Mang044131.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Molanna angustata
Gene Symbol
-
Assembly
GCA_963576475.1
Location
OY754983.1:15937952-15962530[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 1.8e-06 0.00023 23.1 0.8 3 23 137 157 135 157 0.97
2 16 1.2e-05 0.0016 20.5 1.7 2 23 164 185 163 185 0.96
3 16 1.3e-07 1.7e-05 26.7 0.4 1 23 191 213 191 213 0.98
4 16 8.9e-06 0.0012 20.9 0.5 1 23 219 241 219 241 0.98
5 16 5.8e-05 0.0075 18.3 3.7 1 23 247 269 247 269 0.97
6 16 0.00011 0.015 17.4 0.8 2 23 276 297 275 297 0.96
7 16 0.00017 0.022 16.9 3.2 1 23 303 325 303 325 0.98
8 16 0.00021 0.027 16.6 0.5 1 23 331 353 331 353 0.97
9 16 7.7e-08 1e-05 27.4 1.5 1 23 359 381 359 381 0.99
10 16 3.1e-06 0.00039 22.4 0.6 1 23 387 409 387 409 0.95
11 16 5.2e-05 0.0068 18.5 1.5 1 23 631 653 631 653 0.98
12 16 0.011 1.4 11.2 0.2 2 23 660 681 659 681 0.97
13 16 0.0018 0.23 13.7 2.8 2 23 688 709 687 709 0.96
14 16 8.7e-06 0.0011 20.9 1.7 1 23 716 738 716 738 0.97
15 16 1.5e-06 0.0002 23.3 1.1 1 23 744 766 744 766 0.96
16 16 1.9e-05 0.0025 19.8 0.2 1 23 772 794 772 794 0.95

Sequence Information

Coding Sequence
atggataGTTGCATGTCTGTCGATGACATAAAATTGGAGGGAAATGTAGATGATACCATAGATACCAAAGATTTGCTgaatatcattaaatattcCGACGATGAGGATCTCAGTATTGCCGAgctaaaaaaattcaataatacaaataattgtttgaattcagaCAACACTGTAGCTAATAATAAGATTATTAAGAAACGAGGACGGCCTAGAAAAAAACCTGTATGCGATGATAGAACAACATTAattaatgtcaatgattttaaAGATAAGTGttcgaaagaaaaaaatgaagttAGTTTGGAAAAAGAAATTGAGGATaagtttaaaagaaaaaaaaagaaaaagtcaAAAAAAAGCAAAGAAAAAGGACATTTTGACGAATTAAATGGAACGAAATTGTGGGCATGTAAATATTGCGATAAGAGCTATACGCAAAAGAACGCTCTGAAGCTACATTTGCGGATGCACAGCGGTCAAGATTTGCTCGAGTGTCAACATTGCGATAAGAAATTCACTGTCCGCAGTAAGCTGGCCTCCCATATGCTGGTCCACACGGGTGAGCGACCATATCCTTGCGAGTATTGTCCGAAGAACTTTTCAGACAAAAGCACCCTGATAAAACACGTTAGAATCCACAAGCAAGAATATCCGTACGTCTGTGAATATTGCCAAAAgaagtttatacaaaaatctGGGTATGTAGCACATTTGAAGATACACACGGGCAAAGATTTGTTCAACTGTCAGTATTGCAGCAAAAAGTTTAACagaaAGTCCAGTTTGGTGTCTCACACGAAACTGCACACGGGCGAGCAGCTGTGGAAGTGCAGCGTGTGCGGGAAGATGTTCGCTGTCCACAGTAAACTGCTGTCCCATCTGAAGGGGCATTCGGGCATCCGGGAGTTTCGTTGCGACATATGTGACCGCAGCTACACGGAGAGGCACACCCTGCTGACACACTATCGATTGCACACGGAGGGGAAACAGTACGCTTGTCAGATGTGTGCCAAAAAGTTCAGTAAAAAGGTGTCATTAGACCGCCACATCTTGATTCACAGCGGAGTCAAACCATTTCAATGTTCAGAGTGCGGCAAGAAGTTCACGCAAAAGAGTCAGATGCAggcacacgcacgcacgcacacctCTGACCGACCGTTTCTATGCGATTACTGCGGTAAAAGCTTCCAAAGGAAAGACGCCTTGTTGGCGCACCGTAAGATACACACGCTCCACAGCATCGTTCACTCGAAAGGGACAGACACGTCTGCGAAGGGGACTGCTCCTGTACTGTGCGGGATTGATGGGAAGCCGCTCTATCCACCAACAGAAGAGGAAGGAAAGGTTGATGTGGAAATGAAGGAAGCATTGGtgacagaaaaatatagttttgaTCAAGTTTGGAAGTCCCAAGATATTCCAATATCTGTGCCTATCGATGCTCCCATTCCTGTTTCAATGTACAATGCTACATCGCAGGACGTGGCAGTGTCGGTTCCCATCAGTGAGGAGGAAAAAGCACTGCTGGGGACGCTGGAGCAAGGGTCTTTCAGTGTGGTCGTTGACACAGACGCTAGAGACTGCGAGGATTACATCCCAGACGACAATGGCTTCCAGGATAACAGTAGCGCCAGCAGCAGTAACGGTTCTTCGTCCAGTGATGATAATTCATCATCCGACGACTCCAGCAGTGAATCTGAAGACGAGGATCAACCTGACAAGCCGATAGAGGTCTTGAAGAGTCTGATCGATCAGCTGTCCAACGAGGTGTTAACCAAGGACAAAGACCCTGCGAGCGGCAGAGAGCAGAAGATGCAGCAAGTGAAGCAAGAGCGAGAGGAAGACATCGAAGACAAAGAAGATACGGCAGCCAATGGGAAGAACAAGAGATATACTTGCCACGTATGTGCCAAGAGCTACGTGAAGAACAGCGGACTCTCTATGCACATGAGGCTGCACACGGGTGAAAACTTGATCAAGTGTGCCAATTGTCCCAAGGTGTTTGTGGCAATGAGCAAATATCTGTCGCACCTGAAGTCTCACACGGGTGAACGTCCATGGAGCTGTGACATATGCGACCGCCGCTTCATGGAGCGTCATTCCCTACAAGCTCACTATCATATGCACATAAACGTGGAGAAACCGTTTGAATGTTCACATTGCGGCAAACAATTCACCAAGAAGATATCTCTCGAACGGCACGCCCTGATCCATACTGGGGTACGTCCGCACGCCTGCAACGAGTGCGGTCGGCGCTTCACTCAGCGCAGCCAGCTGGCATCGCATGCGCGCGTCCATAGCGGAGAGCGACCATTCCTGTGTGCGTACTGTGGACGCGGATTCGCCCGGCGCGACGCTCTTCAGACGCACGCCAAGACACACACCCTGGGGCACCTGGTCAAGGGGCAGAAGTACAAGAGGGGAGGGGGAGCGACAGTGAAGGATCGCCCCATTATGCAGACAGATACCATTGTGATTACAAAAGTTtag
Protein Sequence
MDSCMSVDDIKLEGNVDDTIDTKDLLNIIKYSDDEDLSIAELKKFNNTNNCLNSDNTVANNKIIKKRGRPRKKPVCDDRTTLINVNDFKDKCSKEKNEVSLEKEIEDKFKRKKKKKSKKSKEKGHFDELNGTKLWACKYCDKSYTQKNALKLHLRMHSGQDLLECQHCDKKFTVRSKLASHMLVHTGERPYPCEYCPKNFSDKSTLIKHVRIHKQEYPYVCEYCQKKFIQKSGYVAHLKIHTGKDLFNCQYCSKKFNRKSSLVSHTKLHTGEQLWKCSVCGKMFAVHSKLLSHLKGHSGIREFRCDICDRSYTERHTLLTHYRLHTEGKQYACQMCAKKFSKKVSLDRHILIHSGVKPFQCSECGKKFTQKSQMQAHARTHTSDRPFLCDYCGKSFQRKDALLAHRKIHTLHSIVHSKGTDTSAKGTAPVLCGIDGKPLYPPTEEEGKVDVEMKEALVTEKYSFDQVWKSQDIPISVPIDAPIPVSMYNATSQDVAVSVPISEEEKALLGTLEQGSFSVVVDTDARDCEDYIPDDNGFQDNSSASSSNGSSSSDDNSSSDDSSSESEDEDQPDKPIEVLKSLIDQLSNEVLTKDKDPASGREQKMQQVKQEREEDIEDKEDTAANGKNKRYTCHVCAKSYVKNSGLSMHMRLHTGENLIKCANCPKVFVAMSKYLSHLKSHTGERPWSCDICDRRFMERHSLQAHYHMHINVEKPFECSHCGKQFTKKISLERHALIHTGVRPHACNECGRRFTQRSQLASHARVHSGERPFLCAYCGRGFARRDALQTHAKTHTLGHLVKGQKYKRGGGATVKDRPIMQTDTIVITKV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-