFNRTDSLEVHRKMHDNRTPKLPTIENLDNIEDHYFQIDQDENIVFSDHSEDNSDIEDCFEPQVEVTESMEEIKEVSNIGHLDDESNISETSIVVEAEDNDSSADKGAEIEGDELDDKAEVKKEAIDEVEEIEDDNNDNDVVEMITEVADDESADSTDSEYLPKKMPSPKQKRGRGRPRKNPNAPPKPPKIKVPGRGEGPSPDERYQKGAERRGIRGIPCPACNEMFNTISQLDKHARYRHEGLKRHMTSHSVDKPFRCMTCTKSFNRKDHLHQHQKLHQRQNDFECDICQKAFSRADHLVKHKASKHGIGDKIMGDKKYECPLCHKGFTTEKYRDIHVNGHNGQKEYQCKVCEKTFLSKSHLTEHMKFHNEHSKKFLCSECGQRFIRNDYLVIHMRRHRGEKPFKCKYCGKGFPRTTDLTVHERYHTGEKTHLCTICGRGFGRAYNLTVHMRTHTGEKPYQCTYCEAAFAQGNDLKAHVRRHTGRKVPV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-