Basic Information

Insect: Mochlonyx cinctipes
Gene Symbol: -
Assembly: GCA_001014845.1
Location: JXPH01042257.1:14261-16153[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.018 0.76 10.6 1.0 1 19 210 228 210 232 0.93

2 12 8 3.3e+02 2.2 1.7 1 23 238 263 238 263 0.79

3 12 1.2 49 4.9 0.2 2 21 268 287 267 290 0.78

4 12 0.0021 0.087 13.5 1.2 2 23 299 320 298 320 0.97

5 12 0.00022 0.0091 16.6 3.8 1 23 324 346 324 346 0.95

6 12 8.1e-05 0.0034 18.0 4.8 1 23 352 374 352 374 0.98

7 12 0.0099 0.41 11.4 2.4 1 23 380 402 380 403 0.95

8 12 2.9e-06 0.00012 22.5 5.9 1 23 432 454 432 454 0.99

9 12 2.7e-05 0.0011 19.5 2.2 1 23 458 480 458 480 0.98

10 12 1.5e-05 0.00061 20.3 2.6 1 23 486 508 486 508 0.95

11 12 8.1e-05 0.0033 18.0 5.2 1 23 514 536 514 537 0.95

12 12 0.005 0.21 12.3 1.3 1 23 543 565 543 565 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.018	0.76	10.6	1.0	1	19	210	228	210	232	0.93
2	12	8	3.3e+02	2.2	1.7	1	23	238	263	238	263	0.79
3	12	1.2	49	4.9	0.2	2	21	268	287	267	290	0.78
4	12	0.0021	0.087	13.5	1.2	2	23	299	320	298	320	0.97
5	12	0.00022	0.0091	16.6	3.8	1	23	324	346	324	346	0.95
6	12	8.1e-05	0.0034	18.0	4.8	1	23	352	374	352	374	0.98
7	12	0.0099	0.41	11.4	2.4	1	23	380	402	380	403	0.95
8	12	2.9e-06	0.00012	22.5	5.9	1	23	432	454	432	454	0.99
9	12	2.7e-05	0.0011	19.5	2.2	1	23	458	480	458	480	0.98
10	12	1.5e-05	0.00061	20.3	2.6	1	23	486	508	486	508	0.95
11	12	8.1e-05	0.0033	18.0	5.2	1	23	514	536	514	537	0.95
12	12	0.005	0.21	12.3	1.3	1	23	543	565	543	565	0.93

Sequence Information

Coding Sequence: ATGactgaaaattggaataaaatatgTAGATTGTGTTTAAAAGACAGTGACATACTTATTTCATTGTTTAAAAAGTTTAATGAAGTGTTTTTTCCCGATTTAATCAAGGATGCAATAggaattttgataactAATAAGGAAAAATTACCCTGCAATATTTGTTCCAGTTGCGTTTCGAAAGTTGAATTTATCTATGAGAACCGAAAACGGTTCCGGGAGAATGACGTAAAGCTGAGAAAACTGTTGGGCATCAACGAAAGTCAGAAAAGGGAATCGGATAGTAACGTTAAGACAGAATCAATTCACAAAATcgagaaaattgaaatatctgCAGGACATGAGTACGtggatgaagaagaagaagaatacgAAGAAGAAAGTTACGccgttgaaattttggaagatcCTGAAGATGAAAACTTCGGTGAAGGTCTGGAAACTCTATCATATGTCGATGTAAATGATGGAGTTGAAGAAGGAGAGGAAGAAGCAGATGCTGGAGAGGTAGAAGCGATAGCCGAAAGTGAAGGAGATGAGAAGCCAGCTGTTGTGGCTCGAAACAAACAGATTATCATTATTAAAGAGAAGGAAAGTGTTAGAAGTGAAAATAAACCGAGGCGTAATGAACATAAATGTTACCTTTGCGATGAAGTCTTTACTTCGAGTATAAAATTGTCCGAGCATTTTCCTGTCCATATAGATAAAATTCCTTACAGTTGTGAAGAGTGTGTAATGAATCCAGTGACGATTAAAACACTGGCCCTCCTCAACCAGCATCTGAAAATGCACCAACAGCCAGTAAAATGTAATTATTGTGACAATCGTTATAGCACCGTGAATGCGAGACGAGGCCACGAACAAGCAGCCCATCTGAATGTTGAAAAACAGGCGATGGTTTGTGAGATTTGCGAGAAAGATTGCCCTTCTCAACGAAGCTATAAAGAACATCAAAAGATTCATAGGCAGGAACATCAATGTGAGACTTGCCACAAGAGTTTCATCTCAAGGTCAGTCTTGAAACGCCACGAAATCCTTCATACCGGTTTAAAACCATTCGAGTGTACGCTATGCGATCAAAAATTCAATCACGAATCCAACTACAAGACACATTTAAAAAGACATACCGGAGAAAAGGCGCACTCCTGTACCATGTGTCCAGCCACCTTCCTTGTCAGCAACTATTTGCGGGATCATATGCGCGTCCATCACGGTGAAAAAGTCTTTATTCCAAAACGGAATCTGAGAGGCCTTTACGAGTGCACTGTGATCGATTCCAAATTAAGTAAACGAGAATATACCTGTAAGCAGTGTGGAAAAGTTTTCTCAAGCAGCACTCACATTACTCACCATTTGAGAACTCACGATAAGATGCATCAGTGCGCCCATTGTGGGCGCACTTTCAAGGACGCCCGTGCCCTCTCAGACCATGAAAATACACACACCGGAAAGAAGCCCCATGCCTGTAAGACGTGTGGAAAACGGTTTGCCAACTCATCGAATCTCTACCAACATAACAAGATTCACACTGGCGTTAAAGAGCACAAATGTGACGTTTGCTCTAAATTATTCACGTACCGTGAAAATCTAAAAACCCACATAAGGCTCCACCACAGTTCGGAACGTCGGTACGAATGCATAATTTGCCATGAGAAGTTCAATGATAACGTTTCGCTAAAAAAACACAAAGATTGGCATTCAGAAATTCCCGTTGGAAATGTGGAAAATACTGTAGAAATTATAGAACAAGGGGAAGAAGTAATGGAGGAGGAGATTTTAGGTTAG
Protein Sequence: MTENWNKICRLCLKDSDILISLFKKFNEVFFPDLIKDAIGILITNKEKLPCNICSSCVSKVEFIYENRKRFRENDVKLRKLLGINESQKRESDSNVKTESIHKIEKIEISAGHEYVDEEEEEYEEESYAVEILEDPEDENFGEGLETLSYVDVNDGVEEGEEEADAGEVEAIAESEGDEKPAVVARNKQIIIIKEKESVRSENKPRRNEHKCYLCDEVFTSSIKLSEHFPVHIDKIPYSCEECVMNPVTIKTLALLNQHLKMHQQPVKCNYCDNRYSTVNARRGHEQAAHLNVEKQAMVCEICEKDCPSQRSYKEHQKIHRQEHQCETCHKSFISRSVLKRHEILHTGLKPFECTLCDQKFNHESNYKTHLKRHTGEKAHSCTMCPATFLVSNYLRDHMRVHHGEKVFIPKRNLRGLYECTVIDSKLSKREYTCKQCGKVFSSSTHITHHLRTHDKMHQCAHCGRTFKDARALSDHENTHTGKKPHACKTCGKRFANSSNLYQHNKIHTGVKEHKCDVCSKLFTYRENLKTHIRLHHSSERRYECIICHEKFNDNVSLKKHKDWHSEIPVGNVENTVEIIEQGEEVMEEEILG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -