Mang043404.1
Basic Information
- Insect
- Molanna angustata
- Gene Symbol
- -
- Assembly
- GCA_963576475.1
- Location
- OY754983.1:6565889-6573186[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1e-06 0.00013 23.9 1.7 1 23 168 190 168 190 0.96 2 15 0.00089 0.12 14.6 6.1 1 20 196 215 196 218 0.93 3 15 8.2e-06 0.0011 21.0 2.9 1 23 224 246 224 246 0.96 4 15 2.2e-05 0.0029 19.6 1.0 1 23 252 274 252 274 0.97 5 15 3.7 4.8e+02 3.2 0.4 3 21 281 299 279 300 0.92 6 15 3.1e-05 0.004 19.2 3.8 1 23 315 337 315 337 0.96 7 15 7e-05 0.0091 18.1 0.8 1 19 343 361 343 362 0.97 8 15 6.5e-06 0.00084 21.3 0.4 1 23 386 408 386 408 0.95 9 15 0.015 1.9 10.8 0.7 1 23 414 436 414 436 0.98 10 15 4.1e-06 0.00053 22.0 1.1 1 23 442 464 442 464 0.98 11 15 9.2e-06 0.0012 20.9 0.4 1 23 470 492 470 492 0.98 12 15 7.7e-06 0.001 21.1 0.1 1 23 498 520 498 520 0.98 13 15 8e-07 0.0001 24.2 0.6 1 23 526 548 526 548 0.98 14 15 1.3 1.6e+02 4.7 2.2 1 23 553 575 553 575 0.97 15 15 4.5e-05 0.0058 18.7 3.5 1 23 581 603 581 603 0.97
Sequence Information
- Coding Sequence
- ATGAAGGCAATGGACCGCAGCAATGTGGCCGCATTGGAGCTGTTGGACAAAGACATTGGtccaaattacaatattaaccTGGAATTGAATCCAGCAAGCTTCGGTCTCAGCGATGCTGTCTTCCAAATCGTCACTCTCGAAGAGTCTGGAAAGACGGAGACCCTTGTTCAACCGAAGAAGAAAGATTCGGAAATCATGTCACCAGAATTAGCTAGCGTCATGTGTGACTTTATTTGTACATTCAGTTGCAAAGCTTGCAAGCAGACGTTTGGCAACCCTCGATGCATACCCAACCACTACAAATTCTGCAAAGGAAAACGAATAGAGAGGGTTGAGATCATTGCTGGTGTTGTCCGAAACAAACCATCAAAGGATCATTCCGTCCCGACAAAAAATAATCAGATAGAAATGACAACACCAACTGTGATTTCAGTTGATAATAACAAAAACGAACTTGCAAATAATGATACTAACATAATTGGAAAAGTCAAAGACATTTCTTATGACTGCTCAAAGTGTGGCAAATCTTTCTCACAGCCAAGCTTTTTAAAGAGACACAGCCTATCACACACCAACGAAAAACCATTTCGTTGTGAGAGATGCAACAAGTGCTTCAGGACACTGTACCACCTAAAAAGTCATGCATGGACGCATCTGGAGAGGAAGTCGCACGCGTGCACAGTGTGTGGACGTTCGTTTCCCCACATATCGTATTTGAGGAGCCACATGAAATCGCACATTAGTAACGAACCATTCAACTGTGACAATTGTGGAAAGTCGTACGAAACTTCCAATGAACtaaaattacacaaattaaCGCATGATGCATCAGAACAGATCTGCTCAATATGTTCAGCCATCTTCCCATGCAGTTCCTCACTCAGTGAACATCGCAATTTCTCTTCGTGTGGTTCTAAATTGATTAACCCTGATGGTGAAGTGCACGCATGTCATGTGTGCCAGCGAGTCTTTCACAGAGCTAGCGCTTTGCAACGTCACATTCTGTCACACACGCAGGACCGACCGTTCATCTGCAAGAGaTGCGGTAAGAGTTTTAAGCTATCGTCACAACTCAAGGCCCACAATTGGATACACGAGGAACAAAAACCATTTGTTTGTGAAGTACACATGTTGAAACACAGCGGGCAACGACCACACGTTTGTTCACAGTGTGGCAAGGCGTTTAAGACTCTGGGCAACTTGAACGTTCACGCCACAATACACACGGGACTGCGACCTTACACCTGCCCTTGTTGCGGACTGACAGCGAGATCTGTGTCCATGCTGAGGGAGCATGTACGCTCACACACAAACCATAAACCGTTTGTTTGCGGCGTGTGCGGAAAGGCATTTCACAGAAGTACGACCCTCAAAGTCCACACTCGGATACACACGGGAGAAAAGCCATTTCCCTGCAagATGTGTGACAAGCGTTTTATGCGCGTGGGAGACTTGATAGTCCACACGAGGACACACACGGGCGAGCGTCCCTACTCCTGCGAGACATGCGGCAAAGCCTTCGCCAGCAGAGGGACTCTAGTAACACACTGGAAAGTACACACCAGTATCAAGCAATATGTTTGTGATCAATGCGGGAAGTCTTTCACAGGTCTCAGCTATCTGAAGGTCCACAAACGAATCCACTCGGGTGAGAGATTTTCCTGTGAGCTGTGCCCTTACAAGACTATTTGTCGCAGTCGGCTCAGGATTCATCGCATGGTCCACACGGGTGAGAGACCGCATGTCTGCGACGAGTGCGGATATAAAACAACGACACTCAAAAATCTCAAGAGGCATaaacagacacacaaaatggaCAATGACTGCAAAGAATTTGTCAgctaa
- Protein Sequence
- MKAMDRSNVAALELLDKDIGPNYNINLELNPASFGLSDAVFQIVTLEESGKTETLVQPKKKDSEIMSPELASVMCDFICTFSCKACKQTFGNPRCIPNHYKFCKGKRIERVEIIAGVVRNKPSKDHSVPTKNNQIEMTTPTVISVDNNKNELANNDTNIIGKVKDISYDCSKCGKSFSQPSFLKRHSLSHTNEKPFRCERCNKCFRTLYHLKSHAWTHLERKSHACTVCGRSFPHISYLRSHMKSHISNEPFNCDNCGKSYETSNELKLHKLTHDASEQICSICSAIFPCSSSLSEHRNFSSCGSKLINPDGEVHACHVCQRVFHRASALQRHILSHTQDRPFICKRCGKSFKLSSQLKAHNWIHEEQKPFVCEVHMLKHSGQRPHVCSQCGKAFKTLGNLNVHATIHTGLRPYTCPCCGLTARSVSMLREHVRSHTNHKPFVCGVCGKAFHRSTTLKVHTRIHTGEKPFPCKMCDKRFMRVGDLIVHTRTHTGERPYSCETCGKAFASRGTLVTHWKVHTSIKQYVCDQCGKSFTGLSYLKVHKRIHSGERFSCELCPYKTICRSRLRIHRMVHTGERPHVCDECGYKTTTLKNLKRHKQTHKMDNDCKEFVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -