Basic Information

Insect: Molorchus minor
Gene Symbol: -
Assembly: GCA_029963825.1
Location: JAPWTJ010000004.1:408994-414404[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 3.7e-05 0.0034 18.6 0.3 1 23 296 318 296 318 0.97

2 12 0.39 36 5.9 0.3 2 23 323 344 322 344 0.94

3 12 3.2e-07 2.9e-05 25.0 0.2 3 23 352 372 350 372 0.98

4 12 1.6e-05 0.0014 19.7 2.6 1 23 378 400 378 400 0.96

5 12 2.5e-05 0.0023 19.1 0.1 2 23 407 428 406 428 0.95

6 12 6.1e-06 0.00056 21.0 3.6 1 23 434 456 434 456 0.98

7 12 1.1e-05 0.00098 20.2 3.1 1 23 462 484 462 484 0.99

8 12 8.7e-05 0.0079 17.4 1.2 1 23 490 512 490 512 0.98

9 12 2.7e-07 2.5e-05 25.3 0.4 1 23 518 540 518 540 0.99

10 12 1e-05 0.00096 20.3 2.2 1 23 546 568 546 568 0.98

11 12 1e-05 0.00096 20.3 2.1 1 23 574 596 574 596 0.96

12 12 2.5e-06 0.00023 22.2 0.2 1 23 602 624 602 624 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	3.7e-05	0.0034	18.6	0.3	1	23	296	318	296	318	0.97
2	12	0.39	36	5.9	0.3	2	23	323	344	322	344	0.94
3	12	3.2e-07	2.9e-05	25.0	0.2	3	23	352	372	350	372	0.98
4	12	1.6e-05	0.0014	19.7	2.6	1	23	378	400	378	400	0.96
5	12	2.5e-05	0.0023	19.1	0.1	2	23	407	428	406	428	0.95
6	12	6.1e-06	0.00056	21.0	3.6	1	23	434	456	434	456	0.98
7	12	1.1e-05	0.00098	20.2	3.1	1	23	462	484	462	484	0.99
8	12	8.7e-05	0.0079	17.4	1.2	1	23	490	512	490	512	0.98
9	12	2.7e-07	2.5e-05	25.3	0.4	1	23	518	540	518	540	0.99
10	12	1e-05	0.00096	20.3	2.2	1	23	546	568	546	568	0.98
11	12	1e-05	0.00096	20.3	2.1	1	23	574	596	574	596	0.96
12	12	2.5e-06	0.00023	22.2	0.2	1	23	602	624	602	624	0.98

Sequence Information

Coding Sequence: atgaacgacgactTTCGGGCCTTAACAGGCCTGGAGAGAATCTGTCGAACGTGCttatcagaaaaaaatttcgaagATCTGCGTTCACTTTTTGACCGTTCTTTGGGGGCACAACTTTCCGAAATAACAGCCGTAAAGGTTGAGCCAAATGATGGTTTGCCGAGCAATATGTGCAGCGACTGTTACCTAACACTAAACCTTGCAATAAACTTTAAAGATCAATGTTGGAAATCCGAAAATCATTTGAGAAGTGCGTTGTCTCCTAGCCAAACCCTTTATAGGTCTATAACGATTCTAGGGAGCAATACTGAAGATTTGAGGATTCAGAACTTTGATGATCTTGATTCGAGTTTATTGAAACATGGCACAATAAATCATgaACTCTTATTACCAGAGAGCATAGAAATTACGAGCAACTTTGGAAATGGCAAGCACGAATCTGAAATGATATTTATACAAACTGAAATTCCAGAGAAAAAGGATAACTATATTAACACAAGTATACCAGACTCTCTCGAACATATAATTTGCAGTAATAAGGTAGAAAAAGCGCAAATAGTCCCTAATACTCTGGTTCAAAGTTGCGACAATGGTTTGGATAACTCAACTAAGTTTGAAAACAATCAAGTTATTCCTGGACCAGGAGTCCAAGCTGGcgttttacaaaaagaaaatatttttattgatccGAACATACCAGTTCCACTTGACTTAATAGAATGCGTCAGTACTGAAATGCCAGACACTGGCAATACAATCGAAAATGGCAATTGTAATATAGTTGCGGTATCAGATAAGACTGAAAATACTCAAAACGAACAACATAAGGATGAACAATTACCTAAAGTAGCCTTACAAGAACCTAAACACTCTAGTCGAATATTTTTTGATTGTCAGTATTGTGAAAAATACTTTAAGAATGCTGCTGCTCTGGAAATTCATTTGCTTAAACAtgggaaaaagttaaaatgtgAAGTATGCAGTGAAGAATTTGAATcaatgaaaatatttagagATCATATAATAAAGCACAAGGATTATAGGCCATTTGGTTGCAAAGTTTGTGGTAAATCGTTTTCGGCTCCTGCCAGTTTGACTAAACATATGAGGATTCATGAAGGAAAGAGAAAATACTTATGTACAATTTGTGGCAAGCGGTTTTATGAACTGACCCACCTTACAATTCACACACGTACTCACACAGGAGAAAAGCCCTTAATTTGTAGTATTTGTGGAAAAGCATTTTCGGATCCTCATGGGTTATTAATTCACAATAAGATACATACTGGGGAGAAAAATCATGAATGTGATATATGTGGTAGGAAATTTGCCCATTCCTTCGTGCTGAAGTCCCATATGAGAACCCACACTGGAGAAAAACCCTATCAGTGCAGTACTTGCAACGCTTGCTTTGCGACATCTTCCTACTTAAAAATTCACAAACGTATTCATAGTAACGAGAGGCCCTACAAATGTGAATCATGTCCTAGGagttttattaGCAAATGTGGTTTGATGGCTCATACTCAGATTCACACAGGAGAAAAGAAGTACCAGTGTACAGAGTGTGGGAAAAGAACGTATAGGGCGGCGGATTTGCAGATCCACATGAGGTCTCATACAGGAGAGAAACCATATGCTTGCGATCAATGCGACAAACGCTATCATACATCCAGCAATCTAGCTGCTCATAAAAAAACCCATTTGGGACTTAAAGAACATTTCTGTACTGTATGCAAGAAGGCATTTGGAGACCCTAGGACATTAAAATCCCACATAAGAACCCATACTGGTGAAAAACCTTACGTTTGCATGGTATGCGGAAGGAGTTACTCACAATCTGGACAGTTGGCAGCTCATCGAAAAATGCATGTTAGCTGA
Protein Sequence: MNDDFRALTGLERICRTCLSEKNFEDLRSLFDRSLGAQLSEITAVKVEPNDGLPSNMCSDCYLTLNLAINFKDQCWKSENHLRSALSPSQTLYRSITILGSNTEDLRIQNFDDLDSSLLKHGTINHELLLPESIEITSNFGNGKHESEMIFIQTEIPEKKDNYINTSIPDSLEHIICSNKVEKAQIVPNTLVQSCDNGLDNSTKFENNQVIPGPGVQAGVLQKENIFIDPNIPVPLDLIECVSTEMPDTGNTIENGNCNIVAVSDKTENTQNEQHKDEQLPKVALQEPKHSSRIFFDCQYCEKYFKNAAALEIHLLKHGKKLKCEVCSEEFESMKIFRDHIIKHKDYRPFGCKVCGKSFSAPASLTKHMRIHEGKRKYLCTICGKRFYELTHLTIHTRTHTGEKPLICSICGKAFSDPHGLLIHNKIHTGEKNHECDICGRKFAHSFVLKSHMRTHTGEKPYQCSTCNACFATSSYLKIHKRIHSNERPYKCESCPRSFISKCGLMAHTQIHTGEKKYQCTECGKRTYRAADLQIHMRSHTGEKPYACDQCDKRYHTSSNLAAHKKTHLGLKEHFCTVCKKAFGDPRTLKSHIRTHTGEKPYVCMVCGRSYSQSGQLAAHRKMHVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -