Mang017664.1
Basic Information
- Insect
- Molanna angustata
- Gene Symbol
- -
- Assembly
- GCA_963576475.1
- Location
- OY754970.1:26821074-26825776[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.77 99 5.4 2.8 3 23 48 69 47 69 0.91 2 23 0.62 80 5.7 0.2 1 21 488 508 488 509 0.96 3 23 6.9 8.9e+02 2.4 0.3 1 22 561 582 561 584 0.82 4 23 6.9 8.9e+02 2.4 3.5 3 21 594 613 593 614 0.90 5 23 0.013 1.7 10.9 0.5 3 23 623 644 621 644 0.94 6 23 0.00025 0.033 16.3 1.1 2 23 666 688 665 688 0.97 7 23 1.1 1.5e+02 4.8 6.1 1 23 694 717 694 717 0.95 8 23 0.72 93 5.5 0.1 1 23 752 775 752 775 0.93 9 23 0.012 1.6 11.1 0.3 1 23 780 802 780 802 0.96 10 23 0.02 2.6 10.4 0.2 1 23 808 831 808 831 0.97 11 23 0.0013 0.17 14.1 2.7 1 23 845 867 845 867 0.98 12 23 0.0035 0.45 12.7 1.6 1 23 909 932 909 932 0.97 13 23 9.7e-05 0.013 17.6 0.9 1 23 997 1020 997 1020 0.98 14 23 0.0018 0.23 13.7 1.9 2 23 1039 1061 1039 1061 0.97 15 23 0.15 19 7.6 0.1 3 23 1068 1089 1067 1089 0.94 16 23 0.91 1.2e+02 5.1 0.2 1 13 1135 1147 1135 1156 0.75 17 23 0.0003 0.039 16.1 0.3 1 23 1166 1188 1166 1188 0.93 18 23 4.8e-05 0.0062 18.6 0.2 2 23 1285 1307 1285 1307 0.93 19 23 4.2e-07 5.4e-05 25.1 1.5 3 23 1314 1334 1313 1334 0.98 20 23 0.086 11 8.4 4.7 1 19 1357 1375 1357 1380 0.91 21 23 0.043 5.6 9.3 0.7 1 20 1414 1433 1414 1434 0.93 22 23 5.1e-05 0.0066 18.5 2.8 1 23 1435 1458 1435 1459 0.96 23 23 8.9e-05 0.012 17.8 0.8 1 23 1467 1490 1467 1490 0.96
Sequence Information
- Coding Sequence
- ATGAGAGACGAAaatgaggatgatgatgatgaagataacAGTGGAGATGAAGAGGTGGAAAGAATTGTTCCAATCAAGAAGAATCTACCGATCACAACAGCTAAGCGTATTTTGCCAGCTGCTGAGATGGCTTCGAAGGATTGCCTTTTATGTGGGAGATCATATCATTATTCTCACAATGCCAGGCGTCACGAACTTTTGACTCATAATTATGACCGTTATACTAACAGGTACAAGTCACCTAGTCCTCCACCAATAGGTAAACTTCGACCAAATCCTTTAAATCCCAAAGCTCGTCTTTTGCCCAACCCTATTAATCCCAAAATCCAAATGATGCcaaaaaatagtcataaaataacATCAACTGCTGCATCTTCCAGTCGTAGAAACGATTATCCAGTGAGAATTAGGTCATTATCTGATCTTCAAAGAAACGATAAACAACCACAAATTTTAAAATCTCTTCTAACTCGCAAACCAGAAATTCTTGTATCTGAACCACAAATAATGCGGTCCCGCTCTGAAAGTCCAGAAACATTGGTATCAGAACCGGAACTTTCTGCTTTTCAAGTTGAAACTATTATATCTGAACCGgatacatatattaataattcTGGAGATTCAGAAGAGGATGAGGATGATCAGTATGATGAGTCTATGGCAGATGGTGAATTTGACGAAGAAGTTGAAATATCACCTAATTTAGATATAAATAAGATTATTGGGGTAGAAAGTCAAGAGCAGTGCATTCCTAGGAAACCTCAGGTAAAATCTGCAGAGCAAATAACTCCCGATGTTCATCATGAAACTGATGAAGATGTGCAGAATGGTATTTCTTCAGAGGATGAGGGTGAACCTTTAGAAAATAGTAAACCTTATACTGgagatgaaaatataaatgatatgaatgaaaataatGCTAATGATGAAAATGCAGAAAGGATAAATGAAATTCCAGCTTCTGACGACCAAGAAAACAATGAAGATTTTGGTaacgataataataaaagtGATGATGGTGGTCAAGACTatcaagaagaagaatattatgaTGATGATTTACCACCAGTTCCTCTGGCACCTATCGTTGAAATCAATGAGAACATTGAAAATGATCATGAGAATTCTGACAATGATATTCCTAATGAAGATGAACATGTTGAAAATGAACAGgttgaaaatgaaaatgttgataataatattgaaaaggaAAATGAAATTGGTATTGAGATGGATAATGACATTGATGTAGAGAATAATGCATTGAGTGAACATATTGACATCAAAGAGATTTCATTACCATCTGTAACAATGACACCTAttcaaaaatcatttataatcaAGTATAGAGATGTCATTGAACAAGTAAATACTTTGAAATGTAAGTGTTGTAATAGAACACATTCAAGAAGAAAGGCTGTGATTCAGCATTTACAAAAGAATAACCTAAAAGTTCCTAAACACACATGCTACCGCTGTGTCATAACTTTCGGACATATTGGAGCACTATTAAGTCACATGAGGGCAAATGTTTGCACAGATTTATGGAAAATTATTTATGAAGAGGGAGGTATTCCCGATAATATGGTATGCGAGTCAAACTCTAACACTGAGGTTAAAGAAGCTCCTGCAGAAACCTTCAATAAATCccaatataaagatatattgaaTTCCAGATCATACGCTTGTAAGCTTTGTCCTGCTAAATTCCAACTTAAACAGTTTATAATGAAACATGTTTTAGATGTGCATGAAAATGGAGGTCAACGTATACCATTATGTTGCATTCATTGTAAATATAGAttcaaagataataaaatttgGAAAAGACATATTCGTAATGGAGAGTGCACTGTCAATATAGCTTGTGAGATATGCAATGAAAAATTCAGATCTTTACAGCATTTTAGTGAACATGCTTTGTCTGTTCATGTAGGAGAAGCTGCGGAACAATCTTCCGAAAATGTTAATCGATCTGTAGATGAACGTCGTACCGAATGTCCTATTTGTCATAAAACTGCAAATACCTATCAGAACCTTGTCAAACACttgaaaacaattcacaatgAAGAAAAGCCTCACATGTGTCAACATTgtgatagtaaatttgaaagTGTTACTGAGTTCAACCatcatatatataaagaacattCAGATAGAGTTCCTAATGGGGATGCTGAGCAAATGATGGAACAGTTTTCTGAAGATCAAGTAGATTTAAGCATTGTTAAACAAGAAGTTACCACTTACAATTATTCATGTACTGATTGTGCATCTATGTTTGACACTGTGGACGGATGGACTCAACATCAAATTGACGCTCACAATCATCAAGCTTATGAATGTGATCAATGTGACAAGAAGTTCTTACAAGATTCTGAACTTATCGATCACAAAAATGCTCATTTGAGAGTCAAGTTTTATTCTTGCACAGTGTGTGCCAATTCTTATAGCTCGCCTCAAAGGCTATCCGAACACATGATGAAGGCCCATCCGGAAGAATCTTCAATGTCAAATGATGCAGAAAATCCATTTCATTGTGGGTTGTGTGTACGTAGTTTCAAAAATCGTCAAGCTTACTCCAATCATATGCGTATTCATGCTAAAGTACAAATTCCAAATAAGAAGGCTGGATCTGGAGAAAAACCAATGAAGAAATTTGTCCCTCAACCCGtttcttataatataacatataggAACTCTCCAAAGTCCACAGATGCTCCTTATTCTTGCGATATTTGTGGCAAAGGGTTCCTCCATAAGAAGAATATTTGGAAGCATAAAAAGGTATTACATCCGGAAGAAGCTAGGAGAATAGAATTGGAGAAGGCAGGTGCCCATTTCATGAATGCTTCCACAGAGGAAGACGATTTTAGTCAGAATCAAAATAGTACAGGATTATCTATACCCCAGTTTGACAGTTTCACATCTGCAGCTTATGAAGAGTCTGAgagtaatataaatatgaatgatGGCACTCCTCATGAATATCAGTGTGATTTATGTGACAAGAAGTTCGCAGTCAAGAGTAGCATATGGAAACATAAACGTGTGAAACATGGTATTGTTAATTACAGTTTGCAGGAAGAGAATGCCAAGTCTGAAAATCGAGCCAGTTGTACTATTTGTAAACTTAACTTTACGGATAAGAAAGCTTACTATAGACATAGAAAAACTGTGCACAGGGTTAATGTTCAAGCTTGTAAAATTTGTGGAAAAGCTTTAAATTCAACTTTGGAATTATACGAACATTACAAAGCATCTCATGCTAAGGAACTATTGGGTTATAATGCCAGTCAGGGAAATTCTAACAAATCTCAAGTAGAATCGCAATCTTCTAGAGACTTGCGAAGTGAAGAGTATGATGAGGACTCTGATAGAGCTGATCAATATCAAGCTAGATATCCGTGTGACTCTTGCGGTAAAACTTTCCTCGGAATGATGGCATTACAAAATCACGCATGTATTAGACAAAATACATCCAGTGGAGAGAAATTTGATTGTGAAATTTGCAataaaagttatacttcaaTATCGGCACTCAAAAGTCACCGAGGTTGGCATCTCAGATCACCCGATGGAAAAGCTGCTTTCAGTAGTTCCGGTCTTTGGATGCCGCATAATAAATTAACTACAAAAGTTAGCAAATTTGAAGTTCGAGAACCTCCTACGGTTAAACATTCTACTCCCATTATAGAACCGGGACATTTACAGATCAAGCGCAAACTTCCTCCAGATGTTCAGATGACATTGTTGAAAAAGAAAAAGCTTTCGGACGAAGTGACAGTTGAATTAGTCCAGACTGTACCTCGTGGGGAGTCTTCTAAGAAGACACCATATGAGGAGGTAAGAACATGTAATCTTTGCGGGAAAGAATTCACCACAAAGGCAGCATTTGTACGACACATGGACGAAGTGCATCGTCCCAACTCTGTTTTCTGTCCTATTTGTAACAAGAGCTTCACGCGTAAGTCTACTCTCTTGGTACATATGCAGAAGCACGGCATTATGACTGACAATGCGAGGGTGGATGCGGAAGAACATCAAGCGAGGGAACCAGAAAGATACTACAGCTGTGACCTTTGTAATGTACGTTACACAACAGCCAAGTCTCTGAGACGTCATTGTGTCAAGCACCATAATATTGCTGCGGAGGATGTGATTGAAGAAGGTGGATCTGTGGGTGCAGGTGCCGGAGTAGTGGGTACTCGCGTGGTGGATGTAGGAGGAGGTTCGCGGCATCGCTGCGGTCAGTGCGGTGAAGTCTTCTCATCCGATAGAGACATGTGGCAACATCGCCATTATTCTTGCAATCAGTGTGGAATGTTCTTCTCCCGCCAGCAGTATCTGTCTGCTCATATGAAAGCGCGCCACCACGAACACGCCGATAATGTTTTCTTTCCTTGCAACATGTGTGACAGATTCTACATGAACAAGAAGAGCTTACAGAGACATATAGAATCTGCTCATTAG
- Protein Sequence
- MRDENEDDDDEDNSGDEEVERIVPIKKNLPITTAKRILPAAEMASKDCLLCGRSYHYSHNARRHELLTHNYDRYTNRYKSPSPPPIGKLRPNPLNPKARLLPNPINPKIQMMPKNSHKITSTAASSSRRNDYPVRIRSLSDLQRNDKQPQILKSLLTRKPEILVSEPQIMRSRSESPETLVSEPELSAFQVETIISEPDTYINNSGDSEEDEDDQYDESMADGEFDEEVEISPNLDINKIIGVESQEQCIPRKPQVKSAEQITPDVHHETDEDVQNGISSEDEGEPLENSKPYTGDENINDMNENNANDENAERINEIPASDDQENNEDFGNDNNKSDDGGQDYQEEEYYDDDLPPVPLAPIVEINENIENDHENSDNDIPNEDEHVENEQVENENVDNNIEKENEIGIEMDNDIDVENNALSEHIDIKEISLPSVTMTPIQKSFIIKYRDVIEQVNTLKCKCCNRTHSRRKAVIQHLQKNNLKVPKHTCYRCVITFGHIGALLSHMRANVCTDLWKIIYEEGGIPDNMVCESNSNTEVKEAPAETFNKSQYKDILNSRSYACKLCPAKFQLKQFIMKHVLDVHENGGQRIPLCCIHCKYRFKDNKIWKRHIRNGECTVNIACEICNEKFRSLQHFSEHALSVHVGEAAEQSSENVNRSVDERRTECPICHKTANTYQNLVKHLKTIHNEEKPHMCQHCDSKFESVTEFNHHIYKEHSDRVPNGDAEQMMEQFSEDQVDLSIVKQEVTTYNYSCTDCASMFDTVDGWTQHQIDAHNHQAYECDQCDKKFLQDSELIDHKNAHLRVKFYSCTVCANSYSSPQRLSEHMMKAHPEESSMSNDAENPFHCGLCVRSFKNRQAYSNHMRIHAKVQIPNKKAGSGEKPMKKFVPQPVSYNITYRNSPKSTDAPYSCDICGKGFLHKKNIWKHKKVLHPEEARRIELEKAGAHFMNASTEEDDFSQNQNSTGLSIPQFDSFTSAAYEESESNINMNDGTPHEYQCDLCDKKFAVKSSIWKHKRVKHGIVNYSLQEENAKSENRASCTICKLNFTDKKAYYRHRKTVHRVNVQACKICGKALNSTLELYEHYKASHAKELLGYNASQGNSNKSQVESQSSRDLRSEEYDEDSDRADQYQARYPCDSCGKTFLGMMALQNHACIRQNTSSGEKFDCEICNKSYTSISALKSHRGWHLRSPDGKAAFSSSGLWMPHNKLTTKVSKFEVREPPTVKHSTPIIEPGHLQIKRKLPPDVQMTLLKKKKLSDEVTVELVQTVPRGESSKKTPYEEVRTCNLCGKEFTTKAAFVRHMDEVHRPNSVFCPICNKSFTRKSTLLVHMQKHGIMTDNARVDAEEHQAREPERYYSCDLCNVRYTTAKSLRRHCVKHHNIAAEDVIEEGGSVGAGAGVVGTRVVDVGGGSRHRCGQCGEVFSSDRDMWQHRHYSCNQCGMFFSRQQYLSAHMKARHHEHADNVFFPCNMCDRFYMNKKSLQRHIESAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -