Mang041755.1
Basic Information
- Insect
- Molanna angustata
- Gene Symbol
- znf711
- Assembly
- GCA_963576475.1
- Location
- OY754982.1:14306015-14307427[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.00018 0.024 16.8 0.1 2 23 154 175 153 175 0.97 2 11 7.9e-05 0.01 17.9 0.3 1 23 181 204 181 204 0.97 3 11 0.00082 0.11 14.7 1.1 1 23 216 238 216 238 0.98 4 11 4.9e-06 0.00063 21.7 2.5 1 23 244 266 244 266 0.98 5 11 6.7e-06 0.00087 21.3 0.3 1 23 272 294 272 294 0.97 6 11 3.3e-06 0.00042 22.3 0.4 1 23 300 322 300 322 0.98 7 11 3e-05 0.0039 19.3 0.3 3 23 330 351 328 351 0.95 8 11 3.4 4.4e+02 3.3 6.1 2 23 357 375 356 375 0.77 9 11 2.4e-06 0.00031 22.7 1.9 1 23 381 403 381 403 0.98 10 11 0.55 72 5.8 3.5 1 23 409 434 409 434 0.90 11 11 9.1e-06 0.0012 20.9 1.2 1 23 440 462 440 463 0.96
Sequence Information
- Coding Sequence
- atgaccAAGGTACAAGAAATTTGTAGAGTATGTCTTAAAGAAGGAGaacttttaatttcaatattcgAGTATGAAGGCGATATAAAGTACCATCTAAAAATCGCACATTGCACCGGAATTGAAATTAGTGAATCTGATGGCTATCCGTCTCTAATATGTCAAAATTGTCGATCAGACTTGAATATCGCATACGATTTTGTATTAAGATGTCAAGACTCCGACAAAAATCTACGTGAAACAAAACATGACATTGTCAAATTAGAATTGAGTGATTTTCCCAATTCAGATGTTGAAGATTTTCACAATGATGAAGATGAcaatgacataaaaaaaattgtgactgATTTGAATGAAGCAAGCGACATTGGCGTTGAGACAATAGTGTttgttgaaaagaaaaaaaagaatcgtaaaaaagaaaagaagaaaaaacgtctcaaaaagaatttaaaagATTTACAATGTTCAATATGCGGTTTGATCACGAGCAGTCGAGCAGCCATGATTGTTCATATGAGACGTCATACAGGTGAACGACCGTACAAGTGTCCAGTGTGTGTGATGGATTTTTCTCAAACGGGAACTCTCAAGGTGCACATGGAACGACGTCACTCTTCTGAACCCAGAGCGATGCGCGATAGACCTTTTTCTTGCGAATCATGTGGTGTACGCTTCTTTAGCAAACGAGATCTATTAGTACACTCAAGACGACACACTGGAGATCACCCTTATGCATGCGAACATTGTTCACAACGTTTCACCCAATTGGGATCACTCATCCGACATCGGCGAACGCACACCGGTGAACGTCCATACATATGTGTAACCTGCGGCAAGTCTTTCACTGACAGCTCTGTTCTTAGAATGCACCAAACAGTTCACAGCGAAGAACGTCGCTTTACATGCACCATCTGTGGCAAAGCTGTTAAATCGAAAAATGCTCTGAACAAACATCTCAATCTACATCGAGAATACAAGTCTATTATTTGTGATCAATGCGGGGTCGGGTTCTCAACAAAAGGTAATCTCACTCTGCACACTAAGAAACAACATTCTGAGAAATCGGGACAGTGTAATGAGTGTGGTAAACATTGCTCTGATATTGCGGAGCACATGAGGAAACACACGGGAGATACGGCCTACGCATGCAATATTTGTGGTAAAAGTTTCACCCTGCAAAGGAGTTTGTCAGTTCACATGCACAAACACATCAACGCTGACAAGCACAAGTGTGATAAAGACGACTGTTTTAAAACTTTCCCTAAAAAGTATTTACTCGACTTTCATCTTTTGAAATATCATTCAAATGAAACACCCTTTCCGTGTAAAATTTGTGAAAAGGGATATTTAAGAGCCAGTGATTTAAAGAAGCATATGAGAGTGCACCATCCAAATTTTCTTTATGTACagtga
- Protein Sequence
- MTKVQEICRVCLKEGELLISIFEYEGDIKYHLKIAHCTGIEISESDGYPSLICQNCRSDLNIAYDFVLRCQDSDKNLRETKHDIVKLELSDFPNSDVEDFHNDEDDNDIKKIVTDLNEASDIGVETIVFVEKKKKNRKKEKKKKRLKKNLKDLQCSICGLITSSRAAMIVHMRRHTGERPYKCPVCVMDFSQTGTLKVHMERRHSSEPRAMRDRPFSCESCGVRFFSKRDLLVHSRRHTGDHPYACEHCSQRFTQLGSLIRHRRTHTGERPYICVTCGKSFTDSSVLRMHQTVHSEERRFTCTICGKAVKSKNALNKHLNLHREYKSIICDQCGVGFSTKGNLTLHTKKQHSEKSGQCNECGKHCSDIAEHMRKHTGDTAYACNICGKSFTLQRSLSVHMHKHINADKHKCDKDDCFKTFPKKYLLDFHLLKYHSNETPFPCKICEKGYLRASDLKKHMRVHHPNFLYVQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -