Basic Information

Transcription Factor Domain

TF Family: CSRNP_N
Domain: CSRNP_N domain
PFAM: PF16019
TF Group: Unclassified Structure
Description: This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 0.38 4e+03 -1.7 0.3 88 103 97 112 67 133 0.45

2 3 1.2e-08 0.00012 22.8 0.3 2 28 167 193 166 195 0.94

3 3 5.6e-38 5.9e-34 118.7 13.1 85 217 201 330 194 331 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	0.38	4e+03	-1.7	0.3	88	103	97	112	67	133	0.45
2	3	1.2e-08	0.00012	22.8	0.3	2	28	167	193	166	195	0.94
3	3	5.6e-38	5.9e-34	118.7	13.1	85	217	201	330	194	331	0.91

Coding Sequence: ATGGAGGACTTGAGGATAAGCCCcatatttaaaacagaaaataatatgAGAAGGATGCCTTCACTAACTATGAAACTAGAGCTAACAGAGGAAAATCTTGATTATTTTCTTCAACAAGAATATTCCCTATCGCAAATGTGCTATGAAGCAGATCGGTTAAGCTTAGATGGTTTAGATGACCTTTGGACTCCTCAAGTTTTACCAAAGCCTGAAAAATCTTACAGTGATAAAAAAACTGTGATGTTAGATATAATTAATTCCGAGAGTATTACTTCAGAATGTTTGACTGATAAAGAAACGCTAAATGAAGATGAAAAAATGGAAATCGATCAAGAGAATCAACTTTTGGAACAAGAGGAATTAGATAAGGTGCCATTTAAAGTATTAAATAAAAGCAGCCTTAATGGTCCTCATTATGAAAATCCAATTAATGCAATACCTGCTAAAAGTAAtctgaaaaaacaaatatcaccttttgaaaccaagaaaaacaaaGAACAAAAATCATCTCTTACTTTTACTACTGTAACAACATTTTACTTTGAAAGATCCCAAGGATTTAGTTCTGTACCTTCAAAAGATCTTTATGAgaataaaaaacatgaaaatgacCTACCCAAACGTAGAACAAACAGTATATATCAAAAAAAGACTGACTCGCAAGAAAAGTTACAAATTGTTCAAGCACTAAACATAAACCAAAGAGTTCAACTATTACAGTCTGCAGAAGTACAAATACAACTTAACGAAGAAGAAGACTGTGACTATTTACGTTTCTCAAGGGCTTTAGTAGGATGTGATTGTAAAGAATATTGCTATCCAGATATTTGTAGTTGCAGTTTAGACGGAATCGAATGTCAAGTAGATCGACCTAATTTTCCTTGTGGTTGTTCGAAAGAAAATTGTAGAAATGTTATGGGAAGAAATGAATACAGTCCTAATAGAGTTAAAACACATTGTTCAAAGACTATAAGGAGAATGAAAATGGAACATAAAGGAAGGATATCAAAAAGAAAGCAGATGTTGCCATCCAAGTTGTTATTATCAATATAA
Protein Sequence: MEDLRISPIFKTENNMRRMPSLTMKLELTEENLDYFLQQEYSLSQMCYEADRLSLDGLDDLWTPQVLPKPEKSYSDKKTVMLDIINSESITSECLTDKETLNEDEKMEIDQENQLLEQEELDKVPFKVLNKSSLNGPHYENPINAIPAKSNLKKQISPFETKKNKEQKSSLTFTTVTTFYFERSQGFSSVPSKDLYENKKHENDLPKRRTNSIYQKKTDSQEKLQIVQALNINQRVQLLQSAEVQIQLNEEEDCDYLRFSRALVGCDCKEYCYPDICSCSLDGIECQVDRPNFPCGCSKENCRNVMGRNEYSPNRVKTHCSKTIRRMKMEHKGRISKRKQMLPSKLLLSI

Sequence clustering based on sequence similarity using MMseqs2