Mang003480.1
Basic Information
- Insect
- Molanna angustata
- Gene Symbol
- ZNF236
- Assembly
- GCA_963576475.1
- Location
- OY754965.1:43638-45452[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.00021 0.028 16.6 2.7 1 23 71 93 71 93 0.97 2 14 0.0028 0.36 13.1 0.1 2 23 100 122 99 122 0.91 3 14 0.25 32 6.9 3.4 2 20 128 146 127 148 0.92 4 14 2.9e-05 0.0038 19.3 1.2 1 23 234 256 234 256 0.96 5 14 6.7e-08 8.7e-06 27.6 1.5 2 23 263 284 262 284 0.97 6 14 0.00046 0.06 15.5 2.1 1 20 289 308 289 311 0.94 7 14 6.2e-05 0.008 18.3 0.3 1 23 317 340 317 340 0.98 8 14 2.1e-05 0.0028 19.7 1.0 2 23 350 371 349 371 0.97 9 14 0.096 12 8.2 0.5 1 23 376 398 376 398 0.97 10 14 7.1e-06 0.00092 21.2 0.4 1 23 405 427 405 427 0.96 11 14 7e-07 9e-05 24.4 0.8 1 23 433 455 433 455 0.98 12 14 9.3e-07 0.00012 24.0 2.0 1 23 461 483 461 483 0.97 13 14 2.8e-06 0.00037 22.5 1.6 1 23 489 511 489 511 0.98 14 14 0.0024 0.31 13.3 1.3 1 23 516 539 516 539 0.96
Sequence Information
- Coding Sequence
- ATGTTTGCTTCAAGTACCGGGCTTTACATTTCGGAGGATGACATTTTTCCTCACAGGATCTGCTCGCAATGTGCGGAGAGGCTGCGTTCGGCTTATCTCTTTCGGGCGATGTGTCGAGAATCAGACGAAAAGATGCGGAGAGTCTCGGGTATTGGAGGATCTCGTCGCGACTTCAGCACCCAAACTCCGTCTGAGGACTGCCCACAAGGACATCACTGTCCCGAGTGTCAAAAGAAGTTCAGCAGCGCTTGGGGTTTGAGTGTTCACAGCCGACGGCACTTGACAGAAAGGGCAGTGACATGTGTGCACTGTGGCCGTCTATATCGAGACGCTGAGAGTCTGACTGCGCACACTGAGGGGGCGCATGGAGCGGTAGACCTGTGCTGTGGTCGCTGTCAACGCCATTTCTCTCGACTTAAACGATACAAGAAACATATAGCAGAGGGCGGATGTGATATAACTGCTAAGGAGGAACCAGTTTCAGATAATGGAGTGTGGGGTCCTGATGTGCCCATCAAAGAGGAACCTCCCGAGGAGCCCAACAGGAATCAGAGGGACTTGTCGGATGACGATCGTGATGATTTTACAGCGGTAAAGGAAGAATCTACCGAAGCCGATTATGAGGCTGAAGTTGCAACAGTGAAAGCCATCTCCAGTCGAGGTAGGCGCAGGATTTCCAGACTGATACCTTTGGAAGAGCATCCATGTTCCAAGTGCCCTCGGGTGTTTTCGAGCGCAGAACATTTAACTGTGCATGAAGCAAAACACGTTGTAAAACCCACCCTTGAGTGTTTAGAATGTGGCAAAGTATTTGTGCGTAGCAGTCACTTGAAGCGTCATCAACTGACACATTCCTCGGAACGTTTCCAGTGTAGCTCGTGCGATAAAACATTCTTGCGTCCCGATCATCTGGAGCGACATCAGTGGAGACATACCGGGGTCAAAATCTTCAAGTGCGAGTTATGTCCCAAAGATTTTGTGAAGGTGGAGGATTTGGAGCGTCACGGTCGCACCAAGCACGGCGGAGGGGGTGATGGCGAGTGTTTGAGATGTCTGTTGTGCGATCGCGAGTTCACCACTCGTCGTTATCTGGAGGTTCACATGAAGAGTCATAGTAAACGTGCTTTTCCTTGTAAAATGTGTTCCCATGTTTCGGAGAATAAAGAGGAGGCGCGCGCCCATACTCAATGGCACAGAGCCACGGAGCGTCCGTTTTTGTGTTCCGAGTGCGGTCAGGGATTCACGAGAGACGCTTATCTCACCGTGCACATGAGGCGCCATCGCGGTGAGAAACCCTTTTCGTGTACTTATTGTGGGAAAGGCTTTCCGCGACGATCCGATCTCGATATTCATCAACGTTATCACACAGAGGACAAAAGGCATGTGTGTGCCGTATGTGGTAAAGCTTTTCACCGTCAATATAACTTGAAGGTTCATTTGCGTGTCCACACTGGGGAACGGCCGTACTGCTGTTCATATTGCAGTAAGGCGTTTGCTCAACCCAACGATCTGAAAGCTCACGTACGACGTCACACCGGAGAGAGGTTTGCCTGTGAAGTATGTTCCGCAGCTTTCGTCCACGGATATCATTTGACGCAACATCGTCGTCAAGCTCATGGTCTGGATGCTCCCTCTCACATACGTCGTCTCTCAAAACATCCCGCTCCTCCCCCTGCTGCACCCCCAGCCCCACCCACTCGAGGTAGAGCCCACAAAGCACACCTGCAGCTGGCAGCTCACATGGCGGCCATATTGGCTCAACAGCAAGGTGGGGGAGGGGCCATTTTACCTTCAGAAACGGCTCCTCTCTCCTGA
- Protein Sequence
- MFASSTGLYISEDDIFPHRICSQCAERLRSAYLFRAMCRESDEKMRRVSGIGGSRRDFSTQTPSEDCPQGHHCPECQKKFSSAWGLSVHSRRHLTERAVTCVHCGRLYRDAESLTAHTEGAHGAVDLCCGRCQRHFSRLKRYKKHIAEGGCDITAKEEPVSDNGVWGPDVPIKEEPPEEPNRNQRDLSDDDRDDFTAVKEESTEADYEAEVATVKAISSRGRRRISRLIPLEEHPCSKCPRVFSSAEHLTVHEAKHVVKPTLECLECGKVFVRSSHLKRHQLTHSSERFQCSSCDKTFLRPDHLERHQWRHTGVKIFKCELCPKDFVKVEDLERHGRTKHGGGGDGECLRCLLCDREFTTRRYLEVHMKSHSKRAFPCKMCSHVSENKEEARAHTQWHRATERPFLCSECGQGFTRDAYLTVHMRRHRGEKPFSCTYCGKGFPRRSDLDIHQRYHTEDKRHVCAVCGKAFHRQYNLKVHLRVHTGERPYCCSYCSKAFAQPNDLKAHVRRHTGERFACEVCSAAFVHGYHLTQHRRQAHGLDAPSHIRRLSKHPAPPPAAPPAPPTRGRAHKAHLQLAAHMAAILAQQQGGGGAILPSETAPLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -