Mang044423.1
Basic Information
- Insect
- Molanna angustata
- Gene Symbol
- Zfy1
- Assembly
- GCA_963576475.1
- Location
- OY754983.1:19998981-20000744[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.0024 0.32 13.2 2.2 1 23 245 267 245 267 0.99 2 11 0.0067 0.87 11.9 0.6 2 23 275 297 275 297 0.93 3 11 1.2 1.5e+02 4.8 0.5 2 23 302 323 301 323 0.92 4 11 9.2e-05 0.012 17.7 1.7 1 23 328 351 328 351 0.96 5 11 6.5e-05 0.0084 18.2 0.6 2 23 356 378 355 378 0.95 6 11 0.00042 0.054 15.6 1.0 2 23 385 406 384 406 0.94 7 11 0.00061 0.079 15.1 1.7 1 21 412 432 412 437 0.92 8 11 2.3e-05 0.0029 19.6 0.3 1 23 445 468 445 468 0.96 9 11 0.00027 0.034 16.3 1.0 1 23 474 497 474 497 0.97 10 11 9.6e-06 0.0012 20.8 3.9 1 23 506 528 506 528 0.97 11 11 6.2e-05 0.008 18.3 0.9 1 23 534 557 534 557 0.96
Sequence Information
- Coding Sequence
- ATGTGTCGAGCATGCTTGGTCGGCGATGAATCATTAACGTCCTTGAAGATGAGTGGATTTGAAGATATCTTTGTGTTGTTGCTCGGGTTTAAATTGACTGAAAGTCCAACCACGCACTGGCTTTGTGACAAATGCATCCATACCATGCAGAAAATATCTGCCTTCCGGGACCTCTGTATTAAGACAGACGGTGTGCTTAGGGAATATTATATAAGTTATTCTGAAGGTGATAAAGAAGGAATAGTATTCTTGCAGTCTCAAAGAGAAATGTTACACACTTGTGATACAGGACAAGACTATTCGAAAACTTGGAATGTTGAATTAAAGCCACAAATCAAAGAAGAGTTTATGGATGCACCTTTGCTGACTAATAGCAACAGTCCCATGGCAACAAATTGTTTCTCAGATGATAATTTAGAAACTAGCacacacgaagaagaagaagaagaagatataaagatttttacatcgaatataaatacatatgcTAATAATCCTTCGACACAAGTCTCGAATTCTGTTAAGCTGGTGAAATCTGTTGACATTGATATGATAAATGAAATGTTCAATTCAGAAGATTTTGAGCTTTGGAAAGCGGCCAATCTCAAACATTTGGTTGGAAAAGGTAATCCAGATAAAAACATGATGATAACGGAAATACTTAATACAGATGAAGAAATTGCGGAAGATCGTCTTATCAGAGAAAGGAACCCAAAATACGTTCAGAGTTCTTTTAAATGCCAGTCCTGCGTTTTTGGATTCAAATATGCTTTCACATTAGAGAATCATATGAAAAGACACGAACTGGAATACGGTCCAGAGAAATGCAATTTATGTGACCAGCGTTTGTCAAATGTTGCATCGTTACGTAAACATATATTTTGGACTCACAGATTGCGTATTCGCTGTGCCATCTGTGGTCATAGAGTAAGGGACAATACAAGAGCTATGTATCACGCACGACTACACAAAGGAGAAAAGTATTCTTGTCAGATTTGTCAAGCGAAGTTTAGAACTCCTTACAGTTTGAAAACACACACTACTAAGTTACACGAGAAAAACATCACATGTGCTGTATGCAATGAATTTTTCACTTCAAAGAAATCATTACAGAAACATCTTGAGGTCACCCATACCCTTTCAAAAGAACTGAAATGCAATGTTTGTGAAAAAGTGTTAAAAACCCAATATCAATTGTTGAAACATTTTGAAAACCATCGCAGTACTAAAAACCATTACTGTGTAGAGTGCGATAAATACTTTTCAAGCTACAGTACTTTACAGATTCATTTAACGAAAACCCAAGTACATGTTGATATTGCAACGTTGAAATTTTCTTGTGACAAATGTGCAAAAAAATACTCCGATGCGAGTGATTTAAAACAACACATTGAAAGTGCTCACGAAGGGAAAAGAAGTTTTAATTGTTTAGAGTGCAACTCCTCATACACCTCGGCTAGTGCACTGTGTAAGCATGTACGGGTAATCCACCGAGGATACAAAGCACCAAAAAAACATTGTTGTCATGTATGTGACAAGGCTTTCACAGTGAAGGCTGCCTTGGAAAAGCATTTGCGAGTACATACTGGGGAAAAACCATTTTCCTGTTCACAGTGTGAATGGAGATTTAAACAGAAAGCTACGCTCAATACACATGTAAAACTTGTACATCTCAAAATGAAGCGGAATGTCAAAAATAAGTCTGACAAGAAAGTTGCAGCCAATAATGATTTACCTTCCACGTCTATAAAATCTCTTACATAG
- Protein Sequence
- MCRACLVGDESLTSLKMSGFEDIFVLLLGFKLTESPTTHWLCDKCIHTMQKISAFRDLCIKTDGVLREYYISYSEGDKEGIVFLQSQREMLHTCDTGQDYSKTWNVELKPQIKEEFMDAPLLTNSNSPMATNCFSDDNLETSTHEEEEEEDIKIFTSNINTYANNPSTQVSNSVKLVKSVDIDMINEMFNSEDFELWKAANLKHLVGKGNPDKNMMITEILNTDEEIAEDRLIRERNPKYVQSSFKCQSCVFGFKYAFTLENHMKRHELEYGPEKCNLCDQRLSNVASLRKHIFWTHRLRIRCAICGHRVRDNTRAMYHARLHKGEKYSCQICQAKFRTPYSLKTHTTKLHEKNITCAVCNEFFTSKKSLQKHLEVTHTLSKELKCNVCEKVLKTQYQLLKHFENHRSTKNHYCVECDKYFSSYSTLQIHLTKTQVHVDIATLKFSCDKCAKKYSDASDLKQHIESAHEGKRSFNCLECNSSYTSASALCKHVRVIHRGYKAPKKHCCHVCDKAFTVKAALEKHLRVHTGEKPFSCSQCEWRFKQKATLNTHVKLVHLKMKRNVKNKSDKKVAANNDLPSTSIKSLT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -