Mcic012652.1
Basic Information
- Insect
- Mochlonyx cinctipes
- Gene Symbol
- stc
- Assembly
- GCA_001014845.1
- Location
- JXPH01075161.1:1-2914[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.75 7.6e+03 -2.7 1.1 15 18 249 252 248 253 0.81 2 11 1 1.1e+04 -3.2 1.6 15 19 276 280 275 280 0.81 3 11 0.021 2.1e+02 2.2 0.4 4 13 309 318 308 319 0.83 4 11 4.6e-06 0.047 13.9 16.6 4 19 323 338 321 338 0.93 5 11 4.8e-05 0.49 10.6 11.3 1 18 374 391 368 392 0.90 6 11 0.78 8e+03 -2.8 0.5 5 10 421 426 421 426 0.87 7 11 1.3e-09 1.4e-05 25.2 12.1 1 19 432 450 432 450 0.99 8 11 0.86 8.8e+03 -2.9 0.4 6 10 481 485 481 486 0.91 9 11 0.0019 19 5.6 14.2 1 18 491 512 491 513 0.86 10 11 2 2e+04 -4.5 1.6 5 10 542 547 542 547 0.87 11 11 1 1e+04 -3.2 11.5 1 11 553 563 553 575 0.88
Sequence Information
- Coding Sequence
- ATGAATTCCGAAAACAATCATAGATTTCCTGCACCTCACTCGTCTGAAAATTCAAGGAATATCAATCAGGAATATCTACTAAATGATTATGAAAATCCTGTGTCTCCAGCAAATCTATTCCCCCCGCATAGAACCTCAAACTTAACACCCACAGCAGCTGAATTTGTTCCAAGGCGATATGATAATGCGGGTCATAACAAAAGCTACGCTGGTAGAAATGCAGCTGTGAATAATCATCATTATCATAACTACTCATCAACATACAACGGAAAAACTCCCATCAGACAAGAACAAAATCTGGGAGCGATTCGAAAGCATTCAAGGGATCggaatttaaatgtaaattcgCATTACTTACCAGAACCCAGCACAAGCAACTATCAACCATCAAATGATTATAGAATGCAAAATAATAACTACGATCGAAGATATGATAATTTTGCAATATCAGATActaaattctataaaaataataagcagCAAAATTTTAGGGGGAAATTTCGCAtgcctcaaaataaaaaatcttataaCAATTACGATACCAATCCTAGCTATCACTACTCCCAATCTCCTCATCAGCAGCATCAATCACAGAGCAGAAATTTGCGAGTAGACAGAATTGTTGAAGCTAATATAATATCCAAATGCTCTCaaagagaaaaattaattcGAGAAATAGACTCTTCGAAATTAGAATGCTTGGTTTGTTGCGACAACGTAAAGCCAACTCAGGCAATATGGTCGTGCCCAAACTGTTATCACATCTTACATTTGAATTGCATTTCAAAATGGGCAACAAGTTCTAAATCAGAAGATGGTTGGCGTTGTCCGGCATGTCAAAATATTACAAAGAATATTCCAAGAGATTATTATTGTTTCTGTAACAGAGTAAAAAATCCGCAATACAATAGAAACGATGTGGCGCATAGTTGTGGGGAGTTATGTGGACGCGGAAACGTTTGCGATCATCCATGTACATTATTATGTCATCCTGGTCCATGTCCTCCATGCCAAGCAAGCGTCGAACGATATTGTGGATGTGGCAGTACTAAAAAGACTTTACAATGTTGCCAGAAAGAGGAAATAGTATGTGATTCTGAAtgtggaaaaatattgaattgcaATATACACAAATGCACTGAAAAATGCCACTCTAGTGAATGTAAAGCGTGTGAAATTCAAATTGCCCAAGAGTGCTTTTGCACGAAAAAAACTATTCAAAGTGCATGCACCGATGAAAACCGGTTGAATAATAAATTCACATGCGGAGAAATTTGCAACAAGCAATTGAGTTGCGGAAATCATAATTGTGCGGCAATTTGTCATACTGGAGAATGCGGCGTCTGTCCCTTGTCCCCAGATTTAATAACTTCCTGTCCTTGTGGTAAGCAGATAATAGTGAAAGAGGAACGAAAAAGTTGTTTAGAAGCAATTCAACTATGTAAAAGTGTTTGTGGTAAGGTTTTGCCATGCGGTAAACCAGGTGCACATCATACTTGTGTAAGTCGCTGTCATTTGAAGGAATGTCCACCTTGTAATAAAATTACGACAGTGAAGTGTCGTTGTGGACACATGGATCAGCAGGTGAAatgtaaaacattaaaaacacgTTGTGACGATGCCAGATGTAAAAAAAGATGTAGCAAACTTAGGAGCTGTGCAAAGCATAAGTGTAACCAGGAGTGTTGTATCgaaattgatcacatctgtcCATTGCCGTGTTCGCAAACATTAAGCTGTG
- Protein Sequence
- MNSENNHRFPAPHSSENSRNINQEYLLNDYENPVSPANLFPPHRTSNLTPTAAEFVPRRYDNAGHNKSYAGRNAAVNNHHYHNYSSTYNGKTPIRQEQNLGAIRKHSRDRNLNVNSHYLPEPSTSNYQPSNDYRMQNNNYDRRYDNFAISDTKFYKNNKQQNFRGKFRMPQNKKSYNNYDTNPSYHYSQSPHQQHQSQSRNLRVDRIVEANIISKCSQREKLIREIDSSKLECLVCCDNVKPTQAIWSCPNCYHILHLNCISKWATSSKSEDGWRCPACQNITKNIPRDYYCFCNRVKNPQYNRNDVAHSCGELCGRGNVCDHPCTLLCHPGPCPPCQASVERYCGCGSTKKTLQCCQKEEIVCDSECGKILNCNIHKCTEKCHSSECKACEIQIAQECFCTKKTIQSACTDENRLNNKFTCGEICNKQLSCGNHNCAAICHTGECGVCPLSPDLITSCPCGKQIIVKEERKSCLEAIQLCKSVCGKVLPCGKPGAHHTCVSRCHLKECPPCNKITTVKCRCGHMDQQVKCKTLKTRCDDARCKKRCSKLRSCAKHKCNQECCIEIDHICPLPCSQTLSC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -