Basic Information

Gene Symbol
-
Assembly
GCA_963576475.1
Location
OY754965.1:41020907-41039576[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 0.022 2.8 10.2 0.6 1 23 402 425 402 425 0.94
2 17 3.1 4e+02 3.5 7.2 1 21 620 640 620 641 0.94
3 17 0.53 69 5.9 8.0 1 23 703 726 703 726 0.96
4 17 0.067 8.6 8.7 3.8 1 21 765 787 765 789 0.95
5 17 0.11 15 8.0 3.0 1 23 795 817 795 817 0.97
6 17 0.012 1.5 11.1 4.0 1 23 823 845 823 845 0.99
7 17 0.048 6.2 9.2 0.3 1 23 1010 1032 1010 1032 0.96
8 17 0.33 43 6.5 5.8 1 23 1039 1061 1039 1061 0.95
9 17 0.005 0.65 12.2 1.5 1 23 1092 1115 1092 1115 0.94
10 17 0.63 81 5.6 0.1 1 23 1122 1145 1122 1145 0.97
11 17 2.2e-05 0.0029 19.7 0.2 1 23 1167 1190 1167 1190 0.98
12 17 0.00028 0.036 16.2 1.9 1 23 1202 1225 1202 1225 0.98
13 17 0.046 5.9 9.2 3.7 1 23 1234 1257 1234 1257 0.95
14 17 0.00068 0.088 15.0 6.2 1 23 1263 1285 1263 1285 0.98
15 17 8.6e-05 0.011 17.8 0.5 1 23 1291 1313 1291 1313 0.98
16 17 7.7e-06 0.001 21.1 0.1 1 23 1319 1341 1319 1341 0.98
17 17 2.5e-05 0.0033 19.5 0.4 3 23 1350 1371 1348 1371 0.95

Sequence Information

Coding Sequence
ATGGCATTAATTCTGTATTTGGAGAATGCAGAAGGAGTGGAGACCCCGGTACATGTTCTGCCTGAGGAtgattttcaaacatttttactgCGGGCAAAGTCTGTCATTGGACAAGATATAGATATCTCATGTGTTGTAGGAGATAAGAATGTATCTTTAGATGACAATATTTATCAGTTCATGTTACAGACTGCATTTTgcgaaaaagaaaataatgttcCGGTTGAAAATGACATTACAGATATGCCACAAGAGTCTTTGATAGTTGACAATCAGAATTCTCAAATAGATAGTTACGATGAAAACTTCCATGCAGGATATAAACATCTTATTTATATGCTTGAAGATGGAACACAAGTAGCCTATAAAGTTTACGAAGACGCAAACATCAGTGAAATCGAAGATTTACAACAAATTGATGAAAAGGTTAATTCTTCATCTTCATcagattcaaataaaacaaatcaagtCAATGATATCTGTGATTCTAGGAACACCGAAGAAAATAAagcaattgaaaataatatacatgtTTCAAAAGAAAAAACTGTTCATAAAGTATCTAAACCGTGTAGTGATTTAGAAAAATCAAACAAGTATAAGTTGTCGCTGTCAGATAAAATGGAAGAGTATCGAAGaaatgaaaacacaaaaaaatgcaCTAGTAAAAGTACAAAATGCAGTTTTTGTTCATCGAATATTAACCCTAGTATAttcatttcttatatatttgACGATAAAGATCAAAAGgaacaaaaaagaaataaaaataaaaaatatagaaatgaaTCCAAAATAATATGCGACGTCTgcttgaataataattttattaaaatagaaaaGGTCCACAAGAagttagaaaaaaatgaatatttagtTGTTAGAAATAATATTCAAACAATTTACAAGAAAATGGTGGATGTTGttgataatattatagaagttGATTCTTCTTTTCCAAGACTTTTAAATAAGATCAATAGCGAAAGAGACAAACAAAAACACATTATGTCCGGTGACAATGCTATGAACCTATTAGGTACCAAACAGGATAATCTTGAATTGTCCAATGAAAAGGTGAATAAAGATGAGACAGatcttaatattaaattatattgttgtagattatGTGGTTTGGTATTTGATCAGTTACCTATTTTACACTCACTCGATCATATCCCTTCAACTGTGGATGGCACTGTGTTTCCTTGTGTACTTTGTCAGTATGGTTTCACCTCATACCAAGAATTAAGTGATCATATGCACGCCGACCATCTAAgcattaaaatagaaaatactttGGGTGTTATTGACTAttcaaacagtaaaaaatgttcaaaagaaattaaaacaaaagTAACAACAAAATCTCTATACACTCTACAAAAGCAACCACCAAATAAAGATCACACAAAAGATATTGAAGAATATACAATAGTTAGTAAAAACAGTACTGATTCACAGAATACATCATCTAAAGTCTTTGAAATGTCTGTTAATAATGACTTAGCAATGTTGTTTTGCACTAAAGATAGCGGAAAACCAGAATCCACTCAGTTGCCAAAAAAGGGTTTAAAACTTTTAGAAAAActtttaaagaaacaaaaagaCATTTATTTCTCTGAAGAATGGTTGGATCACAATACTGGAGTTATTGTGAAATCACAAGTAAATGAAAATGTTATTGATTATATTAACGATGAACTTTCCGTTTCACATAAGGATTCAGAATCAGATTCAGACAGTGGAGTGTGGATAGTTCAAGCTGGAGATGTGGAGTCAGAAAATAAAGCCACATCAACCGTGAAAAAGGATGTGAATGGATGTATCGAAAATAATGTAATTACCGGTCGTTCACACCAGTGCACATTTTGCAAaaaacgtTATTGTTCTATGGAAAGGTTAGCGAGACATTTGTGCTATACAAAACCTtctaaaaacaaattgaaaattgCAACCATCAACCCTTCTATTCAAAACAATGCCACTGAAAAGCCAGAAATACAGGATactgaaaataataattgttccAACAATGAAGAAATGAAATGTGAAGGTTTGGACGACGGAGGAAAAGAATCCAATGATGCAAAAACTAAAGGACAGCATAGTTGTAATGTTTGTCACAAAAGCTTCCATACAAAAATAAGACttcaatttcatatGCGCTATATTCACTGTGATTCATCAACAGATCCTATTTTACGTTGTTCAGCCTGTCCTGATTTGACTTTTGATAGTGAAGTAAAGTTATATGATCACATACACTTTTCACATCCGAAAGTCAATAAGTTTACATGTCCCATTAGTGGATGTACCAAAGAGTTTCATCTCAAGTCATCGCTTACCACTCACTTGAGATGTCACACGGGTGAAAGGAGTCATCGTTGTGAAGAATGTGGTAAACTGTTTTTGGACCGACAAACATTGACGGAACACCATGTGACACATCTCAAGGTAAAACCATTTCAGTGTCACATATGCctaaaatatctcaatagaaaatCTCGGTTGCGTATGCACTTGCTTACACATCAGTCACAACCAATCAGTGCTCGTCTCTTAGCATGCAAGCGATGTTACTCGGCTTTCAGTGATGCCGCATCAGCAGAAGACCATGTTAATGAACTGGGTGAATGCATTGAAAAGTTTTATACTAAACCACAAAATGGTAATGAAGAATCCAGGGCTACCgatgaaaaacaaaatttgagtGATTCTGGGGTTGAATTGAGTGACATacacaatcaaaataaaacgGATATAATTAAAgcagatgaaaaaaataattataaaagttatttatttgaagaacCAGAGACAAATGATTTTGAACTTGATTGCGAAATGAagtcTAAATCTTTTGAGTTGACCGACCTTATGAAACCTACTAATAGGCAATGTAGGTTAAGTCAAGTGATGAGTTTGACAACCGGAGAAGAAAATGAAAAGACAAAAGAAGAAATGTTACAGAAGCTGTCACCAAATGCTTCAAATGTGATAACGGTCGTTGAAATAGACAAAGTGTACCGTTGTGAATATTGTGAAAGaGTGTATTGGAGTCAAAACGCTCTAAATCTACACAGAGGATCTCATCAAGGACAGAAAAATCCATTTGTTTGCCACGTTTGCGGAGCTACATTTTCTACATATTCTCGGTGTACAACGCACAAGACGACACACGGTTTTTTCAGGAGTAGAACAACTAAACTCCCTCCTGGAGAGACTCTTGTAGCACCTCCTAATCGCGATGTCTTTCCTGTCgtcaaatattttctttgtgagGTTTGCGGTAAATCATATTTACACTGGACTTACCTTCAAGTACACAGAAGACTAAAGCATTCAGACAATGTGCATATGTATAAATGTGTCACTTGTGGAGATGAATTTCCAAACAGTTGGGGTGTGGCTTATCACAGAAAAAAGGTTCATGGACAAATCAGTGGATCGGCACCACCTGATGAAGTTCCCGTTCTTACTCCTGAAAGATTACATTACTCTTGTCCAGATTGCGGAATATCTGTGAAAACTAAAGCCCAATTGTTTCTACATAGAAGATCTGCTCATCCTCCATCTACAACACCTTCTAAACCTgGGTTGTATAGTTGCACACAATGTAATAAAAGATACGTCACTAAGGTTACTCTTCGAGGTCACATAAAaaAACAGCATGAGAAGTCTAGTCAAGACAAAAACCACAACTGTACACAATGTGGAAAAACTTTTCTTCATGCTAATGGCCTCAATACACATAACAGACGTGTACACATGAAGGAGGTGAACTATGCATGCACTCATTGTAGTAAAACATTCTACAGTGCGTGTGACTTACAGAGCCATACAAGACGTCATACTGGTGAAAGACCATTTCCTTGTGATGTTTGTGGAAAGTTCTTCAGGACAAGAGGAATGCGCAATGAACATCTCAGAATTCACAGTGGTGAGAGACCATATCCATGTGACATCTGTGGCCTGGCATTCCGAAGATCATACGCTCTGCGTAGTCACCGACTCATTCACAATGCTGCCAGCAGGAGATTGGCCTGCCCTATTTGTCCGAGAGTTTTCCGTCTGAAAGCTGAGCTCAACACTCACATGAGGCATTCACATGGAGTCGaaccacaCACATGGACATTGGAGAATTCATCCAACGATAAATCACATATCAACACTgatcaaaataacaaaaatgataatgCTAATGTTCATAACAGAAATGGTGGAATAATTATATTCCATGGAAAGGGCAACCAGAGTGCCAAAGAGCCTAATATTTTACAAGAGCCAGCAGTAAGTCATGAAACAAATGTAAAGAATGATAAAAACCACGGTATAAATGAACAAGATTTGATGGCTCAAAATGATGTTGAAATATTCACTGCAATATTTGATGAATCGCGAAACAATTTTGGAGATGAAATTGCTATTGAAATGACCGATACCGTATTTCTGCATGATCATAACGGTCATTTGATTATTCCGGAAGGCTCCATTTCAAACGGTCATATTCTATTACAcagtcaaaatattatttcaaatggtGAAATTCTGTTACATTCTCCAAATCCAACAACCACCGTATCAGGAGATCAATTACAAAATCAATGTTCAATATTCAACAGGCAGTTTGTCACAATTCAGGATAGTAACTTGGTTACGAACAATCAAATTATCTTACACGATCAGAATATGGCAAGCAATGATCGATTCATCTTAAGCGAAGATGACGAAGTAATCGGAGAAGTTTCGGAGGAATCTGGAAATGTTATAATCAACAGTCAAAATGGAAATGAGATGATTTTGGGGATAAACGATTTAAAACATTTCAGAGTATTAGAGGATCGTTCTCTTTTCACTATCGAAGCAGACGATATTGTTCTGAATGATTCTAAGCTAGTCAACATTAATGATGATAACATAAATGATTTGAAAGTAGTCGACGTTGGTGGTGAGACTGAACATAAGATGGGGAATAATTTAAAGCTTGTTAATTTGAATAAcattaatgaaatgaaaataattgatgGTGCATGCGATGAAATTAATGTCAGCGATGGAAACATCCATAGTGATTTGCATGTTGATGATGACGGCATCGAAACCAGTAACGTCTTTGTAATAGATTGGCAGGAAAGTGAAAGCAGAAATGAGtctcaataa
Protein Sequence
MALILYLENAEGVETPVHVLPEDDFQTFLLRAKSVIGQDIDISCVVGDKNVSLDDNIYQFMLQTAFCEKENNVPVENDITDMPQESLIVDNQNSQIDSYDENFHAGYKHLIYMLEDGTQVAYKVYEDANISEIEDLQQIDEKVNSSSSSDSNKTNQVNDICDSRNTEENKAIENNIHVSKEKTVHKVSKPCSDLEKSNKYKLSLSDKMEEYRRNENTKKCTSKSTKCSFCSSNINPSIFISYIFDDKDQKEQKRNKNKKYRNESKIICDVCLNNNFIKIEKVHKKLEKNEYLVVRNNIQTIYKKMVDVVDNIIEVDSSFPRLLNKINSERDKQKHIMSGDNAMNLLGTKQDNLELSNEKVNKDETDLNIKLYCCRLCGLVFDQLPILHSLDHIPSTVDGTVFPCVLCQYGFTSYQELSDHMHADHLSIKIENTLGVIDYSNSKKCSKEIKTKVTTKSLYTLQKQPPNKDHTKDIEEYTIVSKNSTDSQNTSSKVFEMSVNNDLAMLFCTKDSGKPESTQLPKKGLKLLEKLLKKQKDIYFSEEWLDHNTGVIVKSQVNENVIDYINDELSVSHKDSESDSDSGVWIVQAGDVESENKATSTVKKDVNGCIENNVITGRSHQCTFCKKRYCSMERLARHLCYTKPSKNKLKIATINPSIQNNATEKPEIQDTENNNCSNNEEMKCEGLDDGGKESNDAKTKGQHSCNVCHKSFHTKIRLQFHMRYIHCDSSTDPILRCSACPDLTFDSEVKLYDHIHFSHPKVNKFTCPISGCTKEFHLKSSLTTHLRCHTGERSHRCEECGKLFLDRQTLTEHHVTHLKVKPFQCHICLKYLNRKSRLRMHLLTHQSQPISARLLACKRCYSAFSDAASAEDHVNELGECIEKFYTKPQNGNEESRATDEKQNLSDSGVELSDIHNQNKTDIIKADEKNNYKSYLFEEPETNDFELDCEMKSKSFELTDLMKPTNRQCRLSQVMSLTTGEENEKTKEEMLQKLSPNASNVITVVEIDKVYRCEYCERVYWSQNALNLHRGSHQGQKNPFVCHVCGATFSTYSRCTTHKTTHGFFRSRTTKLPPGETLVAPPNRDVFPVVKYFLCEVCGKSYLHWTYLQVHRRLKHSDNVHMYKCVTCGDEFPNSWGVAYHRKKVHGQISGSAPPDEVPVLTPERLHYSCPDCGISVKTKAQLFLHRRSAHPPSTTPSKPGLYSCTQCNKRYVTKVTLRGHIKKQHEKSSQDKNHNCTQCGKTFLHANGLNTHNRRVHMKEVNYACTHCSKTFYSACDLQSHTRRHTGERPFPCDVCGKFFRTRGMRNEHLRIHSGERPYPCDICGLAFRRSYALRSHRLIHNAASRRLACPICPRVFRLKAELNTHMRHSHGVEPHTWTLENSSNDKSHINTDQNNKNDNANVHNRNGGIIIFHGKGNQSAKEPNILQEPAVSHETNVKNDKNHGINEQDLMAQNDVEIFTAIFDESRNNFGDEIAIEMTDTVFLHDHNGHLIIPEGSISNGHILLHSQNIISNGEILLHSPNPTTTVSGDQLQNQCSIFNRQFVTIQDSNLVTNNQIILHDQNMASNDRFILSEDDEVIGEVSEESGNVIINSQNGNEMILGINDLKHFRVLEDRSLFTIEADDIVLNDSKLVNINDDNINDLKVVDVGGETEHKMGNNLKLVNLNNINEMKIIDGACDEINVSDGNIHSDLHVDDDGIETSNVFVIDWQESESRNESQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-