Basic Information

Insect: Molorchus minor
Gene Symbol: -
Assembly: GCA_029963825.1
Location: JAPWTJ010000460.1:118350-124274[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 7.1e-05 0.0065 17.7 2.4 1 23 97 119 97 119 0.97

2 16 2.1e-05 0.0019 19.3 1.8 1 20 125 144 125 147 0.94

3 16 1.2e-05 0.0011 20.0 0.8 1 23 153 175 153 175 0.98

4 16 0.00016 0.015 16.5 3.6 3 21 183 201 181 203 0.94

5 16 0.00011 0.0099 17.1 4.7 1 23 209 231 209 231 0.99

6 16 2e-05 0.0019 19.4 5.3 1 23 237 259 237 259 0.97

7 16 7.5e-06 0.00069 20.7 8.2 1 23 265 287 265 287 0.97

8 16 7.9e-08 7.3e-06 26.9 2.7 1 23 293 315 293 315 0.98

9 16 5.8e-05 0.0054 17.9 6.7 1 23 321 343 321 343 0.97

10 16 7.9e-05 0.0073 17.5 4.8 1 23 349 371 349 371 0.97

11 16 1.3e-06 0.00012 23.1 3.0 1 23 377 399 377 399 0.98

12 16 2.7e-05 0.0025 19.0 8.0 1 23 405 427 405 427 0.98

13 16 2.3e-05 0.0021 19.2 9.1 1 23 433 455 433 455 0.98

14 16 0.0046 0.42 11.9 2.2 8 23 468 483 462 483 0.95

15 16 2.5e-05 0.0023 19.1 7.6 1 23 489 511 489 511 0.97

16 16 5.2e-07 4.7e-05 24.4 0.3 3 23 538 558 537 558 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	7.1e-05	0.0065	17.7	2.4	1	23	97	119	97	119	0.97
2	16	2.1e-05	0.0019	19.3	1.8	1	20	125	144	125	147	0.94
3	16	1.2e-05	0.0011	20.0	0.8	1	23	153	175	153	175	0.98
4	16	0.00016	0.015	16.5	3.6	3	21	183	201	181	203	0.94
5	16	0.00011	0.0099	17.1	4.7	1	23	209	231	209	231	0.99
6	16	2e-05	0.0019	19.4	5.3	1	23	237	259	237	259	0.97
7	16	7.5e-06	0.00069	20.7	8.2	1	23	265	287	265	287	0.97
8	16	7.9e-08	7.3e-06	26.9	2.7	1	23	293	315	293	315	0.98
9	16	5.8e-05	0.0054	17.9	6.7	1	23	321	343	321	343	0.97
10	16	7.9e-05	0.0073	17.5	4.8	1	23	349	371	349	371	0.97
11	16	1.3e-06	0.00012	23.1	3.0	1	23	377	399	377	399	0.98
12	16	2.7e-05	0.0025	19.0	8.0	1	23	405	427	405	427	0.98
13	16	2.3e-05	0.0021	19.2	9.1	1	23	433	455	433	455	0.98
14	16	0.0046	0.42	11.9	2.2	8	23	468	483	462	483	0.95
15	16	2.5e-05	0.0023	19.1	7.6	1	23	489	511	489	511	0.97
16	16	5.2e-07	4.7e-05	24.4	0.3	3	23	538	558	537	558	0.99

Sequence Information

Coding Sequence: ATGCAGGAACAAGAACTGGTTAAGACTTTAGGTGTCGAGATGGTGCAGAACATGTACAAAGTAAACGTCGATGATTTGAATCAGTTGCTGGCATATCATGAGATTTTTGGAAAGTTGCAAGGAGGACAAGGTGAGCTATCTAACCCAAATCAGAACGTCGTCCAGAACAACTCGAATAACAACATGAATATCCAACAAAACACCGGCAACATCGCCATCGTAACGAAAGACGAACAAGAAGCGTCTACGAGCAACATTTCCGGCGATGGCACACCAACCGTCGGCACCCACGTCTGTGATCTTTGCGGCAAAATGTTCCAGTTTCGTTACCAGCTGATCGTCCACAGACGATACCACATAGAACGCAAGCCGTTCACCTGCCAGGTGTGCGGTAAGGCCTTCTCCAACGCTCAAGAACTCACACGGCACGGCAAGTGCCACCTAGGCGGCAGTATGTTCACGTGCGCCGTGTGTTTCCATGTTTTCGCCAACGCCGCGTCTTTGGAACGTCATATGAAGCGGCATTCGACCGATAAACCCTACGGTTGTACGATCTGTGGCAAGAGCTTTGTTAGAAAAGAGCATTTGGACAACCACACGAGATGTCACACAGGGGAGACGCCCTATAGGTGTCAGTTTTGCGCGAAAACGTTTACTAGGAAAGAGCACATGGTTAATCACGTTAGGAAACATACGGGCGAGACCCCGCATAGATGCGAGATCTGTAAGAAGTCGTTTACGAGGAAGGAGCACTTCATGAATCACGTGATGTGGCACACTGGCGAGACGCCGCACCATTGCACAATTTGCGGGAAGAAATACACGAGAAAGGAGCATCTTTCGAACCATATGAGGAGCCATACGAACGATACTCCGTTTAGGTGCgaaatttgtggaaaatcctTCACGAGAAAAGAACATTTCACGAACCACATAATGTGGCACACCGGGGAGACCCCACATCGATGCGATTTCTGCTCAAAGACGTTCACCAGAAAAGAACACTTACTGAATCACGTTAGGCAACATACTGGAGAATCTCCGCACAGGTGTGGGTTCTGTGCCAAGTCTTTTACCAGGAAAGAGCATTTGATCAATCACGTTAGGCAGCACACAGgtgaaACCCCATTTAGGTGTAATTTCTGTCCGAAAGCCTTCACGAGAAAAGACCACCTTGTCAACCACGTTAGACAACACACGGGAGAGTCCCCACATAAGTGTACTTTCTGCACCAAGTCGTTCACCAGAAAAGAGCATCTGAACAACCACGTCAGGCAGCACACAGGCGAATCGCCGCATAGGTGCCATTTTTGTTCGAAATCGTTCACCAGGAAGGAGCATTTAACAAATCATGTTAGAATACATACAGGCGAATCGCCGCATCGTTGCAGTTCTGTCAAAAAAACGTTCACGCGCAAGGAGCACCTGACCAACCATCTGCGGCAGCACACAGGCGAGACGCCGCATTGTTGCAATATCTGCTTCAAGCCGTTCACCAGGAAAGAGCACCTCGTCAACCACATGAGATCACACACACGGCGAACGACCCTTTGCATtgtgaatgtttttatttgtatacagGCGTTCGCACAGCGGCAGAGGCCCCACGGCTGCCCCGAGTGTGGTAAGACGTTCGTGGAGAAGGGCAACATGCTGCGCCACATGCGAAAGCACGCCGCCGAGAACGGAACGGGCCTACCGGTAAACACGATTCCCAGTCAACAGGTAAATGCCACGCAACAGCCGCAGGGTAACCCACAGCAACAGCAGCAGCAGCAACAAGGTAATCCGCAACAGCAACAACAGAATGCGCAGGGGAATGCGGGAAATATCCAGATACCACAAGTGCAAGTTAGCCAGCCTCAGCAGCAGCAGCAACAGCACCAGCAAAATTCTAGCAATAACGTCGTACAGACGTCGCACCTGCCTATGCACCCGCCTAACAGTCATTCTGTTGTTGTGCCGACGGCTAACGTGCTGGCTTCTTATTAG
Protein Sequence: MQEQELVKTLGVEMVQNMYKVNVDDLNQLLAYHEIFGKLQGGQGELSNPNQNVVQNNSNNNMNIQQNTGNIAIVTKDEQEASTSNISGDGTPTVGTHVCDLCGKMFQFRYQLIVHRRYHIERKPFTCQVCGKAFSNAQELTRHGKCHLGGSMFTCAVCFHVFANAASLERHMKRHSTDKPYGCTICGKSFVRKEHLDNHTRCHTGETPYRCQFCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCTICGKKYTRKEHLSNHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCAKSFTRKEHLINHVRQHTGETPFRCNFCPKAFTRKDHLVNHVRQHTGESPHKCTFCTKSFTRKEHLNNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCSSVKKTFTRKEHLTNHLRQHTGETPHCCNICFKPFTRKEHLVNHMRSHTRRTTLCIVNVFICIQAFAQRQRPHGCPECGKTFVEKGNMLRHMRKHAAENGTGLPVNTIPSQQVNATQQPQGNPQQQQQQQQGNPQQQQQNAQGNAGNIQIPQVQVSQPQQQQQQHQQNSSNNVVQTSHLPMHPPNSHSVVVPTANVLASY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -