Mang029889.1
Basic Information
- Insect
- Molanna angustata
- Gene Symbol
- -
- Assembly
- GCA_963576475.1
- Location
- OY754976.1:10422708-10434305[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.00059 0.076 15.2 2.2 1 23 1050 1072 1050 1072 0.98 2 12 3.7 4.8e+02 3.2 5.0 2 23 1167 1188 1166 1188 0.97 3 12 0.0015 0.2 13.9 0.6 1 23 1195 1217 1195 1217 0.98 4 12 0.0056 0.73 12.1 3.7 1 23 1223 1245 1223 1245 0.97 5 12 0.075 9.7 8.6 3.2 1 23 1251 1274 1251 1274 0.97 6 12 0.00012 0.016 17.3 0.7 1 23 1280 1302 1280 1302 0.98 7 12 0.087 11 8.4 4.3 1 23 1308 1330 1308 1330 0.98 8 12 0.00018 0.024 16.8 0.6 1 23 1336 1358 1336 1358 0.98 9 12 0.58 75 5.8 0.0 1 23 1364 1386 1364 1386 0.96 10 12 0.0044 0.56 12.4 3.2 1 23 1392 1414 1392 1414 0.98 11 12 0.0012 0.16 14.2 2.0 1 23 1420 1442 1420 1442 0.99 12 12 0.0002 0.026 16.6 0.4 1 23 1448 1470 1448 1470 0.98
Sequence Information
- Coding Sequence
- ATGGAGTATGTGGATATCCCACAGATCCCATCAGTGGCGAGTACGTCTCAAACCCTGACGGAGGACTATGAGGAATCCAATATTGGACAACACAGTGTAAAACGCTGTGGAGCATCCAGAAGAAGGCTTAAGAAGGCTCTGATAAGGGGTGGGATGTCTACAGACCCTGCTGACAAGCCCGCTACCGACACTCATCCTTCAGCTGTTAAAAGGCCAAGGCAGGATGACTCTATTGAGCATCCCAGTAAGAAGGACAAAGCTGAAGCAATGTCCTACCGAAAAGCCATCAGCCACAAAGTCGGAATCTGCTCTAAGACCGACTCAAAACTTACCGACAAGGAACTGACCACCCTTGAGGTAAGGCTAAACGAGGCCGTGTTTCAGGCAATGGATGCAAGGCAGTATGTTCCAAGATTCGAATCTTGTGTTCCCAAGATGGGCATACTAGCCATTATATGCATAGACCAAAGATCCAAGGAATGGATCGAGAAATTAGTTCCTATCTTACCCTGGAAGGGGGCGGAACTAAAGGTGATCCAAGGGCATGAACTGCCTAGGAACCACATAGCTGTGGCAACCATCCCAGGTAAAGCCTACCTAAAACCTCATATGGTATTAAGATTGCTAGAGAGCAATAAGGGAATCAACACCAAACACTGGAAGGTGTTAAACATCAATAAACTTGACTGGTGTTACAAAATGGCATTCTCAATTGATGAGGCATCAGCCAAAGCAATTGAGAGGGCTGGATACAGGCCTTATATGGGCATGACCAGGATATCCTTTATGATAAAGGAGCTGGGATCAAACAAGGAAAAGGGCCTTGCGACAAATGATGGATTAGCTGGGGCTGGACCTAGTTCAACTAATGCCGTCATTAAGGAAATTGGGCTGAATGCTGGAGACGTAGGCCCTGGCGAGGGGTCACGAAATCCTCATGTGGCAGCCTCTGAGATCGTGGTTGAGGCTGAGTCAACACCAGGCCTGGCCCGACCTGCTCTGGGTGGCTCTGGGGGTTTCGTGCCTGTCGCTGGGGCGTCAGTCGGAGTGAATCCTGCCAGTGGAAAGTCCATCGGTGTCACCAATGCTGGGACAACATCTGGCCCGACAGAGGTGATGCCGAGGACTGTGTCTGCCGGTGCTTCCAATGCTGGGACATCAACTGGCCCGTCAAAGGTGGCACCGAGGGCAGTGTCCATTGGTGGCGTCAATGCTGGGACATCGTCTGGCCCAGTAGGGACGGCATCGGGGACGGTTTCTGCCTTCGGTGGCGCCAATGCTGGGACAACATCTGGCCCGGCAGGGGAGGCACCGGGGACGACCGCTGGAGGGATTTTGGGGCCGGCACACTCGGCTCAAGTAGTAAGAGGTGCTAGAAGTGGCAAAAAGCTACCTAGAAAAACCTCATATCCCGCCGGAGGGTATACCTATGACGAAAACGGTAACCCAAAAGCGGCTCGAGCTGCTTCGGCTATTGCCAATAGAAGGTTGCAGAAAGAAAACCTAACAGCACTACTGGTACAGGAACCATGGACCATTAATAACAGAGTATGTGGTCTGGGCTCCATGGGAACAGTTATATCCTGTGACCATGAATCTAGACCCAGAGCATGTATagtgataaacaataataccaaATATATTGGCATTCCAGAATTTTGCAAAAGGGATCTCGTGGCTATAATGATCCCACAAAAAGCAGACAACAGAAAACTAATACTCTGTTCAGCATACTTTGCAGGTGATGAAGCATTACCGCTTACAATCCTTGAAGAAGTAATAAACTTCTCAAAGCAGAATGATGCGAGACTCATTTTTGGGTGTGATGCAAACGCTCATCATACAATATGGGGCAGCACAGACTGTAATCAAAGAGGGGAAAATCTTTTAGATTTCATCATCACACATAATCTAAACATTGTGAACAAAGGTAATGAACCTACATTCACTACCAAAGCAAGGTCTGAGGTTTTAGATCTCACCCTCTGCTCACAAAATATCAGTAATGAAGTAATGGACTGGCACGTATCGTCAGAAGAATCAGCTTCTGACCATAGACATTTAATGTTCCACATTAAAAGcctgacaaaaacaacaattcaatatagaaataaaaaatctactgaTTGGATTGGGTTCAAAGACGACCTTAAGGGTGGTATTAGCCCAATAAAGTCGACAAGAAATCTAAGAAGAATAGATTTAATTACGGATGAACTTACGGAAAACCTAATTATGGCCTATGAACAGAATTGcccaattaaaacaaaaactgaaaaaagggAAGTTCCCTGGTGGAACTCAAACCTATCCACCCTTAGGGCAAAAACTAGGAAACTGTTCAATAGGGCTAAACACTATAGCCTGTGGGAAGAGTATAGAAAATCTCTAACAGAATACCATAAGGCTATAAGGAAAGCCAAAACGGAATCTTGGAAAAAGTTCTGCAGCACCATAAATGGTACTAAAGAAACAGCAAGGATTAATAAAATCCTTGCCAGGAGGAAGGAACCTGGTATAGGTCTCCTAATAAAAGAAGATGGTAATTATACTGCAACATGCAAGGAAACACTTGAGCTATTAGCTAAAACACATTTTCCTGGATGCGAAACGGTGAAGGAAACCATCACTAAGCCTCCAGGATGCGATAAACCAAGTTTAAATGACTGGAGATTAGCATCAAAAATCTTCAGgcctaatcaaatcaaatgggctATCAACTCTTTTGAGCCTTATAAAAGCAGTGGAAATGATAACATATTCCCTGCTCTTCTACAGAACGGTATAGAAAAAATCATGCCGACACTGCTAAAAATATTCAGATCCAGTCTTGCATGGGGCTATGTTCCACAAAGCTGGAGAACAGTCAAAAACTCAAATCCGATCAAGTTTGAACAAGTTATTCTTATTAATGACGGTGATTCTGAAGGTTTTAGTGGTTATTATGATCCTTTGGATGGCGAAGAAAAAACTACAGATGCAAAATTGACAGGTTCAGGATGTATGGAAGTCGTGAACCTCACTAAGCCAGTATCAGATGATCCAGATATTtcaatagtaataaaaaaagagaatgAATCGGATGAAGATGTCGATACAAAGTATGATAGCGATGACAAGGCTTTGATCCAtatgaagaaaaatacataCGAATGTTCTGTATGTGAAAAGGTCTATAAAAACTACAAATCTTTTTCTAAACACGAGAAAATGCATTCCAAATCGAAGAAGAAACGTAAGAAAGAAAAAAAgtcaaaacataaaaaagaaataaagttAAAACTTAAAAAAGAAATACCACTTTCTGTGAATAGTGCATTGGTGGATTGTTTGTCCCCGAAGAACGACATTTACACTTGTAGCTGCGGTAAGGGGTTTCATTTACGCAGCAGTGTAGTCAATTGCTTGAAAAGCCATTCCGCATCCGGTGATGATCTCAATTTAGATATCGAAGGCCTATTGAAATTGTGCGGAAAAGAGTCTAAAAAGGGATTAAAGGtttgtaaaaaatgtaattttaccTGTAAGAAAACACAAGAGATGGTGGAGCATAAAATGACAcataaaaagaagaataaaatatatagatgtgATCAATGTGATTATGTAGGAACAAGACTGAATACACTAAATCGTCATAAATTAATTCATACAGATCAGAAACCATTTGTGTGCTCCAAGTGTCCTTATCGATGCAAATTGAAAAGTAAATTAAAGAGACATGAACTAGTTCACACAGGTTTGCCGGCATTTACCTGCGATCAATGTGACTTTTCGTGCAGGTTGAGAGGCACAATGAAGAAACATGCGAGAAATGAACATGGAGTTGTACGAATGTATTACTGTGATCAGTGTAATTACTCTGGTACCCGCAGTTCCACCCTTGCACGTCATCAACTTGTCCACCAAAAGGACAAACCATACGCGTGTGACCAATGTGATTATAAGTGTAAACTGAGTAATAAGTTGAAAACACACAAACTCACTCACATGAAAGCGGATTCTTTTACATGCGACGATTGTGGTCACATCACTAGCAGTTTAGGAGCATTGAAGGTTCACAGACGAAGTCACATGAAGAAGGGAATATTTCCGTGTGACGTGTGTCCTTATTCCACTCTTCTGCCTGAATATTTAGAAGCTCACAGAAACATTCACAGAGGAAAGAGAGCGTATCCCTGTATGGAATGTAGTTATGTCAGTACTCATTCGAGTTCCTTTCGACGCCACCTCTTTACTCACTCGGGAGAGAAGCCATTCACTTGTCCGACATGCCCTTTCCGAGCTTGTCAAGAAAACACTCTCAAGATACATATGCGCACACATTCGGGAGAACGACCTTATAAGTGTGATCAATGTGACTATGCTAGTTCTACCGCTGGGACACTCAAAAGACATAAACTTGTGCATTCCCCTATTGTTTGGTGA
- Protein Sequence
- MEYVDIPQIPSVASTSQTLTEDYEESNIGQHSVKRCGASRRRLKKALIRGGMSTDPADKPATDTHPSAVKRPRQDDSIEHPSKKDKAEAMSYRKAISHKVGICSKTDSKLTDKELTTLEVRLNEAVFQAMDARQYVPRFESCVPKMGILAIICIDQRSKEWIEKLVPILPWKGAELKVIQGHELPRNHIAVATIPGKAYLKPHMVLRLLESNKGINTKHWKVLNINKLDWCYKMAFSIDEASAKAIERAGYRPYMGMTRISFMIKELGSNKEKGLATNDGLAGAGPSSTNAVIKEIGLNAGDVGPGEGSRNPHVAASEIVVEAESTPGLARPALGGSGGFVPVAGASVGVNPASGKSIGVTNAGTTSGPTEVMPRTVSAGASNAGTSTGPSKVAPRAVSIGGVNAGTSSGPVGTASGTVSAFGGANAGTTSGPAGEAPGTTAGGILGPAHSAQVVRGARSGKKLPRKTSYPAGGYTYDENGNPKAARAASAIANRRLQKENLTALLVQEPWTINNRVCGLGSMGTVISCDHESRPRACIVINNNTKYIGIPEFCKRDLVAIMIPQKADNRKLILCSAYFAGDEALPLTILEEVINFSKQNDARLIFGCDANAHHTIWGSTDCNQRGENLLDFIITHNLNIVNKGNEPTFTTKARSEVLDLTLCSQNISNEVMDWHVSSEESASDHRHLMFHIKSLTKTTIQYRNKKSTDWIGFKDDLKGGISPIKSTRNLRRIDLITDELTENLIMAYEQNCPIKTKTEKREVPWWNSNLSTLRAKTRKLFNRAKHYSLWEEYRKSLTEYHKAIRKAKTESWKKFCSTINGTKETARINKILARRKEPGIGLLIKEDGNYTATCKETLELLAKTHFPGCETVKETITKPPGCDKPSLNDWRLASKIFRPNQIKWAINSFEPYKSSGNDNIFPALLQNGIEKIMPTLLKIFRSSLAWGYVPQSWRTVKNSNPIKFEQVILINDGDSEGFSGYYDPLDGEEKTTDAKLTGSGCMEVVNLTKPVSDDPDISIVIKKENESDEDVDTKYDSDDKALIHMKKNTYECSVCEKVYKNYKSFSKHEKMHSKSKKKRKKEKKSKHKKEIKLKLKKEIPLSVNSALVDCLSPKNDIYTCSCGKGFHLRSSVVNCLKSHSASGDDLNLDIEGLLKLCGKESKKGLKVCKKCNFTCKKTQEMVEHKMTHKKKNKIYRCDQCDYVGTRLNTLNRHKLIHTDQKPFVCSKCPYRCKLKSKLKRHELVHTGLPAFTCDQCDFSCRLRGTMKKHARNEHGVVRMYYCDQCNYSGTRSSTLARHQLVHQKDKPYACDQCDYKCKLSNKLKTHKLTHMKADSFTCDDCGHITSSLGALKVHRRSHMKKGIFPCDVCPYSTLLPEYLEAHRNIHRGKRAYPCMECSYVSTHSSSFRRHLFTHSGEKPFTCPTCPFRACQENTLKIHMRTHSGERPYKCDQCDYASSTAGTLKRHKLVHSPIVW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -