Mmin018942.1
Basic Information
- Insect
- Molorchus minor
- Gene Symbol
- -
- Assembly
- GCA_029963825.1
- Location
- JAPWTJ010001182.1:20424-20876[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.3e-09 1.2e-06 28.9 0.0 3 37 20 55 18 61 0.88 2 3 2.3 2.1e+03 -0.7 0.1 25 37 84 97 83 101 0.82 3 3 2.4 2.2e+03 -0.8 0.0 16 26 131 141 128 141 0.90
Sequence Information
- Coding Sequence
- ATGCCACGCGTATACAAAAGAAGAATTGACGCACGTTATTATAAAAACTACACAGGCGAAAAATTAGAGGAAGCCCTCAGCGAGATCCGAAACACGAAAATATATTTCCGTAAAGCAGCCGAAAAGTATGGAATTCATAAAAATACTCTTTGGCTTAAGCTAAAGGGAAAACACCAAAAGTTACATGGACAACGAGTTTTTACTGAGCAAGAAGAAAATGCTTTTGCTGTTCACATAGTTACCATGTCGAGATTTGGATTTCCAGTGACAACCTTTGATCTTAGATATGTGGTAAAATCTTATTTGGACCGAAGGGGCAGAACAGTTACatgtttcaaacaaaatatgcCTGGAATTGATTGGATGAATTTATTTCTCATGCGACATCCACAACTGTCTCAAAGATTTGCACAAAATATATACATGCTAGAGCTGCAACTGATGAAGAAATAG
- Protein Sequence
- MPRVYKRRIDARYYKNYTGEKLEEALSEIRNTKIYFRKAAEKYGIHKNTLWLKLKGKHQKLHGQRVFTEQEENAFAVHIVTMSRFGFPVTTFDLRYVVKSYLDRRGRTVTCFKQNMPGIDWMNLFLMRHPQLSQRFAQNIYMLELQLMKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -