Mmin003948.1
Basic Information
- Insect
- Molorchus minor
- Gene Symbol
- -
- Assembly
- GCA_029963825.1
- Location
- JAPWTJ010000087.1:81751-82086[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.4e-11 3.1e-08 34.0 0.0 3 40 19 56 17 59 0.91 2 2 0.0084 7.6 7.1 0.0 21 36 79 95 77 101 0.87
Sequence Information
- Coding Sequence
- ATGGGAAAACACAAAAGACTACTAGGTAGCCGGAAGTACCGGGATTACTTGGAAAACACTCTAAATGATGCTCTGGCTGCAGTCAGGGGTGGCATGAGTTCAAGAGAGGCAGAAAGAAGTTTTGGAATACCCCGCCgcacgttattaaataaaataaaagaccgACATCGAGGCACAGTCGGTCATCCTACTGCTCTTAGTGTAGTCGAAGAACGGCATTTAGTAGATGTGATCAAGGCAAGTGCTGAATATGGCAGTCCAATGACAACTCTTGAAATAAGAATGCTCGTGAAGTATTATTTAGACAAAAAGAGGCACAAAGTCagctgtttttaa
- Protein Sequence
- MGKHKRLLGSRKYRDYLENTLNDALAAVRGGMSSREAERSFGIPRRTLLNKIKDRHRGTVGHPTALSVVEERHLVDVIKASAEYGSPMTTLEIRMLVKYYLDKKRHKVSCF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -