Basic Information

Gene Symbol
-
Assembly
GCA_029963825.1
Location
JAPWTJ010001650.1:47913-51255[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 7.3e-05 0.1 13.5 2.5 4 46 77 133 74 133 0.92
2 4 0.0015 2.2 9.3 1.6 1 45 174 232 174 233 0.86
3 4 1.6e-05 0.024 15.6 0.8 3 46 304 361 303 361 0.86
4 4 0.0037 5.3 8.0 0.2 23 45 469 495 455 496 0.83

Sequence Information

Coding Sequence
atggaACCTCTTGAAATTTATGATTCAATTAATAATAAGACGATAAACGTTTTTGTAACTTCCGAAGTTGCTGAAAAGTGTCGTGCagACCATGTTTTTGCCCAAGACTTGTTCAATAAACTACAAGATAGTAACGTTGAGGATGGTAGTGCTGTAGAGATAGATACCATAAAAACGGAAGTCAATGACGATTCTGTTGAAGAAGATCAAAGCGAATATAAAGAGATATGGAACAGACGTGAAACTTTGAAATTGATTAAATCATATCAAAAGCATAAAGACAAATTTGACGAATATCCTCAGAAGAGAAGCGTTTGGAATATAATTGCTGACGAATTGGCACATCAGAAGGTTTATAAAACTAGTGAAAAATGTGCTGAAAAGTGGAAAAATCTACTACGGTCATATAAAAGTGCAAATCAAAGACGATCTGCTACAAGCccgaagaagaagaaaaaaatggcatttacacCACAATTCGTTTCCCCAAAATCAGTTATTTTCGATGAATCTACTGAAAAAGAAACTTGGTCTAAGCTTGAAACTCTGAAGCTGTTGAAAGCTTTTCAAAATCAAAGGGACCGTAAAGAGATCTCAATAAAGGAAAAACGATTTTGGTCAGAAATTTCTGTAGAATTAGCAAAGGACAATATATATAAATTGCCAGAAAAGTGTGCCACAAAATGGAAGAATCTTTATCGCAGTTACAAGAAAAATATTGAGCGGCCGTCAGTATCACCAAGATTCCACTATTTTCAGGAGGTTAATGATGTTCTGAACAATGTCGAATTAAGCGTTCCTAGTGATGCTGGcgaagATGATACGGATTTAGAAAAAATGCTGAATCCCCAACAGTTCAAATCTTTTATAGAAAAGTCCAGTCTACAATCCAAACCTAAAGATATTGTTACTTGGACAGCTGATGAAACTATGAAGCTCATCAAGTCATACAAAAAACACAAACGCAGGTTTAGAAACTGCCCCACTAAGAGACATGTTTGGGCCATTATTTCTGCAGGTCTTATTAAAGAAGGCCTTCTCAGGGATGCAGagaagtgtgaaaataaatggaaaagttTGTTGCGCTCCTATAAGAGAACTTTAGAAGTAGGAGAAAAGGGTAGGTTTTACTTCTTTGAGCAAGTTGCAGATGCTTTAAAGGATGACAATGAGAGTGAAGTATCAACAACTCGAAATGATATATCAGTTGAATATGAAAACTACGAAACATTAGATGATAATACTTTAGGCAACGACAACATAGAAATTTCAGAAGAGGAAGAAAATGATGATGGTGATACTACAGCATATgaagaaataataatacaaactgAGTCAGATCAGTCTACCGAACACTCTGAAGTTACTAAACATTGGCCATCTAATGAAAGGACAGCAGAGATGTGGAAGGAAATATCCCAAGAACTCCAGTctcaaaatatatacaaatcACCTGAAAACTGCGAAACACAATGGAAAAACATATTTGAGATGTACAAAGCATCCAAACTGAACAAAACTGGATCTGATCGATTTGTATTCTTCAAGGAAATGGAGGATTTGCTCAAAGTAAAATCTGAAGAAACAGTCCCAGCTGTGGACGATATGCCTAACAAGAAATGCAAGTACACGGAAAAAAAAGATGCTTGA
Protein Sequence
MEPLEIYDSINNKTINVFVTSEVAEKCRADHVFAQDLFNKLQDSNVEDGSAVEIDTIKTEVNDDSVEEDQSEYKEIWNRRETLKLIKSYQKHKDKFDEYPQKRSVWNIIADELAHQKVYKTSEKCAEKWKNLLRSYKSANQRRSATSPKKKKKMAFTPQFVSPKSVIFDESTEKETWSKLETLKLLKAFQNQRDRKEISIKEKRFWSEISVELAKDNIYKLPEKCATKWKNLYRSYKKNIERPSVSPRFHYFQEVNDVLNNVELSVPSDAGEDDTDLEKMLNPQQFKSFIEKSSLQSKPKDIVTWTADETMKLIKSYKKHKRRFRNCPTKRHVWAIISAGLIKEGLLRDAEKCENKWKSLLRSYKRTLEVGEKGRFYFFEQVADALKDDNESEVSTTRNDISVEYENYETLDDNTLGNDNIEISEEEENDDGDTTAYEEIIIQTESDQSTEHSEVTKHWPSNERTAEMWKEISQELQSQNIYKSPENCETQWKNIFEMYKASKLNKTGSDRFVFFKEMEDLLKVKSEETVPAVDDMPNKKCKYTEKKDA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-