Mmin027754.1
Basic Information
- Insect
- Molorchus minor
- Gene Symbol
- -
- Assembly
- GCA_029963825.1
- Location
- JAPWTJ010003200.1:16281-16613[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-07 0.00014 22.3 0.0 2 37 17 52 16 57 0.94 2 2 2.3 2.1e+03 -0.7 0.0 23 31 99 107 99 107 0.80
Sequence Information
- Coding Sequence
- ATGGATAATCAGAAGAACAAGGAAAAGCGAAACTATTGTAGCTGGACCTCAGAAGATATGGACCATGCCATAACAGCCTATAAAGAAAATCACTGTGGTTTTAACGAGTGCTGCAGAAGGTACAATATTCCAAAACCCACATTTAGAAGACATTtacattctttaaataaaaaagcaaatgATGAAGTTCAGTGTATGGGTCGCTCCACTGTTTTTGATGCCAAAATTGAAAGGGACCTGGCAGAGCATATACTACGGTTAGAGGAGAGATTTTTTTGGTGTAACTATAACCGATGTTCGTCGTTTGGCATTCCAGATAGCTGTTCGGAATAA
- Protein Sequence
- MDNQKNKEKRNYCSWTSEDMDHAITAYKENHCGFNECCRRYNIPKPTFRRHLHSLNKKANDEVQCMGRSTVFDAKIERDLAEHILRLEERFFWCNYNRCSSFGIPDSCSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -