Mang027987.2
Basic Information
- Insect
- Molanna angustata
- Gene Symbol
- -
- Assembly
- GCA_963576475.1
- Location
- OY754975.1:14098073-14115434[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 4.3 5.6e+02 3.0 0.7 2 23 172 194 171 194 0.93 2 16 3.4 4.4e+02 3.4 1.0 3 23 436 459 434 459 0.86 3 16 0.016 2.1 10.6 0.1 1 23 497 519 497 519 0.95 4 16 0.0019 0.24 13.6 0.2 1 23 567 590 567 590 0.96 5 16 0.00055 0.071 15.3 0.9 1 23 608 631 608 631 0.94 6 16 0.82 1.1e+02 5.3 0.1 2 23 676 698 675 698 0.92 7 16 2 2.6e+02 4.1 0.1 1 23 706 729 706 729 0.89 8 16 0.00021 0.027 16.6 1.0 1 23 735 758 735 758 0.93 9 16 0.00016 0.021 17.0 1.9 1 23 765 787 765 787 0.98 10 16 1.1e-05 0.0015 20.6 2.7 1 23 792 814 792 814 0.96 11 16 0.00033 0.043 16.0 4.0 1 23 820 842 820 842 0.98 12 16 0.0017 0.22 13.7 3.3 1 23 848 870 848 870 0.98 13 16 5e-06 0.00065 21.7 1.9 2 23 877 898 877 898 0.98 14 16 0.0003 0.039 16.1 2.9 2 23 905 927 905 927 0.95 15 16 5.6e-05 0.0072 18.4 1.9 1 23 934 956 934 956 0.97 16 16 0.0018 0.24 13.6 0.7 2 23 963 985 962 985 0.96
Sequence Information
- Coding Sequence
- ATGACAGAACAAAATCCGCCTATAGAATCTGAGGATTCAGATAATGAACCGCTTTCATTACTAACGGAAGACAAAAATCGTGATATTTTATCAGAAGTTGATAATTCTAGTTTGCTGTTAAAAACTCAACctctatttaataaaatatatgaaaagaaaaagtTATGGAAAAAAACAGAGGTCATCCATGACAAAATTGATACAGAACATGCAAGATCATACGCTGACACTGACTGTATTACAAATGGTGGAACTTTTACACATATGTTTATTTCGTACATACTGCCCCCTATAAGGTTGGATGAGCCTTTATTAGATGTATGGCTGGATGCAAAATCTATTAACCAAACTGGACCAATATCTTGCATTCTATGCTTCGAATGTTTCTTGaacaaaaataagttaattatgCACTACGTTCTTAATCATAACAAACCTTTTTGTGGAACTTGCAGATATTTACTGCCTGATAAGCAATCATGGAACAAGCATTGGGAGTGTCATCTTCCGTTGCGGTGTTCTCAGTGTCCTGATAACTTCATGGATGAATTGAGTTTAAGGAATCACTTCAACAATTTTCATCAGTTGGCACACTGTAGAATGTGCAGTCTCGTATTGCCAATCGGAGAACTATTTAAAAAGCATCTTTATACAAAGCATTCTGTTaccataaatcaaaatatagaCAAGGACGAATTATGGTCGTTGGCTTATCCCAATTCTTGGAACTTTTCTTGTTTACTGTGCACCAAAGAAAACCTTCAGAGTAGCGACTTTTTGAGACACTTTCTTTATCATCacaaattttctttaaaaacatTATCATGTTTAGTGAATGGTAAAAACTTAGGGTTCACAGTTCTCGGAGCTAATATCAGCACATTTACCCAATCAGCAGAGAATGAAGATGGTATTCCTCCGGATACCAACTTTTACCATCCAAATGAAGGATCGAATGGTAAAGAATCCCAAGAAAGTATATTGCCAGAAGTGAAAAAAGAAGTTATCAGCGACGAAGAAACAGAAGATTTAGCGGAAGACTACAAGGAAATTGATAACATCGAAAAGCAAGATCAGGAAGACGAAGTAGATCAAGCATCAGAATACAACGCTGCACCTCACACTTTTCTAGAGAAATGGTCCGGCAGAGAAGACTTTGATGTTACTTTGGCGCAATTCATTATTTTCTCCGATCAAGAAATGGACTATGCAACGAATAATATTGTCGAAATGAATTCTTCCACCGTTACTGCCAACAATTTTCTCAGCTGCGAAGTATATAACCTTGATTCAACCTCTGTATCGTGTTCATTGTGTTCTTCGAATGTTACATTTTCCTCCTTGACTCATTTATCAGATCACATTGTGAAACAGCACGCGTTAAAAGGCACACCTAACTATGTTTGCCGTACGTGTTTACTAAATTGCCAAACACATCAAGAATTGGTAAAGCATAATGATTCAGAGAGAGtgttatttgataatttatatttatgtcaaATGTGCGACGAAGAGTTTCCATCTAGAGAGGATGCGCGTATCCATTTGAGCAGTCATTGGGAGACTTTAAAGTCTGTGGAGTGTACCAGTCCTCAGTTGGGACTCAAGTGTCGCTATTGTGCCCTGTTGTTTTGGCACGAGCTGGATCGTGAAGAACATCAGTGTCAAGTTCATTACACCACTTATAAACATCACTTTTTCAAATGCAAAACTTGTGATACCATTTTCAGCGATAAGATATGGTGGGCAGCGCATGAAATGAAAGAACATCCAGAAGATGACACAGTGTCAAAAACAGAAATATCCAAGACATGGATGGCATATAAATGTGTCGTATGTAGTAAGGTTTATCGTCAATTGGATTCATTACGAACTCATTTTATGGAACAACACCCAGATGCTAAAAGACTTTATTGCACTGTTAGCGGTTGCATTTCACATCCGTTCAGAATACCGAGATATCTCAAACGACATCACGAGGTGATTCACCGATCGGGAACTGTTGATCCAGGATTAGTGAATCTTCGATGTTTAGATTGTGGCAAACAGATGAGTACTGCGCGGGCTGCTACCACACATAGGACTGTAGCTCATGGAGATAAATCAGCGTCTCGATTCAAATGTCGAATTTGCGGACTTGGTTTGCCTTCCATGCAAGACAGGAAACTACATTACCTTGTAGTACATCCCAATGTTCCAGCATTCAGCTGCACAGTATGTGGAAAAGGATATAATAATAAGTCTGCATTATATTCTCATCGAACACAAAGCCATGCTGTCAATATTGTCACATACACATGTTCCTActgtagtaaaatatttaacAAAAGAGATTCATACAAAGAACATCTGTTGATTCACGTTGGACCACGTCATGCCTGTCCTCATTGCTCTCGAGTATTTGTACAGCGGTCCAATATGCTGCGACATATCCGACTTCATACTGGGGAGAAACCGTATCCCTGTCTTCATTGCGAGAAGACATTCTCAGATAAGGGGGCTTGTAATTCGCACATgaggaCTCACTCAAAACAAGATGCTTATCCATGTTCTTTTTGTGGTCAAAAGTTCTTGCAGAAACAAAAACTGAAATATCATATGAGGAAACATACTGGAGAAGatttaGAGACATGCGGTATTTGCTCTAAGAAGTTTACCAACCTCACAAATCTTCGAGAGCATATGAAGACACACGATGATTCTAGTCCAGCCACCTGCCTTCATTGTGGAAAGTCATTTATGTCAAAACGTTATATGGAACGGCACATTAGAGACAGCCATAGTAACACGGCTGAAGTTCATCCCTGTCCATTGTGTGGACGAGCTTGTCCAAGGTTAAGTGCTCTCAGGCATCATCTTCTCACACATTCTAGTGTTAAACATATTACGTGTCTCGTTTGTGGCAAGAGTTATAACGGTAAAAAGAGCATTAATCGACATCTAATGAAAAGGCACAGAATCCAAGTGACAGACGAACGCTACAAGACCAGCTACCACCAGTTGGATCCGAGACAGTGCGGTTTGGGACTGgacgaagaaacatttttaaGGGTATTCGGTCCCCAGAAAGACATAAAACCTATCTTACCATTTCAATTTACAAATGTCAATAACTCGACGCCTAAGAACAAAACGAAACCTCCACGACCACAGGTCCAGAACGACGGGTTAGATGAGGAAGAATCGGACCAAGAGTATAGACCAATGAGGAAGATCAAAGTAGAGTCTGAAGACCAAAATACGAATGAAGGAGATGTACCAATTTCGGGGCTGGAGTTGGCGTCTTTGAAATCTCGAGTGAGAAGGGAAACGGCGAAGGCGGTCAACTATGCCTTTGATTCGGACGACGATGGCGACAAACCATTTGGGAAAATGACAAAAAAGAAGAGCAAAGCTAAgttcaaaaagaaattaaaaaccaaagatactcgtaacaattttaataacggTGTGAGTCAAGAACAATATGAAATTGAAGTACCGTTGTTTCCAATGGTGGAAATTAAAACTGAACCAGTGGATTATGATTAG
- Protein Sequence
- MTEQNPPIESEDSDNEPLSLLTEDKNRDILSEVDNSSLLLKTQPLFNKIYEKKKLWKKTEVIHDKIDTEHARSYADTDCITNGGTFTHMFISYILPPIRLDEPLLDVWLDAKSINQTGPISCILCFECFLNKNKLIMHYVLNHNKPFCGTCRYLLPDKQSWNKHWECHLPLRCSQCPDNFMDELSLRNHFNNFHQLAHCRMCSLVLPIGELFKKHLYTKHSVTINQNIDKDELWSLAYPNSWNFSCLLCTKENLQSSDFLRHFLYHHKFSLKTLSCLVNGKNLGFTVLGANISTFTQSAENEDGIPPDTNFYHPNEGSNGKESQESILPEVKKEVISDEETEDLAEDYKEIDNIEKQDQEDEVDQASEYNAAPHTFLEKWSGREDFDVTLAQFIIFSDQEMDYATNNIVEMNSSTVTANNFLSCEVYNLDSTSVSCSLCSSNVTFSSLTHLSDHIVKQHALKGTPNYVCRTCLLNCQTHQELVKHNDSERVLFDNLYLCQMCDEEFPSREDARIHLSSHWETLKSVECTSPQLGLKCRYCALLFWHELDREEHQCQVHYTTYKHHFFKCKTCDTIFSDKIWWAAHEMKEHPEDDTVSKTEISKTWMAYKCVVCSKVYRQLDSLRTHFMEQHPDAKRLYCTVSGCISHPFRIPRYLKRHHEVIHRSGTVDPGLVNLRCLDCGKQMSTARAATTHRTVAHGDKSASRFKCRICGLGLPSMQDRKLHYLVVHPNVPAFSCTVCGKGYNNKSALYSHRTQSHAVNIVTYTCSYCSKIFNKRDSYKEHLLIHVGPRHACPHCSRVFVQRSNMLRHIRLHTGEKPYPCLHCEKTFSDKGACNSHMRTHSKQDAYPCSFCGQKFLQKQKLKYHMRKHTGEDLETCGICSKKFTNLTNLREHMKTHDDSSPATCLHCGKSFMSKRYMERHIRDSHSNTAEVHPCPLCGRACPRLSALRHHLLTHSSVKHITCLVCGKSYNGKKSINRHLMKRHRIQVTDERYKTSYHQLDPRQCGLGLDEETFLRVFGPQKDIKPILPFQFTNVNNSTPKNKTKPPRPQVQNDGLDEEESDQEYRPMRKIKVESEDQNTNEGDVPISGLELASLKSRVRRETAKAVNYAFDSDDDGDKPFGKMTKKKSKAKFKKKLKTKDTRNNFNNGVSQEQYEIEVPLFPMVEIKTEPVDYD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -