Mang045638.1
Basic Information
- Insect
- Molanna angustata
- Gene Symbol
- -
- Assembly
- GCA_963576475.1
- Location
- OY754984.1:4472239-4507285[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.00066 0.085 15.0 0.9 3 23 535 555 534 555 0.98 2 13 0.0013 0.17 14.1 1.8 1 23 560 583 560 583 0.98 3 13 2.3 3e+02 3.9 2.5 1 23 589 612 589 612 0.85 4 13 0.0017 0.22 13.8 1.6 1 23 619 642 619 642 0.97 5 13 0.00013 0.016 17.3 1.8 1 23 648 670 648 670 0.96 6 13 0.0079 1 11.6 0.3 2 23 825 846 825 846 0.97 7 13 0.0092 1.2 11.4 0.3 3 23 852 872 851 872 0.98 8 13 0.006 0.78 12.0 2.5 1 23 877 900 877 900 0.97 9 13 1.3 1.7e+02 4.6 0.5 1 23 906 929 906 929 0.81 10 13 9.9e-06 0.0013 20.8 0.7 1 23 936 959 936 959 0.98 11 13 0.00017 0.023 16.8 1.3 1 23 965 987 965 987 0.96 12 13 1e-05 0.0014 20.7 0.8 1 23 993 1015 993 1015 0.97 13 13 0.00018 0.023 16.8 1.0 2 23 1023 1045 1022 1045 0.94
Sequence Information
- Coding Sequence
- ATGTcttatgaaaactttgacttcTTTCTCAAAACAAAAGCTAAGACCAAGAGGATTCTAAAAGACAAGAAGAAAAAGGGATGGATTGAATACTGTTCCTCTCTCTCTCCGGATACAAACATTTCATCTGTATGGAAGAAGATCCAAAAACATCACAACAACACTTATACTCTCTTCCGAGAAATCATTAACTCTGAATGGGAAAATCATGTCTCCATATTCACAGATGGTTCAAAGAGGGAAGGAGAGCCCACCCTGGTAGGAGCTGCGCTTTTCTGTCCCTCTTTAAATAAGTCTTCTAAGTTCAAACTCCCATCAGAAACATTTATCTTCAATGCAGAATGTCTAGCTATTTTAGAGGCGGTTAACTTCATATTATCGTCAAACAATATTCCAAATTCTATCATTCTTACCGACTCTCTCGGTGCAGTcaaggcaatatcttccaaccccAAAAACCTTATTAATCACCTCACTGTTCTCCAGATTAAACATAAGATTCTTGATTTGGGAGTTCTGGGACAAAGTGTCTCTATAGCGTGCATCCCCAGCCACAGCGGAATCCCAGGAAATGACAGGGCTGATGAACTGGCCAAAGAAGCTTCTGAAAGTGGTGAcccaaaatatttctatatctTTCTCGAAGACATGATTCCTGTCCTCAAACAGAGAATGATGGCCCGCTGGGAACTtctatggaaaaaaaaacagtatccAATCTGGCTCCTTTTATGCATCCATCCAGCAAAAACTCCCAACAAAACCTTGGTTCTCAGACATTCTAATGAAAAAAAGCCACTGTCTATTATCTGTCGGATCAGACTTGGCTACTCCTGCACCCCTGTATTTTTGAAAAAGATCCGTATAGAAGACTCTTCACTCTGTGAATGTGGTCTGGAAGACGGTGACGTCAATCACATCTTCCTTGGCTGTACACTATTCCACAAGGCTTCCATATATTCTAAAGCCATCAGTCTCAAAATCTCTCTCCCCATAAATATTCCATTTCTTGTCTATAGCCACCCCTCCAATCTACAGATGCCTAGCACTATTTATCAATGCAAACAATATCCAAATATAGTAAACACGTATACTCCAGCTTCTCTCTGTCTCTCTtACAAACCGAATGTATCTTCATTCGACAATAATTCATCCATATTCTACGAAGACAATGATAAGGCTGCTGATAATGTTGACGAATCCTTAAATTTTACTAAAGTCAATAGTGACGAATATGCTTTtgctgaaaataatatttctaaatataCTATCAAGAATCAAATCTCAAGCGCAGAATCAGCCAATTCGCCGAAAACAAAATTCTGGTATACATCAAATGAcgcaacaaaaaataatgaaatcttCACATCCAAAACAGTTATCCGACTTAAAAATGAAGAATATCAAAGTGACGACGAAATGTCCGTGACTTCGTTGGAAATGGACATCGCTACCGGACGAAACAGAGAAATACAAAACAACCCTTCCCGTTTTCTCCCTGTCTTGAATCCCCAAAGTAAAGAATGCCCACTTTGTTCCAATCTGTTTCTTTCATTCACGGCGTTGCTGATTCACTTCGAAAAGCACTTTCCCGAAGTCCTGTGTGACTTGTGCGGGCAGGGTTTCAAAAAGATGAAATCCCTCAATGACCACATGAACAAACACTTGAAGATACAGTTTAAATGTGAGCAGTGTGATAAGTTGTATTATGCAAGAGAGGCACTGAAGCATCACATTCGCATCAGACACGAAGGGATACACGAGTATCCGTGTAATTTGTGCAAAGAACGGTTTCGTGGCATcgtcatgaaaaaaaaacacctctTTGAATGCCACGGTGTTGAGAGTGAGATGTATCCGTGCTCCAGGTGCGATAAAAGGTTTTATAGTCCGTACGAAATGGACTACCATTTGAAAAAGACACATTTGAAACTGAGGCCTCATTTTTGTCCTGAATgcaatatgaatttttattcccAAAGGGACTTGAAAGATCACATGTCAATACACACAGCTTGTGATGAAACGAAGGATGTGTCTACTTTTTACAATGATATTGATCAGTcttacaaaaacaatatatcATCTGTCAACGTAATTGAAACAGTCAAATGCGATTTTGTTGAAAAGGATATTGTTTATCCTGTCGATCTAGATTCACCTGCAAGTTCAATATTTGAGTCCTCCAAATTAAGGCGTTCCATCAGAAGAGATAAGAAGAAATATACGAttgatagttttaataaaaatcacaaAAGCAATCAAAGAAAAAAGACTAAAGATGTAGAGAAAAAGGATAAAATATTTACTCCCGATTCACTCGttcaatgtaaatatataaaaaaacattgtagtGATGATGAGGCGTCAGTAACTTCATTGGAACTGGATATAGCTACCGGACGTCACAAAACATTCACCATTACGAAAAACCAGCCTCGTTCGATACCCGTCTTAGATTCCCAAAGCAGGGAGTGCCCGGTCTGTTTGAAAACGTTTTTTACGTTCGGAGCACTGTTGACGCACTATGAAAAGCACTATCCCGAGGGTCTTTGTTACGTCTGCGGAGAGGGATTCAAAGAGATGAGATCATTGGACAACCACATGAACAAACATTTAGACATACGATTCAATTGCAAACAGTGCGATAAATGGTATCATACGAAAAGCGCATTGAAGATCCACGTCAGAATCAGGCATCAGGGAGTCATCGAATTCACATGTTATTTGTGTGATGAACGGTTTCGAGGTGTTGTCGTTAAGAAGAAGCATCTTCTCAATGTCCACGGAGTAGAGAGTGAGATGTATCCGTGTCCTGAGTGTGGAAAAAAGTTTTTCAGTCCATTTGAAATGAAGGATCATTTGAGAAGGAAACATTTGAAGCTAAAATCTCACCCGTGTTCAGAATGTGACAAGAGTTTCTACACACTGAGAGATGTCAAGGATCACATGTATATTCATACAGgTGTCAAACGACATTCATGTGAAATCTGCGGGAAGGCTCTTAAAACCAGAAAATCATTAACTGCGCATATAATGTCCCACAAGAATACTGTGAAAAACTTAAACTGTGAATTCTGCGAGAAAAAGTTTGCGCTGAAGAGTAACCTCAGAAGACACGTTATTCGTAGTCATTTAAAAGGAAATCGATAA
- Protein Sequence
- MSYENFDFFLKTKAKTKRILKDKKKKGWIEYCSSLSPDTNISSVWKKIQKHHNNTYTLFREIINSEWENHVSIFTDGSKREGEPTLVGAALFCPSLNKSSKFKLPSETFIFNAECLAILEAVNFILSSNNIPNSIILTDSLGAVKAISSNPKNLINHLTVLQIKHKILDLGVLGQSVSIACIPSHSGIPGNDRADELAKEASESGDPKYFYIFLEDMIPVLKQRMMARWELLWKKKQYPIWLLLCIHPAKTPNKTLVLRHSNEKKPLSIICRIRLGYSCTPVFLKKIRIEDSSLCECGLEDGDVNHIFLGCTLFHKASIYSKAISLKISLPINIPFLVYSHPSNLQMPSTIYQCKQYPNIVNTYTPASLCLSYKPNVSSFDNNSSIFYEDNDKAADNVDESLNFTKVNSDEYAFAENNISKYTIKNQISSAESANSPKTKFWYTSNDATKNNEIFTSKTVIRLKNEEYQSDDEMSVTSLEMDIATGRNREIQNNPSRFLPVLNPQSKECPLCSNLFLSFTALLIHFEKHFPEVLCDLCGQGFKKMKSLNDHMNKHLKIQFKCEQCDKLYYAREALKHHIRIRHEGIHEYPCNLCKERFRGIVMKKKHLFECHGVESEMYPCSRCDKRFYSPYEMDYHLKKTHLKLRPHFCPECNMNFYSQRDLKDHMSIHTACDETKDVSTFYNDIDQSYKNNISSVNVIETVKCDFVEKDIVYPVDLDSPASSIFESSKLRRSIRRDKKKYTIDSFNKNHKSNQRKKTKDVEKKDKIFTPDSLVQCKYIKKHCSDDEASVTSLELDIATGRHKTFTITKNQPRSIPVLDSQSRECPVCLKTFFTFGALLTHYEKHYPEGLCYVCGEGFKEMRSLDNHMNKHLDIRFNCKQCDKWYHTKSALKIHVRIRHQGVIEFTCYLCDERFRGVVVKKKHLLNVHGVESEMYPCPECGKKFFSPFEMKDHLRRKHLKLKSHPCSECDKSFYTLRDVKDHMYIHTGVKRHSCEICGKALKTRKSLTAHIMSHKNTVKNLNCEFCEKKFALKSNLRRHVIRSHLKGNR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -