Basic Information

Gene Symbol
Ncor1
Assembly
GCA_029963825.1
Location
JAPWTJ010000263.1:111698-120628[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.8e-08 6.9e-05 23.7 0.0 3 43 485 525 484 527 0.97

Sequence Information

Coding Sequence
ATGATAGCATTGACCCTTGCGGAGCGTACTCCGGTGGGCGTGGCCATGCCGACCTACTGCGCATTGGTGGTGGGAGAACTCGCGTCGCGATTCGACGTCTGCCGTCGGCCATCTTTTGACGTACCGCGGTACTGGCTGTCGGAGGGAGATAGAGGCAGAGGATGGCGCGTTAGATTGGGGTTTAGTAACGAGACCCAACCACAGTCAAGCCTCGCACCCGACAGTCGACCTATACAAGCCGTCGAGGTCCCCCCTATCGACGGCGCGCTACCCCTACCCCGCCTCCCCGCAGCTGCAACAGCCCGGCGCCACCATCGGCGGCCAGGTGCAGGCGTCGCAACGCTATCCAGCGCAGACGCCTCCAGCTGGCGCGACCGCCACGTCGGCGGCAGCGGCGCCGCAACTGCTCTCCAGCGTCTACAGGGACTTCCGGCCGAACAGAATATCGCTGCTGCATCCCGAATACGGACCCGGACGGCCTCGCGAGCCGTCCATACAGACGACGGGCATCGTCTGCGTCGATGGACTACAGGGGGGCAGCAACCGCTGAAGAAGATCCGGCTGCAGGACAAGGAGGGCGTGCAGCCGCTCAGGATTGATACGCGGGAACAACCCGGCACGTACAACCCCCAGGTGGAGGCCATATCTCCCACCCTACCCGACCAGCTAACCCAAGACGACCAGGCGTTCAGGACCACCAAGGATGAGCTCATCCAACAGATCGGAAAGGTGGACAGGGAGATAGCGAAAGCTGAATCGCAGATAACCATCTTGAAGAAGAAGCAGGCGGAACTAGAGGAAATTGCCATCAAACCGTCCGTCAAACGGGAAGTAGTAGAGGATGCCGCGCCCAAACATCAGAGCCTTCCGCAGAAGATCTATGCGGAGAACAGGAAGAAAGCCCAGAGCGCGCACGCGCAGCTCGACCCGCTGGGCCCCAAGGTCGAATGGCCGCTGTACAACCAGCCGAGCGACGCGCCCGTCTACCACGAGAACAAGCGGAAGCACGTGGCGTTCAAGCGGCGGCTGTTGGATTACTTCAAGAAGAGGCACACGGAGAAGGAGCAGAGGAACGCCTACCTGACGGAGACGTACAGCAAGATGATGCAGGAGTGGCTGAGGAAGGTGGACAAGATCGAGTCGAGCACCAAGCGGAAAGCCAAGGAGGCCAAGAACAGGGAGTTCTTCGAGAAGGTGTTCCCGGAGCTGAGGAAACAGCGGGAGGATAAGGAAAGGTTCAACAGGGTGGGCGCCCGCGTCAAGTCCGAAGCGGACATGGAGGAGATCATGGACAACCTCCAGGAGCAGGCGATGGAGGACAAGAAGATGCGCAGCTACGCTGTCATACCGCCCGTCATCCTGGACCAGCGCCAGCGCCACATCCGCTACCAGAACAACAACGGCTACCTGGAGGACATGGAGGCCGCTTACAAGAGCAGGCAGTACCTCAACGTGTGGACGCCCAGCGAGAAGGAGGTCTTCAAGGAGAAGTACCTGCAGCACCCGAAGAACTTTGGCGTTATAGCGTCCTATCTAGACAGGAAGTCGGTGGCCGACTGCGTGCAGTACTACTATCTGAGCAAGAAGACGGAGAACTACAAGCAGCTCTTCAGGAAAGCCAGGCAGCGGACGAGGAGTTCGAGGAATAACACCCAGAAGGTGCCCACCAATGCCAGCACATCGGTCGTGGATATCCTGACCTCCGGCGTGACCACGCGCCTGCAGCGCGAACAACAATCAAAGACGGTGGGCCCTCCGACGCGGGACTCCCATCCCGCCGAGCAGACGACGTCGACGACCCCGCCCGCCGCAACGACGACGTGCGCGTCGGTTTCCAGCCCCCCGTCCTGCAGTCccacgacgacgacgacgacccCCACCACCACCTGCACCACGGCGCCGTCCACGTCGCCGGCGCCGCGTTCCGATACACCCGGCGCCGCTGCCACGGCGACGACGACGCCGGTGTCGAACTGTGTGTCAGCTAGTACTTCTGTGATTTCGAGTAGTTGTAGTGGGGCAGCGCAGGACGCGACGTGCGCGCAGTCCGAGAAGGAGACGCCCATGGACACGTCTTCGTCGTCGGAGGAAGTTAAGGCGAAGGGTTTCGCGGGTGGCGGTGCCGTGCAGCTCGAGGGTGGTAAGTTCTTTGGAGATGAGGGCGCCAAGGATGGAAGCATGGCCTTGGACGCACAGAAGACTGGGGTGATGGCGGATGGAGTCGCGGTCAAGAAGGAGGTGGAGTCGCCCCATGAGAGCGTCAGTGACCAAAATGTGGGCTGTAACGCCACAGTGATGGAGAACAAGAAGAAGAAGGAGAGGAGGAAAGACAAAGATGCAGCTATAGAGACCAGTGACGAGGAGGCGAACTGTATACAAGctgGAAATATAATTCACACTATGATTTGA
Protein Sequence
MIALTLAERTPVGVAMPTYCALVVGELASRFDVCRRPSFDVPRYWLSEGDRGRGWRVRLGFSNETQPQSSLAPDSRPIQAVEVPPIDGALPLPRLPAAATARRHHRRPGAGVATLSSADASSWRDRHVGGSGAATALQRLQGLPAEQNIAAASRIRTRTASRAVHTDDGHRLRRWTTGGQQPLKKIRLQDKEGVQPLRIDTREQPGTYNPQVEAISPTLPDQLTQDDQAFRTTKDELIQQIGKVDREIAKAESQITILKKKQAELEEIAIKPSVKREVVEDAAPKHQSLPQKIYAENRKKAQSAHAQLDPLGPKVEWPLYNQPSDAPVYHENKRKHVAFKRRLLDYFKKRHTEKEQRNAYLTETYSKMMQEWLRKVDKIESSTKRKAKEAKNREFFEKVFPELRKQREDKERFNRVGARVKSEADMEEIMDNLQEQAMEDKKMRSYAVIPPVILDQRQRHIRYQNNNGYLEDMEAAYKSRQYLNVWTPSEKEVFKEKYLQHPKNFGVIASYLDRKSVADCVQYYYLSKKTENYKQLFRKARQRTRSSRNNTQKVPTNASTSVVDILTSGVTTRLQREQQSKTVGPPTRDSHPAEQTTSTTPPAATTTCASVSSPPSCSPTTTTTTPTTTCTTAPSTSPAPRSDTPGAAATATTTPVSNCVSASTSVISSSCSGAAQDATCAQSEKETPMDTSSSSEEVKAKGFAGGGAVQLEGGKFFGDEGAKDGSMALDAQKTGVMADGVAVKKEVESPHESVSDQNVGCNATVMENKKKKERRKDKDAAIETSDEEANCIQAGNIIHTMI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-