Mang005322.1
Basic Information
- Insect
- Molanna angustata
- Gene Symbol
- bab1
- Assembly
- GCA_963576475.1
- Location
- OY754965.1:32383541-32412325[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.00011 0.058 14.8 0.0 1 38 301 338 301 344 0.86 2 2 4.6e-08 2.3e-05 25.7 0.0 4 35 615 645 615 652 0.92
Sequence Information
- Coding Sequence
- ATGTCTCTTCCGCCGCAACAGTTTTGTGTGAGGTGGAACTCCTACCATACGAACCTTCAAACTGTTTTCCCCAAGTTGTTGACTACGGAGAACTTTGTGGATGTTACCTTGGCCTGCGAGAATAGACAGATCAAGTGTCACAAGGTTGTGTTGAGTGCCTGCTCTACCTACTTTGAAAAACTCTTGATACAGAATCCTTGCAAACATCCCATCATCTTCATGAAAGATATGAGattttcaGAAATGCAATCTCTGGTTGATTTCATGTATAAAGGTGAAGTTAATGTATCACAAGATGATCTACCTAGTTTATTGAAGTCTGCAGAGGCCCTTCAAATAAGAgGACTTTGTGGATCGGAAAATTCAAACAGTTCAAACGGATGCCAAGAAAGTATTCCACCTCCCAACTTAGCCATACCACCCCCATCTAGCAGTAGCAGTCATATATCTACAGCTACTTCACCACGTGATGCATCAGAACCATTCAATACCTCAAATAATTctGTCAAATCAAATTCTAACCTACCTCCTTCACCAAATGCATCATCAAATGCTTCAAATTCACCCTTAAGTAATGGAATGGCTCGCTGTGATAAAAGGAAAAAGGTCAATGGTGGTAATGAAGAATGTCCCGATGCCATTAAACTGAAACAAGAAACTGTTGAAGAAGATGGTTTATACTATGGTGACATGGAATGTGGCCAACAGGAAGATGATGAATTACTTCAATCTGGCAGTGTTGGCAGTCAACCACCTTCTGAAGGCATGGATTTACTAGACTATTTAGATCCTGGAGATTTGGATCAATTTTTAGCTGGAAAAGAAGTTAGCTCTTCCGGTCTATCTCGTTCAGCTATAGAACAGGCTATGTTAGGTAAATATAATCCTAATAGACGATATTCTAATGAAGCTATGTGGGCTGCACTGATGGATGTGAAGAAAGGAGGTAGTATTTatagAGCTGCTCAAACTCACAAAGTACCCAGAAAGTCACTTAGGAATTGGATGAAAAGATGGCATATTAAATCATCATTTCCCATGCCACAGCAATTACAGCAGTTTGTTGAAAAAAACAGGAAACACAAAATGGAATTAAGAAGAGAACTAACAAATACATTGTTATCTTTAAGTGCTCGAAACAAAATGCTTGATTTTGAGCAAGACACTAATTCTATTAAATGTGAAAATGACGATTCAAAAGATGTATTTAGTCAAGATATAGATGACATTAACAAACCAAATGATTTTGTTGACAAAGATATGGTTTTagatttgaaaattaataaacagtCCGAACAATGCTCATTAAATATTGataccaataaaaaaataaatgattctAAGAAAACTATTGGTCATGGTTCAATTACAGAAAACGACATTGAACCAAATGCATTGTGTGGACAAATTATAGACATGGCTGGAAATGTATTATTTGATGATAATGTCAATGAATCTCATATTGATGAATTATATAAGGATGATgttgTTGCCACACCGTTCCGTCCATATGACATGGAAGTCCAGAAAAGCCGAGAACTGGATGCTGAATCATACATAAGACAGGCACTAATTCGCCACTTGGGCTTATATGATAATAGTGAAAATACCACGAGAATAAAACCTGAAGTCAATTTTCCTGATATATCAGGACTGCCTAGTTTGAAAGATAATATATCAATTAGCCAAGACAAAGTTATGACTTCTCAAGAtgtctttaaaaatatatttcttaatccATCGTCTCGGCCGCATTTAGGTGACATTAGTGACAGTATTTTGGCGCAAGATATTTCTGTTGACCTACAGAACTCCAAATCATATAAACGTTACACTTCTTTAAATCTAAAAGAAGCTTTGATCGCAGTCAAGAATGGTACAAGTGTCTATGGAGCTGCTAAAAAATACGGAATACCAAAGAAAACTCTGAGAAATTGGatgcaaaaatataacataaaaagtcAGTTTTCAAGAGAAAAGAAAGACTCGCGTTTGCAAGATTTAATGATGGATTCAGATTTAATCAATTTATCAGCTAACTGA
- Protein Sequence
- MSLPPQQFCVRWNSYHTNLQTVFPKLLTTENFVDVTLACENRQIKCHKVVLSACSTYFEKLLIQNPCKHPIIFMKDMRFSEMQSLVDFMYKGEVNVSQDDLPSLLKSAEALQIRGLCGSENSNSSNGCQESIPPPNLAIPPPSSSSSHISTATSPRDASEPFNTSNNSVKSNSNLPPSPNASSNASNSPLSNGMARCDKRKKVNGGNEECPDAIKLKQETVEEDGLYYGDMECGQQEDDELLQSGSVGSQPPSEGMDLLDYLDPGDLDQFLAGKEVSSSGLSRSAIEQAMLGKYNPNRRYSNEAMWAALMDVKKGGSIYRAAQTHKVPRKSLRNWMKRWHIKSSFPMPQQLQQFVEKNRKHKMELRRELTNTLLSLSARNKMLDFEQDTNSIKCENDDSKDVFSQDIDDINKPNDFVDKDMVLDLKINKQSEQCSLNIDTNKKINDSKKTIGHGSITENDIEPNALCGQIIDMAGNVLFDDNVNESHIDELYKDDVVATPFRPYDMEVQKSRELDAESYIRQALIRHLGLYDNSENTTRIKPEVNFPDISGLPSLKDNISISQDKVMTSQDVFKNIFLNPSSRPHLGDISDSILAQDISVDLQNSKSYKRYTSLNLKEALIAVKNGTSVYGAAKKYGIPKKTLRNWMQKYNIKSQFSREKKDSRLQDLMMDSDLINLSAN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01012517;
- 90% Identity
- iTF_01012517;
- 80% Identity
- iTF_01012517;