Mang029594.1
Basic Information
- Insect
- Molanna angustata
- Gene Symbol
- -
- Assembly
- GCA_963576475.1
- Location
- OY754976.1:4905312-4910804[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.7e-08 1.3e-05 26.5 0.0 2 38 69 105 68 108 0.91
Sequence Information
- Coding Sequence
- ATGTACATAAAAATCAATTGGCTAACAGCGTTGTCTAATATCGCTCCGCCAGATCTACGCAGAATACATGCTACTGTCAGAgagacaaataaaatagaaaacaatCCTCACTTATCGGCTTTTGATGACATCTTCCACCCGCCCCAAAAGAGCCTAAAATCCGTGCCTCGAAGTAAATCGGGAAGAAAAAGAGAGAAAGTATGCCGCGAAACACTTGAAGAAGCTGTGAAGGAAGTATTAAATGGGAGTTCCATAAGAAAAGCTgcagaaaaatttcaaataaatagatGCACAATTTTTCactatgtgaaaaaaaataaatgtaatccTGTTAAAGATATTACGATAGCACCACCTAATTTTGCAGTGAGAAAGGTGTTTACCGCCGAGGAGGAAATTTTACTCTTCAATTATATCAAAAAAGCTGCATACCTGCACCTCGGACTTGATGCATTACGTGTAAGAACACTCGCCTACAAATTTGCGATAgtgaataataaaaagattCCACCTTCATGGGATAACAATCAAATAGCAGGAACAGAATGGCTTGTTGGATTCAGGAAAAGATTTCCTGACTTATCACTACGAAAGCCAGAAGCGACCAGCATAGCCCGAGCAACAAGCTTTAACAAATACAACGTGggaatgttttttaaaaatttaaaagaagtGATGGAGCGATATAATTTTCAGCCGCAAAACATCTATAATTTAGACGAAACTGGAAATTCTACTGTCCATAAGCCGGACAAAGTTTTGGCACCGAAAGAAATAAGGCAACTTGGTAAATTGACTTCAGCTGAACGTGGCGAAAACGTCACAATGATTGCATGTGTAAATGCTGTTGGAAATTCTGTTCCACCCATGCTCATTTTCCCCAGAGTGTATTTTAAGAGCAACATGATTAAAGGAGCTCCTCCAGGAACTATTGGAGGAGCCAATCGTTCTGGTTGGTCAACAGAATTTCTGTTTCGACAATACttagaacattttatatttcatgttaAACCATCTCAAGAAAAACCAATACTTTTAACAATGGACAATCACGAATCCCATATTTCCATAGAAATTATTGACATTGCAAGAGATAATGGCATCATTATTTTAACCCTCCATCCACATACCTCACATCGTATGCAGCCTCTAGACCGAACTATTTTCGGCCCGTTCAAGAAATTTTATGCTAAATCAGCGGAGCAATTCATGATTAATCATCCTGGACAACCAATAAAAATTACAGACGTCGCTGAACTAATAGGTAATGCCTATGCTTTGGCATTTAACCCAAGCAACATAATAAAAGGATTCAAAGTTACTGGTATATGTCCTTACAATGACTTAATTTTTAGCGATGAAGACTTTCTGTCTTCTTTTATAACTGATCGCCCTCAGTCTCTTTTACCATCTGAACCTCGATCGGAAGGCACTCATTCTACGGAGTCACCAGCCACTATTACATCTTATCACGATTACGAAAATATCATGGGTACAGAACTGTTAATGAACGTTACAGATAATCCTGATGGTGACACCTGTACTGGACCAGAACGATTCAACCAGACACCGCAAAAGAATGATTCTAAAAATATGTCTACAATTTTACCAGACATTGTAATTCCATTTCCTAAGGCAATTGCGAGAAAAGGTACACGAGGAAGGAAGAAGGGTAAAACCAGAATCCTTACTGATACACCAGAAAAGCAAGAAATTCTTGCAAACAAAAAACTGAAAGAAAACAACGATCAGAAAAAAATCACCCTacctaaatttaaaattcagaaCGAAAGTAAGCTCAGCTCATCAAAGAAATCAAACAACATGCCAGGAACGAGCCGATCATACCATAATCCCAATAAAGTTAAGATACTTCAGGACATAAGTATTGTGGTGGCATGGATAAAGTCGGACACAAAAACAGTTCTGGCGATCCACACGCATATGGTGGCACTCAACCCTCGCCTCTCTGTGTCACACAACGGCCACGACACCTGGAAACTGTACATCAGCAATGTCCAGGCCAACGACTCTGGCATATACATGTGCCAGGTCAACACGGATCCCATGAGAAGTCAGCACCCCCCTAGGGTTGCTTTAAATCTTCCATCCGTGGTAAAAAGAATGGAAACAGAATAG
- Protein Sequence
- MYIKINWLTALSNIAPPDLRRIHATVRETNKIENNPHLSAFDDIFHPPQKSLKSVPRSKSGRKREKVCRETLEEAVKEVLNGSSIRKAAEKFQINRCTIFHYVKKNKCNPVKDITIAPPNFAVRKVFTAEEEILLFNYIKKAAYLHLGLDALRVRTLAYKFAIVNNKKIPPSWDNNQIAGTEWLVGFRKRFPDLSLRKPEATSIARATSFNKYNVGMFFKNLKEVMERYNFQPQNIYNLDETGNSTVHKPDKVLAPKEIRQLGKLTSAERGENVTMIACVNAVGNSVPPMLIFPRVYFKSNMIKGAPPGTIGGANRSGWSTEFLFRQYLEHFIFHVKPSQEKPILLTMDNHESHISIEIIDIARDNGIIILTLHPHTSHRMQPLDRTIFGPFKKFYAKSAEQFMINHPGQPIKITDVAELIGNAYALAFNPSNIIKGFKVTGICPYNDLIFSDEDFLSSFITDRPQSLLPSEPRSEGTHSTESPATITSYHDYENIMGTELLMNVTDNPDGDTCTGPERFNQTPQKNDSKNMSTILPDIVIPFPKAIARKGTRGRKKGKTRILTDTPEKQEILANKKLKENNDQKKITLPKFKIQNESKLSSSKKSNNMPGTSRSYHNPNKVKILQDISIVVAWIKSDTKTVLAIHTHMVALNPRLSVSHNGHDTWKLYISNVQANDSGIYMCQVNTDPMRSQHPPRVALNLPSVVKRMETE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01012190; iTF_01012191; iTF_01012192;
- 90% Identity
- iTF_01012190;
- 80% Identity
- -