Basic Information

Insect: Mochlonyx cinctipes
Gene Symbol: -
Assembly: GCA_001014845.1
Location: JXPH01033496.1:5379-7167[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0085 0.36 11.6 1.4 3 23 220 241 219 241 0.96

2 10 4.2 1.8e+02 3.1 4.4 1 20 253 272 253 274 0.89

3 10 0.038 1.6 9.5 0.3 2 23 283 304 282 304 0.95

4 10 0.0001 0.0044 17.6 0.8 2 22 365 385 364 385 0.95

5 10 0.013 0.55 11.0 0.4 1 23 392 414 392 414 0.96

6 10 2.9e-06 0.00012 22.5 0.3 1 23 420 442 420 442 0.98

7 10 0.00019 0.0079 16.8 2.6 1 23 448 470 448 470 0.97

8 10 8.7e-05 0.0036 17.9 0.6 1 23 476 498 476 498 0.99

9 10 0.0011 0.045 14.4 0.8 1 23 504 526 504 526 0.98

10 10 6.5e-05 0.0027 18.2 1.9 1 23 532 554 532 554 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0085	0.36	11.6	1.4	3	23	220	241	219	241	0.96
2	10	4.2	1.8e+02	3.1	4.4	1	20	253	272	253	274	0.89
3	10	0.038	1.6	9.5	0.3	2	23	283	304	282	304	0.95
4	10	0.0001	0.0044	17.6	0.8	2	22	365	385	364	385	0.95
5	10	0.013	0.55	11.0	0.4	1	23	392	414	392	414	0.96
6	10	2.9e-06	0.00012	22.5	0.3	1	23	420	442	420	442	0.98
7	10	0.00019	0.0079	16.8	2.6	1	23	448	470	448	470	0.97
8	10	8.7e-05	0.0036	17.9	0.6	1	23	476	498	476	498	0.99
9	10	0.0011	0.045	14.4	0.8	1	23	504	526	504	526	0.98
10	10	6.5e-05	0.0027	18.2	1.9	1	23	532	554	532	554	0.98

Sequence Information

Coding Sequence: ATGGATATATGTCGTGTGTGCATGAGTAATGGGAGCTCAGTTATGGTACCCATTTTCTCAAGATTAGACAATATTTTCATTGCCAACATGTTAGCTGAATTATCATCGATTCAGATATTTGATGATGATGGACTACCTACTCTAATATGTAATTTGTGCATTTCCGAGATGAAAAGTGCTTCTACGTTCGTCAAAAAATGTAGGGAATCGGATATGAAGCTGAGAAAGATGTTCAAACAGGATCCAGAGGATCCTCAAATGATGTTTCCAATAGCAATGATTGGAATTCCTgatattgaaatcaaaaatgAGTTGAGTTCGGACGAACAAGCTCAGAACCATTCCGATTCCGATTCGTAttctgtaaaaattgaaaatgaaagcaGTGACACCGACACCGACGACGACATTCCATTGAGTACAAGGTACAATgttaagaagaaaaataatgttcGGAGAAAAGCTCCCAGAAAAAGGGGGAagacaattgaaaaaattccCCTCGAAGGAGATCCTTGCGAATGCAATGGAGATGTCACGCGAAAATGTTTAAACCCTAAATACAAAGCAAAAGACGGAACAATAAATTTCAGGGAAAGTGACCAACCAACAGACTCTGACATTCGATTTTCCGTCATCGATTTCACCGGCAAAATATGCTGTGGCTGCTCAAAAATCTTTGAAACACATGAGGAACTTCTTGAGCACGCCAAAACAGCGCACACCAATAAGCGGAATAGAAATTTCTCAAAAGAACatgaatgtaaaatttgttaCCGAAGATATACCTCATTCTGTAAGTTAAAATTCCACATGGATTTGTTCGCAACACTAAAACAACTGATTGTATGCTCGAAATGCGGCGTCAAATTCCCAGAAAAGGCGGGCGCAAAGAGACATGCTCAACACCATCCTAAATCTCCGGTACCTTTCGAACAAAAGCCTGTCCCAGAGGCAAAACCAAGAAAGATTTGTTGCGCCGTCTCCTGCCTTGCAACATTTGAAACTGAGGAACAACTTCTACAACATTGTCTCTCATCGCATACTTTGAATAAAGTCTCAGATCCGCTAGTTCTTAATTTGAAACCAGTCGAATGTGATCTCTGTTTCAAGCGGTTCAAGACTGAGGCCTCGTTAAAAAAGCACCAGAAAACAAATTATATGGACCTTGTGCACCAATGTGCGTTATGTGGTCTAAATTTCAAGAGCGCTAGCATTTTGATCAGCCACGAATTGAAGCATAAAGGAGAGAAGCCATTCCAATGCGACCTGTGTCCAAGGGCGTACTACACAAAAGGCAATTTAAAATCGCATATGGAAGTACacagtgaaataaaaaaacacatcTGCCAAGTTTGCGGAATGTCGTTCCATAAAAAAGGGACGTTAACTGTCCACTTATTGACGCATAAAGAAAAAATGGGCTTCAAATGCCCAATTTGCAGTAATGCTTATCGAGCTAAAAATAAGCTAGAAATGCATATGCGAACACACACTGGAGAGCGTccattcaaatgccaatattgCGGACAGGCGTTCGCCGAAGTTACTAACAAAAAACGGCACGAAATGAGTCATACAGGTTTCCGTCCCTATAGATGTAAGCTCTGTAACAAAGGATTCATGAGAAAACGGTATTTGCAGGAGCATGAGATAACACATTCTTTTAATAATTCTTAA
Protein Sequence: MDICRVCMSNGSSVMVPIFSRLDNIFIANMLAELSSIQIFDDDGLPTLICNLCISEMKSASTFVKKCRESDMKLRKMFKQDPEDPQMMFPIAMIGIPDIEIKNELSSDEQAQNHSDSDSYSVKIENESSDTDTDDDIPLSTRYNVKKKNNVRRKAPRKRGKTIEKIPLEGDPCECNGDVTRKCLNPKYKAKDGTINFRESDQPTDSDIRFSVIDFTGKICCGCSKIFETHEELLEHAKTAHTNKRNRNFSKEHECKICYRRYTSFCKLKFHMDLFATLKQLIVCSKCGVKFPEKAGAKRHAQHHPKSPVPFEQKPVPEAKPRKICCAVSCLATFETEEQLLQHCLSSHTLNKVSDPLVLNLKPVECDLCFKRFKTEASLKKHQKTNYMDLVHQCALCGLNFKSASILISHELKHKGEKPFQCDLCPRAYYTKGNLKSHMEVHSEIKKHICQVCGMSFHKKGTLTVHLLTHKEKMGFKCPICSNAYRAKNKLEMHMRTHTGERPFKCQYCGQAFAEVTNKKRHEMSHTGFRPYRCKLCNKGFMRKRYLQEHEITHSFNNS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -