Basic Information

Gene Symbol
ct
Assembly
GCA_029963825.1
Location
JAPWTJ010000072.1:285067-306700[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2.7e-28 2.9e-24 85.7 0.0 2 75 289 363 288 366 0.95
2 3 3.3e-32 3.5e-28 98.2 0.0 2 76 690 765 689 768 0.95
3 3 1.4e-30 1.5e-26 93.0 0.0 3 75 901 974 899 978 0.95

Sequence Information

Coding Sequence
ATGAAGGCATTAGTGTCGGCAGGAATAGAAAGAACCAATATAAATCAGTTATTAGAAGAGGTCCAGAGGCTCCAAGGATGCATAGCAAAATTACAAGAATCTTCCATGTCTCAGATCAGTAGGTTAGAAGACCAATTAGAACAGAAACGACAGCACATTATAAGACTAGAGAACAAATTAGACTCGCAAAAGGATTATGACGATCTCAAAAGAGATGTCAGCATATTAAGGTCAGATCTCACCAACAATCCTGATGGGAAAAACATCGAGTTATTACTGGAAAAATCCAAGAACTTAGCGCTAGAAAACAGGGACAAATCCCCGTCAAGGGAAATcgaagAAGTAGGTTCTATCCCGGATATCGGTCCGAGCCAGGAGACTCTCGAACTCTTCCATCTCCGAGTACCTGATGAGGGTATTATAAAGGAACGTCTTGTTGCAAATTTCTCGATGCCGCGATGGGCCAGCGAAGAGCACCACCCCCGTGATCGCCGATTCGACGGCGGAGAAGAGCACGGCGTCCACCCCCAGCTACACGAGCAGTCCAGCCAATCGTCGCCGGTCGAGAATCTGGTCAACGGCAACCCGAAGAGTCCCCAGGAGGACAACAACAACCACCATGTCAGTAACAACAACATTCCCCTTAGCGCGACCATGTGCGCCGTCAACAACTTCCTGAGGAACGACGATCTGAAGAGTACGTACAGGTTCGAGGACCACAGGACGCCCTTCAAGTTCGCGGAGGAGTTGGGGATGCCGCCCGGGTCTATGGTGGGCAGGCTCGGGGAAAGCCTCATCCCCAAGGGAGATCCAATGGAGGCCAGGCTGCAGGAGATGCTGAGGTACAACATGGACAAGTACGCTTCCCAAAATTTAGACACCCTGCACATAGCAAGGAGGGTCAGGGAGCTTCTATCTATCCACAACATCGGCCAGAGGCTCTTCGCCAAGTATGTCCTAGGTCTGTCCCAGGGTACAGTCTCTGAACTCCTATCCAAACCCAAACCTTGGGATAAACTGACTGAAAAAGGAAGGGACAGCTACAGGAAGATGCATGCTTGGGCGTGCGATGAGAACGCTGTGTTGATGTTGAAGTCACTGATACCAAAGAAAGACCATTTTTCGTCAACAGGCAAATCAGAAGCGGGATTGCCGCCGTTCGGCAGGCCGGAAAACGACCTTACGGAAGAAAGGCTGGCGCACATATTCAACGAGGCCAACCAATACCAGCACATCAAACAGCAACACCAACCACCGGAGGATACGCACAGCAATGAGGATTCCAAGTCGCCGCACGGATGCGGCAGCCCGTTTTCGAGGGATTCTTCGTTGAATAAGAGACTGAAGAAGTACGAAAACGACGATATATCGCAGGATAAGGTCGTCAGGATATACCAGGAGGAACTGGCTAAGCTGATGGGAAGGCGAATGGAAGACATGCGTAATCCTAGGGAAGGAGGGTTTCCTGGTATTTTCCTCCCCCAACTATTTAGCAATCCAATGGACAGAACCCAAGAGGACATCCGCATAGCTCTTGACGCTTATCACCGTGAACTAGCCAAGTTGAATCAAGGCCAAGCCCCAACGATGCCCCTGAGTCTTTTGGCCATCCAACAGCAGGCCCTGGCACACCACCAACAGCAGCAGCAACAACAACAACACCAACACCAACAGCAAATCCCCAGCTCTAACGGCGGCGTCCAGGACCTATCCATACCAAAAGACAAGATGAAGATGATGAACGGAGTGATGGACGATAAGGATAAAGACGAGGATGCTGTGTCGCGACATTCCGGATCGGCCTTCAGCCTCGTAAGGCCGAAGATCGAGCCCGGAACTCAACAGAATACCGGTTCCACCGCGTCCAGTCCTCTGGGCAATTCTATCTTACCTCCCATGACCCCGACCGACGATTTCTCCGCGTCAGCCGCCGCTTCGCCCTTGCAGCGGATGGCCAGCATCACAAACTCCCTCATATCGCAACCGCCGTCACAGCCGCACCACAGCTCGAGTAACAGACCCTTGAAGGCCGTGCTACCGCCGATAACTCAACAGCAGTTCGACATGTACAACAACCTTAACACGGAAGATATCGTCAAGAGGGTCAAGGAGCAGTTGAGTCAATATTCCATCAGTCAGAGGCTCTTCGGAGAGAGCGTCCTGGGTCTGTCGCAGGGATCCGTTAGCGACCTCCTGGCGAGGCCCAAGCCTTGGCACATGTTGACGCAGAAAGGAAGGGAGCCCTTTATCAGGATGAAGATGTTTCTGGAAGACGACGCCGCGGTACATAAGCTTGTCGCTAGCCAGTACAAGATCGCGCCTGAGAAACTCATGAGGACAGGAGGATATGGTGGTGTCTGTGCCGCGATCGGCAAACCGATGCCGCCGACCACGAAGATGCTGTCTGAAGCGGCGGGTCTTCTTAACAAGATGCAGGAATCCCAGAACATCCTGCCGCCCTCCCTTCAGCTGGGACCGTCGCCTAGCATCAACCCACAACCGCCTCCGCCCATGATGCTTACCCCTCCGGGAGGCCTTCCGTCCCACCACGCCATCAGCTTGCAGAATTCCGAACTCCTCAAGAAATCCAACCAGAGCCCGCACGGCATTCCTCATTCGCCGATGGCGCAACAGCACGCGTCTCTGAGGAATATGCACCAGCATATGTCGCCGAGCGTCTACGAGATGGCGGCGCTGACGCAAGACCTGGACACCCAGGTGATCACCACGAAGATCAAAGAGGCCCTGCTGGCCAATAACATCGGACAAAAGATATTCGGCGAGGCTGTGCTTGGCTTATCCCAGGGTTCCGTCAGCGAACTTCTCTCCAAACCGAAACCATGGCATATGCTCAGCATAAAAGGCCGCGAACCCTTCATCCGAATGCAGTTATGGCTTAACGACGCGCACAACGTAGACAGACTTCAAGCCCTGAAAAACGAAAGACGCGAAGCGAACAAACGAAGACGATCCTCCGGACCTGGTGCGCACGATAACAGCAGCGATACCTCGTCGAACGACACCTCAGAATTCTACCATTCCAATTCACCAGGCCCCGGTCCGCCGTCGGCGAAAAAACAGCGAGTGCTCTTCAGCGAGGAACAGAAAGAGGCGCTGAGGTTGGCCTTCGCCCTGGACCCGTACCCCAACGTAGCCACGATTGAGTTCTTAGCCGGGGAGCTAGGATTATCGTCTCGAACCATCACCAATTGGTTCCACAACCACAGGATGAGGCTCAAGCAACAAGTGCCTCACGGTATGCCTTCCGACTTACCGCCTCGGGATCAAGCCGGGAGCCAGCAGCCCTTCGACCCCGTTCAGTTCAGATTGCTGTTAAACCAAAGATTACTAGAGTTATCCAAGGAAAGGATGGGCCTAAGCGGGGTGCCGCTGCCTTATCCTCCCTACCTTGCCGCCAACACAAACCTGGCGGCTTTGATCAGCCGAGGTTTGTTACCCACAGGAGACATGGACCTTTCGGCTCTCAACAGCGTTGTCAAAGAACAGATGAGCGGATTGGATCTCTCGATGACCTCCTTGAAGAGGGAACCGGGCGATTACGACGATGAGGACGACGTAGAGAGCAACGTGGGGTCGGAAGACTCCAATATGTCTGCCGGAAGCATGCACGGCGGAGAAGTAAAAATCGAACCAAAGGAAGTACCCACGAGCCAGGGTAGATCGTCGCGTAGAAAACCCGCCGCTCCGCAATGGGTAAATCCCAATTGGGAGGTCGAAAAGGAGAAACCGACCACCGGGGATGAGGTCATCATCAACGGGGTCTGTGTGATGCAAACCGGCGACGACTACGGCAGGAGGAATGCCGAAGAAACGGTTCGGATCGAACCGCAGGCCGTTCTGGATAGATTCGACGACGACCAAAGTGACGCGTCCTCCGACAGCAACGAGAACCAACAGGACAAAAGTGACGAAAAGTGCGAAGAAGAGCCGGAGAACAACGAAGAATGTGCGTTAAAACCCGATGACAGTGAGACTAAAGTCGTTAAGCATGAGAACGAGGAAGAAAGGTGGGATTACTAA
Protein Sequence
MKALVSAGIERTNINQLLEEVQRLQGCIAKLQESSMSQISRLEDQLEQKRQHIIRLENKLDSQKDYDDLKRDVSILRSDLTNNPDGKNIELLLEKSKNLALENRDKSPSREIEEVGSIPDIGPSQETLELFHLRVPDEGIIKERLVANFSMPRWASEEHHPRDRRFDGGEEHGVHPQLHEQSSQSSPVENLVNGNPKSPQEDNNNHHVSNNNIPLSATMCAVNNFLRNDDLKSTYRFEDHRTPFKFAEELGMPPGSMVGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDENAVLMLKSLIPKKDHFSSTGKSEAGLPPFGRPENDLTEERLAHIFNEANQYQHIKQQHQPPEDTHSNEDSKSPHGCGSPFSRDSSLNKRLKKYENDDISQDKVVRIYQEELAKLMGRRMEDMRNPREGGFPGIFLPQLFSNPMDRTQEDIRIALDAYHRELAKLNQGQAPTMPLSLLAIQQQALAHHQQQQQQQQHQHQQQIPSSNGGVQDLSIPKDKMKMMNGVMDDKDKDEDAVSRHSGSAFSLVRPKIEPGTQQNTGSTASSPLGNSILPPMTPTDDFSASAAASPLQRMASITNSLISQPPSQPHHSSSNRPLKAVLPPITQQQFDMYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDAAVHKLVASQYKIAPEKLMRTGGYGGVCAAIGKPMPPTTKMLSEAAGLLNKMQESQNILPPSLQLGPSPSINPQPPPPMMLTPPGGLPSHHAISLQNSELLKKSNQSPHGIPHSPMAQQHASLRNMHQHMSPSVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDAHNVDRLQALKNERREANKRRRSSGPGAHDNSSDTSSNDTSEFYHSNSPGPGPPSAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAGELGLSSRTITNWFHNHRMRLKQQVPHGMPSDLPPRDQAGSQQPFDPVQFRLLLNQRLLELSKERMGLSGVPLPYPPYLAANTNLAALISRGLLPTGDMDLSALNSVVKEQMSGLDLSMTSLKREPGDYDDEDDVESNVGSEDSNMSAGSMHGGEVKIEPKEVPTSQGRSSRRKPAAPQWVNPNWEVEKEKPTTGDEVIINGVCVMQTGDDYGRRNAEETVRIEPQAVLDRFDDDQSDASSDSNENQQDKSDEKCEEEPENNEECALKPDDSETKVVKHENEEERWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01368896;
90% Identity
iTF_01013216;
80% Identity
iTF_01013216;