Basic Information

Insect: Mochlonyx cinctipes
Gene Symbol: ZIPIC
Assembly: GCA_001014845.1
Location: JXPH01079725.1:4700-6802[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1.7 72 4.3 1.9 2 23 135 157 134 157 0.91

2 15 7.4 3.1e+02 2.3 0.2 2 11 175 184 175 189 0.87

3 15 0.25 10 7.0 0.2 3 23 209 229 207 229 0.93

4 15 0.047 1.9 9.3 0.3 1 19 241 259 241 261 0.94

5 15 0.0086 0.36 11.6 1.2 3 21 325 343 323 346 0.88

6 15 0.013 0.55 11.0 0.6 2 23 391 412 390 412 0.91

7 15 0.11 4.4 8.1 2.4 1 22 425 446 425 449 0.89

8 15 0.017 0.69 10.7 0.2 2 23 471 493 471 493 0.97

9 15 7.6e-05 0.0032 18.0 1.4 1 20 507 526 507 528 0.95

10 15 0.012 0.48 11.2 0.8 1 23 535 558 535 558 0.93

11 15 1.7 72 4.3 3.6 1 23 563 585 563 585 0.98

12 15 0.12 5.2 7.9 0.5 2 23 590 611 589 611 0.93

13 15 3.5e-05 0.0015 19.1 1.4 1 23 617 639 617 639 0.97

14 15 0.0012 0.051 14.2 2.6 1 23 645 667 645 667 0.96

15 15 0.018 0.75 10.6 1.2 1 15 673 687 673 689 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1.7	72	4.3	1.9	2	23	135	157	134	157	0.91
2	15	7.4	3.1e+02	2.3	0.2	2	11	175	184	175	189	0.87
3	15	0.25	10	7.0	0.2	3	23	209	229	207	229	0.93
4	15	0.047	1.9	9.3	0.3	1	19	241	259	241	261	0.94
5	15	0.0086	0.36	11.6	1.2	3	21	325	343	323	346	0.88
6	15	0.013	0.55	11.0	0.6	2	23	391	412	390	412	0.91
7	15	0.11	4.4	8.1	2.4	1	22	425	446	425	449	0.89
8	15	0.017	0.69	10.7	0.2	2	23	471	493	471	493	0.97
9	15	7.6e-05	0.0032	18.0	1.4	1	20	507	526	507	528	0.95
10	15	0.012	0.48	11.2	0.8	1	23	535	558	535	558	0.93
11	15	1.7	72	4.3	3.6	1	23	563	585	563	585	0.98
12	15	0.12	5.2	7.9	0.5	2	23	590	611	589	611	0.93
13	15	3.5e-05	0.0015	19.1	1.4	1	23	617	639	617	639	0.97
14	15	0.0012	0.051	14.2	2.6	1	23	645	667	645	667	0.96
15	15	0.018	0.75	10.6	1.2	1	15	673	687	673	689	0.92

Sequence Information

Coding Sequence: ATGTGTAAATCATGCATCAGTCAACTAGAAACGGCGTACAGTTTCAAGACGCAGTGCATCGCCGCGGATAAGAAATTGAAAAGATTGTTCACTGAAACTACCGTTGCTTTCGAATTTATTTCAGAGCCAATAGCTACACCAGAAGATTCTGAGTGCATGAGAATCAAACAGGAACTGAAAAACGTGTACGAAATACTAAACACAATCGAAAACGAACCGTGTACGGATGACAATGAGTTAAAGGTATTGTATCAGTTGCAGAAATCGCTGAAAAGGGCCGAAGAAGTTGTGAAATTGTCTTGCGCCAAAGAAAAGAAACAAGAAATAATTCCGAAAATCAAAACCGAAGTTGTACCTCAAGATATTTCAGACGATGATATTGATGGTAGAAATGAATTGCTAAAGTGCTGTGGCTGCCCGGGAATTTTTCCCAGTATGAAATGTTTGAAGAATCATGCGGAAAATATGCATAAGAAAGAAGTAGCTCCATTAACGAGAAAAGAGCGTGAGAAAACGGTGCGTCAATGCAAGATTTGCTTTGAAACATTCATTGGAAGGCAGTATATCGAGCAAGGACATTCTAAAACTGATTTCATAAACCGATTGAGGATTGTGAATATTGCTTGTTGTGGTTGCAACGGTGTTTTTGATTCAACAGAAGCGCTCAAAACCCACGCATCTGAACACCTTGATAAGAAAACGGTGAATCCGGCTATGCCTTTTGAGTGTGAAATCTGTTTCAGAAGATTTTCAGCTAAAAGAGGATTGTCTGATCATAAAGTACATAGTGTAAGacgaaaaattgaattgattaaTAATAGTAATGCAATGGCTTCAAAAGTTGAGAACGAAGAGTCAATTTCTTTTGAACAAGTCGAGTATTTGGAAGTAGATGAGCCTTTTTGTGATGAAATGGTAACCGAAATAGAAGTCGATACACAACGTTCTGGCAACAGGAAGACACCGCTCGATTGTTGTGGATGTGAAATGTCCTTTTTCTCGTCCGACCAGTTGAAGAGGCATGGCATTGCTAAACATAAAAAGCCTCACGTTATCGAAGATCCAAATGTAACAGTTAAACAGTGCATAATTTGTTTCGAGTCCTTTCCAATGCCAAACTCGAATCCACCGCCAGGTCATTCGCAATCTCGTCTAAAACTTGTTAGTATTCCATGTTGCGGCtgtgacaaaaattttgattctttgATGTCACTCGCAAAACACTCTGAAGAGCACATACAAAATAAGTTGGACGAGGACCAGGAAAAACAGTTTGAATGTGGTTATTGTTTCAAAAGATTCATGAATAAGAGGCAACAAGTTGAACACAGAAAGAATATAAAACATATAAGATCTTTGCTGCGAAAGGAGGACAAGCCGAAATATGAGCTGGAGGATACAACAGAAGCAAGATGTTGTGGTTGTAAAGAGGTTTTTGCGGAAATCGAAGAGCTAGAGGAGCATTTAAAAATGGTACACGAACCATGCCAAAGTTTAATTGTGGAAGAGAAAAGACCCTATCAATGTGACAAGTGCTTTAAACGATTCAAGTTTGCGGACTCGCTTGAGCGACATATTTACCGTCCGTACATGGTGAAAAATCATGTCTGCAAAACCTGTGGACTACTTTTCGTCACAAGACAAGACTTGCTTTCACACGAGCAAGAACAACATTCTGACACGGTATACGAGTGTCAAGATTGTTGTAAAACAATGACCAAAAAGACCGCCTATTTGAACCACATCAGTCGTCACAAATTAACTTTGGTCTGTTCCTTCTGCGGATTCATTACAAACAGTAAGATGAGCCTAAAACTACACACAGTGCAACATACAGGTGAAAAAAACTTTGCCTGTACCGTGTGCCAAAAGAAATTTAGAAGTCGAAATTTGGTTTCGATCCACATGAGAACGCATACAGGTTACAAGCCTTATGCTTGTAAATTTTGTCAGAAAAGCTATGCCCATTACTCGGATTGGAAGCGACACGAAGTTACGCACACTGGAGACTACCCCTTTGTCTGCGAGTACTGCGATAAGAAATTTGCACGTCGTGGACATNCACACTGGAGACTACCCCTTTGTCTGCGAGTACTGCGATAA
Protein Sequence: MCKSCISQLETAYSFKTQCIAADKKLKRLFTETTVAFEFISEPIATPEDSECMRIKQELKNVYEILNTIENEPCTDDNELKVLYQLQKSLKRAEEVVKLSCAKEKKQEIIPKIKTEVVPQDISDDDIDGRNELLKCCGCPGIFPSMKCLKNHAENMHKKEVAPLTRKEREKTVRQCKICFETFIGRQYIEQGHSKTDFINRLRIVNIACCGCNGVFDSTEALKTHASEHLDKKTVNPAMPFECEICFRRFSAKRGLSDHKVHSVRRKIELINNSNAMASKVENEESISFEQVEYLEVDEPFCDEMVTEIEVDTQRSGNRKTPLDCCGCEMSFFSSDQLKRHGIAKHKKPHVIEDPNVTVKQCIICFESFPMPNSNPPPGHSQSRLKLVSIPCCGCDKNFDSLMSLAKHSEEHIQNKLDEDQEKQFECGYCFKRFMNKRQQVEHRKNIKHIRSLLRKEDKPKYELEDTTEARCCGCKEVFAEIEELEEHLKMVHEPCQSLIVEEKRPYQCDKCFKRFKFADSLERHIYRPYMVKNHVCKTCGLLFVTRQDLLSHEQEQHSDTVYECQDCCKTMTKKTAYLNHISRHKLTLVCSFCGFITNSKMSLKLHTVQHTGEKNFACTVCQKKFRSRNLVSIHMRTHTGYKPYACKFCQKSYAHYSDWKRHEVTHTGDYPFVCEYCDKKFARRGHXHWRLPLCLRVLR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -