Mang003486.1
Basic Information
- Insect
- Molanna angustata
- Gene Symbol
- stc
- Assembly
- GCA_963576475.1
- Location
- OY754965.1:112244-134370[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 1.7 5.3e+04 -3.9 1.6 15 19 496 500 495 500 0.81 2 12 0.18 5.6e+03 -0.8 0.4 4 10 529 535 528 536 0.88 3 12 2.2e-06 0.068 14.9 13.4 1 18 541 558 541 559 0.96 4 12 2.1e-10 6.5e-06 27.8 13.5 1 19 595 613 595 613 0.98 5 12 0.21 6.5e+03 -1.0 0.7 6 10 644 648 643 651 0.86 6 12 3.1e-08 0.00095 20.8 16.7 1 19 654 672 654 672 0.97 7 12 2e-07 0.0062 18.2 15.9 1 19 712 734 712 734 0.89 8 12 0.00046 14 7.5 8.8 1 11 774 784 774 785 0.95 9 12 6.2e-06 0.19 13.5 15.0 1 19 801 819 801 819 0.98 10 12 1.5 4.6e+04 -3.7 3.6 12 18 849 858 848 859 0.68 11 12 2 6.1e+04 -5.6 11.8 11 19 869 877 864 877 0.80 12 12 1.1e-08 0.00035 22.2 12.2 1 17 913 929 913 929 0.97
Sequence Information
- Coding Sequence
- ATGGCTGGTTGGAATGGTAATGAATATGGTAGAAATTTTCCCAACACTGATAGAGATGGCGCAGCATCTGGAGGAAGATGGCCACCTAACTACGGACAAAGACCCCCAGCGGAACCCTCCTCCACAAATCCCTATGAAATGTGTCAATATGTGGGTTTTAATGATTTTCTGGACCAATTTCAAAGGAACAAGAACTATCAGAATTATGGTACATATCCTATAGAACAGCAGCAGCAACGGCCTCTATTGAATCAATCTCAGTTTATGTCATATAGAGGTGGTGACTTGACACAGTATGAACAACAAGACTCGTCTCTTCCACGTTACCCTTACAATCCATACACGACTGAACCACGAGTGCCTTATTCTGCTAAACCTAATTATACAACATTGTCTGGTGGTTCAACTGTGACTGATGTAGATCCTAATATTGAATTTGGTTCCAGAAATGACAGCGTAGCGCTACAGCCCGTCACTTTTGTTTCAAACTTAACACCTACTGCGGAGGAGTTTGTGCCGCAAAGCGCTAGAAATTACAATACTGAAGTTGAAGGAATCAAAGAAAATGTTGATCCGCGTAATGTGACTGAACCAGTTGACGCCAGTCAGGCCGTTGAAAAGAATACTCCCCTCACTCGGGAAAAAGATAAAGCAGATTCACCGAGGCGTTACGATAGATGGAATTCACAAGATAGATATAATAATACTAACTGGCGAAGTAGAGATGAAGATACGGAGCCTCTACAAGATTCTTTTACTGTATACAACACTAACAGACATGGTCATGATGATAAAACAAATGTTAGGGAAAATTATTATTCCGGAAAATGGAATAATTCTAGAAATAAATCTAAACACTCCACTGGTGAATCCACTTCCAGAGATGATAATCTTAGAAATGGTAATGGAAAATACAATCGAAATGAAACACATTCTGTTTATAATGAACGAAACTATTCCAACGATAAGAAATGGGAATCCAatagaaattataataataaatctaaagtaagtAATGATAGACAACAACACTCCACTTATAATGAAAGTCAAGGAGATAGAAGAGAGATACAAAATGaacataaatacacaaatagaaATGATTCTATTAATACTTACAGAAATGGTTCTGAATCAGATCGCTCCAAAAATAGATCTAAAGGTTCATATAATGTCAGTGAGACATTTAGACAACGAAACTTTCCACCAAAACATGAAAATGATGTTGAATCAGATCGGGATGTTaataacaaatacaaaagaacTGGCTCTGATGAAAAGCCAACATCAAAAGaACCTGAGGATGTTGGTCAACGTGAGAGGTTAACAGATCAAGTAAACAGAGGAACCTTGGAATGTCTTGTTTGTTGTGAGAGAGTACGTCCAGCTGAGTCAGTCTGGTCATGTTCCAACTGTTATCATATTCTACATCTTCAGTGTGTACGCAAGTGGGCCAGCTCAAGTATTATTGATGGTGAATGGCGTTGTCCGGCCTGTCAACACAAAGTTGGGGAAGTACCAAAGGAGTATTGGTGTTTCTGTGGATCACGACGTTCCCCCGAATGGAGGAGAGGAGATACGGCACACTCCTGCGGTGACCCCTGTCAGAGACACACGTCCTGTGCCATACATCCCTGTACTCTGCCGTGTCATCCAGGACCGTGTCCAATCTGCAATGCCACCATACAGAGAAAGTGTGAGTGTGGTGCAACATCCCAGAGGTTGAAGTGTTCCCTGAAGACAGCGCTGGTATGCGGAGGAGTGTGCGGTAAGACCCTCAACTGTGGTGTACATACCTGCACTGCCGTATGTCACGCTGGTCCATGTCAGCCGTGTCAACAAAAGGTCCAACAGAAATGCTATTGTTTGAAAGAAGAAAAACGTGAAGTCCCATGCAGTGAGTCAAGTGTTGGAGTGGAGGGATTCTCTTGTGAACAGCCGTGTGGTAAACAACGTTCCTGTACCAACCACACTTGCTCCGAGCCCTGCCATCCTGGACCTTGTCCAATGTGTCCTCTAGATATACTCATCATCACACATTGTCCCTGTCAACGTACCAAGTTAAAGGTAGCACGCAAGTCCTGTCTGGATCCAGTGGAGACTTGTAGTAGAGAATGTTCCCGCCTATTGTCATGTGGACCAGCAGACACCCGACACACGTGCAAAGCAAAATGTCATCATGGTGAGTGCCCCCCGTGTCCTGACAAGACGGAAGTGAACTGTCGTTGTGGTCATGTGACTCGCTGGCTGCCATGTACAGATCTTGCTACACAGAGGGATACCGTGCAATGTGGAAGGAAATGCACTAAGaaaatgaGTTGTGGTCGTCATCGATGCAAAGAGACATGTTGTGTGGAGACAGAACACATCTGTCTACTTCCTTGCACTCGCACACTATCATGTGGACTACATAGATGTCCAGATACATGTCACAGGGCACACTGTCAACCTTGTTCTAGGATCAGTTTCGAAGAGTTGCGTTGTCGCTGCGGCGTGTCAGTTCGCTATCCTCCTGTAGAATGTGGGGCACGTCCCCCAGCGTGCACTCAGCCGTGTCCCGAGGTGCGTCCCTGCTCCCACCCCCCTCTACACTCCTGTCACCCACACCCTTCCCCCTGCCCACCGTGTACTGTACTCACCACCAAGTACTGCTACGGGAGACACAAGATGCGAAAAACAATTCCGTGTCATCAAGAAGAATTCTCATGTGGGTTGGCATGTGGTAAAGAACTGTCATGTGGTCGACATAAATGTCAGGAACAATGTCACAAGGGAGACTGTCCAACTgtgtaa
- Protein Sequence
- MAGWNGNEYGRNFPNTDRDGAASGGRWPPNYGQRPPAEPSSTNPYEMCQYVGFNDFLDQFQRNKNYQNYGTYPIEQQQQRPLLNQSQFMSYRGGDLTQYEQQDSSLPRYPYNPYTTEPRVPYSAKPNYTTLSGGSTVTDVDPNIEFGSRNDSVALQPVTFVSNLTPTAEEFVPQSARNYNTEVEGIKENVDPRNVTEPVDASQAVEKNTPLTREKDKADSPRRYDRWNSQDRYNNTNWRSRDEDTEPLQDSFTVYNTNRHGHDDKTNVRENYYSGKWNNSRNKSKHSTGESTSRDDNLRNGNGKYNRNETHSVYNERNYSNDKKWESNRNYNNKSKVSNDRQQHSTYNESQGDRREIQNEHKYTNRNDSINTYRNGSESDRSKNRSKGSYNVSETFRQRNFPPKHENDVESDRDVNNKYKRTGSDEKPTSKEPEDVGQRERLTDQVNRGTLECLVCCERVRPAESVWSCSNCYHILHLQCVRKWASSSIIDGEWRCPACQHKVGEVPKEYWCFCGSRRSPEWRRGDTAHSCGDPCQRHTSCAIHPCTLPCHPGPCPICNATIQRKCECGATSQRLKCSLKTALVCGGVCGKTLNCGVHTCTAVCHAGPCQPCQQKVQQKCYCLKEEKREVPCSESSVGVEGFSCEQPCGKQRSCTNHTCSEPCHPGPCPMCPLDILIITHCPCQRTKLKVARKSCLDPVETCSRECSRLLSCGPADTRHTCKAKCHHGECPPCPDKTEVNCRCGHVTRWLPCTDLATQRDTVQCGRKCTKKMSCGRHRCKETCCVETEHICLLPCTRTLSCGLHRCPDTCHRAHCQPCSRISFEELRCRCGVSVRYPPVECGARPPACTQPCPEVRPCSHPPLHSCHPHPSPCPPCTVLTTKYCYGRHKMRKTIPCHQEEFSCGLACGKELSCGRHKCQEQCHKGDCPTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -