Mmin004697.1
Basic Information
- Insect
- Molorchus minor
- Gene Symbol
- Mblk-1
- Assembly
- GCA_029963825.1
- Location
- JAPWTJ010000110.1:132231-134926[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 8.6e-18 7.8e-15 55.1 0.0 1 44 11 55 11 56 0.94 2 3 1.3e-18 1.2e-15 57.7 0.0 1 43 363 406 363 408 0.95 3 3 5.8 5.2e+03 -2.0 0.2 16 24 449 457 449 458 0.85
Sequence Information
- Coding Sequence
- ATGTCCACAGTCGCCGGCAGGAGAACATACACCGAAGATGAACTCCAAGCAGCCCTGAGAGATATCCAATCGGGCAAACTGGGCACCCGTCGGGCGGCGGTCATCTACGGAATTCCCCGATCTACCTTGCGTAACAAAGTATACAAACTTGCCTTAGAAAGGGAGAGAGAATCACACCTAAACAGTTCCACTCCCATCAAACTGGACGAAGAAGAAGTTATGGACGACGACAAAGAGCTGTCCGGTGCCGAAGAAGAAAAGGAAGTAGAGAAGGCTTTACAGGCCCCTCTGCTGTCAATGGCCGATTTGTTTAGGTTTACCGGAAGAGACCCAGAAGCGTTGAGGATGCTTCTACAGAAGGGCAAGGAAGGGCAGGATATATGGGGAGGTATGGACCACAGCGAAGTAGGACCATATATCCAAAATATACTCATAGCTTCTCAGAACCTCCTGTCGAACCAAAAACCCTCAGAAAGTACGGTGATAAACCAAATGGTGCCGGAATTCGTAAAACGGATGATAGCCGAAGAACAACTCTTAAAGATCCAAAATAACAACGGCGACATGGACAGGCTAACCAGGCCAAGTCCAAGCAACTCGGTCGTCTGTAAAATAGAAAAACCCAAGTCAGAATCCGACATGGAAACGGAGGACTCCCCCTCGAATGTGATACTGAAAATTCCGTCCTATAAACCGACGACGTGCAAGAACGGTAGTGACCTTTTCAGGTGTTCGGTGGAATCCACCGGGAGTATGGTGTCGCCCCCGGTAACAAGCGAATCGGGATCTCCGCCAATTCTACCCGGAAAGGGACTTATTATAAAAGACGTCAAGGATGTGATAGCTCAGAGTATCAGCCAGAAGTTTCAGCAGAGCTTGGAACCCAGGAGGCCCATCATTGACATTGATTTTAAGAGGGGCGGATTTACGCCGCCACTGGGCTCCGGTATCTCTGTTATAAAGACGCAGCAGGATATTGGTAGGCCGTACCAGCAGCAGCCACCCAAACCTCAAAGTACAAACACCGGAACTACGACGACCGGTGGTAAAGGTACCAGACCAAAAAGAGGCAAATATCGCAACTATGACCGCGACAGTTTGGTGGAAGCAGTACGGGCGGTACAAAGGGGAGAAATGTCCGTCCACCGTGCGGGCAGCTATTACGGCGTACCGCATTCCACCCTAGAATACAAAGTCAAAGAAAGACACCTGATGAGGCCACGAAAACGTGACCCCAAACCTAACCCAGTCGATGAAAAAATTGCCAGTCTAAAACAGAACGACCTCCGAAACGCGcaagaaaaaaatgaaaccCATGATGAAACCCCCTCAAAAGTTCCCACCCAGCTCTCCCAACGGCATGCCCAAACTGCCGATATTCGAACCTGGAATGGCCCCTCTCGCGGGGTACAACGCCCCACCGTTCCCCTTCTGGCCGCACCCAGGTTTCCCGCACATTCCCCTGGATTACGCTAG
- Protein Sequence
- MSTVAGRRTYTEDELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLALERERESHLNSSTPIKLDEEEVMDDDKELSGAEEEKEVEKALQAPLLSMADLFRFTGRDPEALRMLLQKGKEGQDIWGGMDHSEVGPYIQNILIASQNLLSNQKPSESTVINQMVPEFVKRMIAEEQLLKIQNNNGDMDRLTRPSPSNSVVCKIEKPKSESDMETEDSPSNVILKIPSYKPTTCKNGSDLFRCSVESTGSMVSPPVTSESGSPPILPGKGLIIKDVKDVIAQSISQKFQQSLEPRRPIIDIDFKRGGFTPPLGSGISVIKTQQDIGRPYQQQPPKPQSTNTGTTTTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDPKPNPVDEKIASLKQNDLRNAQEKNETHDETPSKVPTQLSQRHAQTADIRTWNGPSRGVQRPTVPLLAAPRFPAHSPGLR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -