Basic Information

Gene Symbol
specc1la
Assembly
GCA_963576475.1
Location
OY754984.1:13795491-13813924[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 10 1.7 5e+03 -0.7 9.4 33 58 205 230 195 247 0.50
2 10 0.33 9.5e+02 1.6 1.2 46 59 228 241 224 261 0.53
3 10 9.2 2.7e+04 -3.0 0.0 39 50 269 280 268 282 0.77
4 10 1.2 3.4e+03 -0.2 0.5 29 51 315 341 312 343 0.77
5 10 0.22 6.5e+02 2.1 7.1 26 55 340 369 335 383 0.75
6 10 0.37 1.1e+03 1.4 6.8 25 59 417 451 415 457 0.68
7 10 7.7 2.2e+04 -2.8 0.4 35 47 466 478 458 490 0.60
8 10 0.015 44 5.9 2.7 31 64 516 549 511 550 0.87
9 10 2e-08 5.7e-05 24.7 3.8 19 64 557 602 556 603 0.93
10 10 0.0051 15 7.4 0.8 36 63 588 615 586 622 0.71

Sequence Information

Coding Sequence
atgatgaaaataaaatccCTGTTCCGCAGGGGTCATCAGACCTCCGGAAACAAACACCCGCCGGAAGGGCCGCCCCTCAAGGGCGCCACCTCCGTCTCCAGTTTGGACTCCAAGCACCACAAGGTGGCGCCGGTGCCCAAGGAGAAGACGAAGGTGTTCGGCTCCAAGGACAAGATACATAAGTCCGCCGGCAAGAAGGACAAGGGACTCACCCCGAGCAATGAGACCCTGGACAGCACGCCCGAAGAGATGGAGGGCGGAGACTTCAGGCGCCCGGAGGTAGCCAGCCTGAGGCGGACTAAGAACAACAACAAGATTGAGTTCAGTTCGGCGGACGAGTTGACGGTTCCGACTAACGTCGGCGGTGACGAGCCACTCCTTTACAAGGGGAAGTTGAGCAGTTCTTGTCGTCTGGAGAGGCCGTCCGAAAGTCTTCTACCTTTGGCTGATATAGACCAGCCGGAGTGCAACAGTCTGCCGCCTTTGCTACTCAACCTTCCCATTGTTGAAGAATACCAAAGAACTGCcgagGTTGGCACTGTGACGTCTGATGATATAGTGGTGGTGTTTGGGTCTCCCGTGTCAGAGTCTCAGCTGGAGGAGGTGAAGAAGGAACTGGCCGAGGTGATGAGGGAGAAGGAAGAGTTACAGCGGAGGGTTGATGACCTCATACAGCAGCAGCAAGAAATGGCTGAACTAAGGAAGGAACTGGCTGATCTCAAGATGATCAGCGAAAGGGCGAGTTCAGAGAATGCGGCGTTGCGGGCGAGACTTCGCGGCGTGGCACATTCACCTCTCAGTGACAGCGAAAAGAGGCAGCTACTGCAGGAAGCAGGGCATTGTTCCGCACCTTCATCCATGGCTCAGGATTCTGACGGCGAAGTGTTGACGCCAGATTGGGACAAGCATTCTTCCAGCTCCCTGAGTGAAGTATCGGTGGCTTGTCTTCAGGACAGGATATTACAAATGGAGGAAAACCATTATAGtaCAAATGAGGAATTACAGGCCACCCTTCAGGAGCTGTCTGATCTTCAAAACCAGTTGACTGAGCTACAGGTGGACAATGAGAGGTTGTCCGATGAAAAGTCTGTCCTATTAGAGTCTCTCTGCAGACAGACTGAGAAACTTGAGGATTCCAGAACTAAGGTTGACACACTACAAGAGCTATTGTTACGGGAGGGCAATGAACAGGAAGGATCCACAACTGAAAGAGAACAGAAGCTAGTCTTACTGTTAAAGAGCGGTAGAGAAGAGCGTGAACTGTTGTTGCAGAAACAGGAAGAATTGAGAACTGACAATTTGGAGCTTAGAGAGACATTAGAGTCCACGGTCAAAGAAAATGAAAGACTTCACGAGAGGGTTATgtCAGCGGAATGTACTATAGAGAACAGTAGCGTAGAGCTAAAACAGATGCAGCAGGAACTGTCCTCTGCCAAAGAACTGGCTGGTGCTCGACACGCTCAGCTGCAGCACATATCTGATCTTTTGGAAACGGCCAATGCTAAGaTAAGTGTGTTGGAAAGTAACAATACCAACTCAACCAGCACTCAACAGACAGCCGCATTGCAAAGACAAAATGAAGGTCTGCAGGAACAATTGTCTGCATCTAGGAGGCAGCAGGAGAGGATGTCACATCTATATACACAACTTCAAGAAGAAACTATGGTTGCGAGGAACAATGCAAAGACTGCCATGTCAAACTTGGAGTACCAATGTGAACAGCTGAATCAAGAAAAGGCAGCGCTGCAGTCGGAAATACAATCATTACAGGATACTAACACTGATTTGACATCACAGAACCAATGTTTGACTGAAGAGAAGAGAGCATTGCAGACCGCACTGACAGAGGCACAGAGAGCTACCTTGGCTGCAGAACAGCGTCAGAGGGACACACAAGCCAAACTCACTGTTGAAATTTCAGAGAGGGAAAAAGATataaatgtatTTCAATGGGAAATGCTGTTTACATCGATTTCCTAA
Protein Sequence
MMKIKSLFRRGHQTSGNKHPPEGPPLKGATSVSSLDSKHHKVAPVPKEKTKVFGSKDKIHKSAGKKDKGLTPSNETLDSTPEEMEGGDFRRPEVASLRRTKNNNKIEFSSADELTVPTNVGGDEPLLYKGKLSSSCRLERPSESLLPLADIDQPECNSLPPLLLNLPIVEEYQRTAEVGTVTSDDIVVVFGSPVSESQLEEVKKELAEVMREKEELQRRVDDLIQQQQEMAELRKELADLKMISERASSENAALRARLRGVAHSPLSDSEKRQLLQEAGHCSAPSSMAQDSDGEVLTPDWDKHSSSSLSEVSVACLQDRILQMEENHYSTNEELQATLQELSDLQNQLTELQVDNERLSDEKSVLLESLCRQTEKLEDSRTKVDTLQELLLREGNEQEGSTTEREQKLVLLLKSGREERELLLQKQEELRTDNLELRETLESTVKENERLHERVMSAECTIENSSVELKQMQQELSSAKELAGARHAQLQHISDLLETANAKISVLESNNTNSTSTQQTAALQRQNEGLQEQLSASRRQQERMSHLYTQLQEETMVARNNAKTAMSNLEYQCEQLNQEKAALQSEIQSLQDTNTDLTSQNQCLTEEKRALQTALTEAQRATLAAEQRQRDTQAKLTVEISEREKDINVFQWEMLFTSIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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