Mmin023209.1
Basic Information
- Insect
- Molorchus minor
- Gene Symbol
- -
- Assembly
- GCA_029963825.1
- Location
- JAPWTJ010001844.1:21081-22493[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1e-08 9.2e-06 26.1 0.0 3 38 29 63 28 68 0.88 2 3 4.8 4.3e+03 -1.7 0.0 5 19 262 277 261 279 0.69 3 3 8.4 7.6e+03 -2.5 0.0 14 21 343 350 336 352 0.76
Sequence Information
- Coding Sequence
- ATGATGGTTAGAAAACAAGGTCAAGATCGATGTGGGATAGTCAGAAATTACCAGAGAAAGACCATACGTAAGAGTTGGAGTATTGAACAACTTAATAATACTATAACTGCTATTCGTTCAGGCACTAAAATACGTAAGGCGGCTAAAAATTTCGATATTCCGGAATCAACTCTGCGTGATTATTTAAAACCAAGAGGCGATGGCGGTCGAGTTCCAATTGAACCTGCTCCAGAGGCTTATGGTTTAGGAAGGAAACCTCTTTTCACGAAACAACAAGAGCAAGAGTTAGCAGATCACGTTATGAAGTTAGCAAATTTGTTCTACGGAGTAACTCCACGGGAGTTGAGACGAATAGCTTTTGATTTCGCAAAGGCTAATCATTTAACCCATACGTTCAACAAGGAAATTCAACTAGCTGGCAAAGATTGGCTGAGGTGTTTTTTGAAGAGGAATCCCCAACTAAGTCTTCGTCAGCCAGAAGGCACAAGTATTAACCGTATATCGTCATGCAATGCTGAATCTGttggaatttttttcaaaaatcttgaaaatgttttaACCAAACAGGCATATAAAGGAGACAGGATCTTCAATGTAGATGAATCTGGTATAACTACTGTCCAGAAAAAGTCCGAAAAAGTCTATGCGAAGAAGGGACAGAAACAAGTCGGTGTTGCAATTTCAGCCGAACGAGGACAAACTATCACCATTATAATATGTGCTGTCAGTGCAGCTGGTTCATACGTCCCGCCAATGCCTCTCGATTTAACATTCTTTGGACCCCTTAAAAAAGCGCTCTTTGCTGTCTATGATTCTCATATGCTTTCAACTGCGCACGAAAAGATCACAGTGTACGATGTGGCTCGTTTATTCAATCAACCATACATAAAGGTAGCAACTATGGACAGAGGAATATCAGGATTCAGAGCTGCTGGAATATTCCCTTACAACCCCAGTAAGTTTACAGCAGAAGACTTAGAACCAGCTGAAGAATTTCGAGAACTTGTTTTGCATGTTGAATCAGAAGAAGGGGAAATGAGCTTGAATTTCGCTTCTCCTCAGACTCGGATACCTTAA
- Protein Sequence
- MMVRKQGQDRCGIVRNYQRKTIRKSWSIEQLNNTITAIRSGTKIRKAAKNFDIPESTLRDYLKPRGDGGRVPIEPAPEAYGLGRKPLFTKQQEQELADHVMKLANLFYGVTPRELRRIAFDFAKANHLTHTFNKEIQLAGKDWLRCFLKRNPQLSLRQPEGTSINRISSCNAESVGIFFKNLENVLTKQAYKGDRIFNVDESGITTVQKKSEKVYAKKGQKQVGVAISAERGQTITIIICAVSAAGSYVPPMPLDLTFFGPLKKALFAVYDSHMLSTAHEKITVYDVARLFNQPYIKVATMDRGISGFRAAGIFPYNPSKFTAEDLEPAEEFRELVLHVESEEGEMSLNFASPQTRIP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -