Mang022285.1
Basic Information
- Insect
- Molanna angustata
- Gene Symbol
- -
- Assembly
- GCA_963576475.1
- Location
- OY754972.1:29855501-29870647[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1e-09 5.2e-07 31.0 0.0 4 39 203 239 203 243 0.90 2 4 5.6e-11 2.8e-08 35.0 0.1 2 39 255 292 254 295 0.93 3 4 1e-15 5.2e-13 50.2 0.0 2 45 310 354 309 354 0.97 4 4 2.1e-17 1.1e-14 55.6 0.0 1 42 361 403 361 404 0.95
Sequence Information
- Coding Sequence
- ATGACCGGCCACTTGGAGTCTCCTCCCTGTTCTCCCGGTGAAGGGTCTGCAGTGGCTGATGATGGTCAGGAACCATCTTCCCAGAGGGTTATTATGCACACTCGTCATCCACAACACATGGAAACTTTACATAATGTGGACATCGTAAGTGAGTCTGTGAATGGCATAGAATCAGAATATGCTCTTCCTGTTCCAATGGCTCCTGTCGCTACTCCGGTACAAGTTTCATTGATTAATATGGAATCAAATGGACCTTCTgtcattcatcatcatcataattcAGTCTCTGAACACAAtcgtataaataataaaataaaattagaaactCTTCGATCGTTGGATCAACAAGTGACTTTGGATATGGATAGACACATGAACCAAACGAGGAATCCATTAAACATTTGCACATCCACACAGTCCGTTGATTCTAAATCTGAAACAACAAAAAGTAATCATGGAGATCAAAATTGTAGTAATGAAGAGACGCCAATAAGTGATGATGGAAATGAATCGTTGCACGAAGTACCAGAAAATATGATGCATGAAAAAATAGTCTACACAAATCTCAATATCATTGGTAATACTCCTAAGACTTGGTCACAGATAGACATGGATAATGCATTGGACGCTCTGAGGAATCATAACATGAGTCTTACGAAGGCATCAGCTACTTTTGGTATTCCATCTACAACATTATGGCAGAGAGCTCATAGATTAGGAATTGACACACCAAAGAAAGAAGGACCATCTAAATCATGGAGCGAAGGAAATCTTCACAATGCTCTACAGGCACTTAGAACTGGCACCATTTCGGCAAATAAAGCCAGTAAAGCATatgGAATTCCTAGtagtacattatataaaatagcACGTCGAGAAGGAATAAGATTGGCAGCACCATTCAATGCAGCGCCAACCACTTGGAGACCTGGAGATTTAGAGAGAGCACTTCATTCTATACGATCGGGACAATCTTCAGTTCAGAGAGCTTCAACTGAATTTGGTATACCAACAGgaACATTATATGGGAGATGTAAACGGGAAGGAATAGAATTATCTCGTTCCAATCCAACTCCTTGGTCTGAAGATGCGATGGGTGAAGCTCTGGAAGCAGTGAGagTTGGTCAGATGTCAATAAATCAGGCAGCTATCCACTACAATTTGCCATATTCATCATTATATGGTCGGTTCAAGAGGTGCAAATACGAAGatgatattgtcatcATTGTGAGTGGAAAATTTCCAAGTACAGTCTCGGAAGTGACTCAGACAGCTATCCAGACAGTAGAAGAATGGCGCAAAGAAGTCGGACTGAAAATTAACCctaataaagcaaaaattcatTATACCATTCACCAAAAAGAGGAAACTAGAAGGGTTCATTACACCACTCTTTTTGGAAAGCAGATCACGCCTAGCGACCAGGTTAAATACCTTGGAGCTAAAATTGACAAGGGATTAAACTGGAAACAACACGTGGATCACACAATAAATAAAGCTAGCAGAGTTTTTTGGGCATGCAGAAGAACCTTTGGTAAATCATGGGGACTTAAATCCAAAACCCTGTACTGGGTCTAA
- Protein Sequence
- MTGHLESPPCSPGEGSAVADDGQEPSSQRVIMHTRHPQHMETLHNVDIVSESVNGIESEYALPVPMAPVATPVQVSLINMESNGPSVIHHHHNSVSEHNRINNKIKLETLRSLDQQVTLDMDRHMNQTRNPLNICTSTQSVDSKSETTKSNHGDQNCSNEETPISDDGNESLHEVPENMMHEKIVYTNLNIIGNTPKTWSQIDMDNALDALRNHNMSLTKASATFGIPSTTLWQRAHRLGIDTPKKEGPSKSWSEGNLHNALQALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWRPGDLERALHSIRSGQSSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRCKYEDDIVIIVSGKFPSTVSEVTQTAIQTVEEWRKEVGLKINPNKAKIHYTIHQKEETRRVHYTTLFGKQITPSDQVKYLGAKIDKGLNWKQHVDHTINKASRVFWACRRTFGKSWGLKSKTLYWV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -