Basic Information

Insect: Mochlonyx cinctipes
Gene Symbol: -
Assembly: GCA_001014845.1
Location: JXPH01040691.1:2134-5629[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0079 0.33 11.7 3.4 1 23 187 209 187 209 0.98

2 12 0.019 0.78 10.5 2.0 2 23 217 238 216 238 0.96

3 12 1 43 5.0 2.7 1 23 355 378 355 378 0.94

4 12 0.027 1.1 10.0 2.3 1 23 390 412 390 412 0.97

5 12 0.0099 0.41 11.4 0.2 5 23 464 483 459 483 0.89

6 12 2.5e-05 0.0011 19.5 0.3 1 21 499 519 499 520 0.96

7 12 6.5e-06 0.00027 21.4 0.6 1 23 527 549 527 549 0.99

8 12 0.061 2.5 8.9 6.6 1 23 555 579 555 579 0.98

9 12 4.2e-05 0.0017 18.9 0.1 1 23 585 607 585 607 0.96

10 12 4.9e-06 0.00021 21.8 1.5 1 23 613 635 613 635 0.99

11 12 0.00042 0.017 15.7 1.8 1 23 641 663 641 663 0.97

12 12 0.00068 0.028 15.0 1.9 1 23 669 691 669 691 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0079	0.33	11.7	3.4	1	23	187	209	187	209	0.98
2	12	0.019	0.78	10.5	2.0	2	23	217	238	216	238	0.96
3	12	1	43	5.0	2.7	1	23	355	378	355	378	0.94
4	12	0.027	1.1	10.0	2.3	1	23	390	412	390	412	0.97
5	12	0.0099	0.41	11.4	0.2	5	23	464	483	459	483	0.89
6	12	2.5e-05	0.0011	19.5	0.3	1	21	499	519	499	520	0.96
7	12	6.5e-06	0.00027	21.4	0.6	1	23	527	549	527	549	0.99
8	12	0.061	2.5	8.9	6.6	1	23	555	579	555	579	0.98
9	12	4.2e-05	0.0017	18.9	0.1	1	23	585	607	585	607	0.96
10	12	4.9e-06	0.00021	21.8	1.5	1	23	613	635	613	635	0.99
11	12	0.00042	0.017	15.7	1.8	1	23	641	663	641	663	0.97
12	12	0.00068	0.028	15.0	1.9	1	23	669	691	669	691	0.99

Sequence Information

Coding Sequence: ATGGCTACATGCAGAATATGTATGACTAACGAGAGTTTGAGCCTTGTTCCGATATTCTCCAAAATTGAGgatgtttttattgcaaacatGATTGCTGATTGCGCTTCGATTCAGatttttgaagatGACGGTTTGCCGACCCAAGTGTGCAGTGTTTGTGTCGTTGAACTGAAGAACGCTTCGGTTTTCATACGAAAATGTCGAGATTCCGacagaaaattgaagaaaattttcaaggtGGATTCGGCGGgggaAGACGAAACAGAGTATCCAATAAATTTGGTTGAGCTTCCGGcgcttgaaataaaaaatgaaattgatcaAGATTACAATGAGTACAATATCACAGAATACGAAAATTCACTTTTACTTCGTGCTGGTGACGAAGAAGAGccacaagaagaagaagaagaagaagaagaaaaactagaTTCTGATAATGAGTCTGAATCTTCCGAATCTTCAGAGGAACcggtaaaaaagaaaagcatgcCCAATCTTTTGAAACATGGAAAAAAGGTGCATAGCAAGAAGCGGAACATAAATTACGCAAAGAAACATCAATGCAATATTTGCTATAGACGCTACACAGATGAAAAAATGCTCGTATATCACAAGAGACTGCATTCAGGACTGAGACAATTGATTGAATGCTCCAAATGTAAAACGAGATTTTCGGAAAAGAAGCTGGCGAAAAGACATGCGAAAAATCATCCAACGAACTCGAATCAAATTCGTGGAAACTCGTCAAAAGAAGATGAACACATTGAATTCAGTGGTATTAAAATGGAACAAGATGATCCTCTCGAAGGACACAGCGGTGTTAAACAAGAGATTGAAGAAACTATGGATGAATCGTACAATGAGGAAGATGACGAGGAACAGGAGGATGAAAAGGTTGCAGACAGCGACGATTCTGAATATGAAAGGGAGAAAATAAGGCTCAAGAAGATGAGAAAGAATATGCTATCGTACCAGGTTAAAAGCGACAagatatttttaaaggaaaCAGACCAACCTGATGACCCGAGTTACAGACTCATTGTTGTTGATATACAAGGTCACATTTGTTGTGGCTGTATGAAGACATTTGAAACTAAAGAGGAAGTGCTGGAGCATGGTAAACGAAATCACAATGCAAAACGATATGTAAATTTGGAAAAGAGGCACGAGTGCAATATTTGCTTCAGACGTTATACCAACGATTGGATGCTGGAATATCACACGAAACTACATTCTACCTTAACGCAGCTGATTGAATGCACAAAATGTAATTCCAGATTCTCGTGTCGCATTTTAGCGGGTAGACATGCTAAAAAACATCCTCTTGGGCGAGGCGCGATTAAAaaaccaaaagattttattatgaGAACAGTTTGTTGCGCCAAAGCGTGCGGTAAAGCTTTTGGAAATGAATCCGAACTTCTGCAACATTCAAGGGTCGAGCACAGTTACAACAAAGTTTGCTACACTGACACGGCACCACAAAAACCTTTTGAGTGTGACATTTGTTACAAAAGATTTGCACATAGTGAGTCTTTGGAAGCGCATCAGCGTTGGCCGTATAAAGAGAAGCATTACCAGTGTTCTCTTTGCGGTCTCAATTTTAAACAGTCAGAAGCATTGAAAATTCACGAGAGAAAGCATGGAGGAGAAAAGCAATTTAAATGTGATTTTCCACAATGTCCAAAGGCTTTCCATTGTAAATCACATTTGAAAACTCATTTACAAGTTCACACTCAAAGTAAGCCTTTTATGTGCTCAGAATGTGGCGTTTCTTTCGCATCGAAAGGCAGTCTCCAATCTCATTCACTCGTACACAAGGACGAGTACCATTTCAAGTGCACGTACTGTCCACGAGAGTTTAAAGCTAAGCAAAAGCTCATTATACATATGAGAACACATACTGGCGAGAAGCCTCATAAATGCAAGTATTGCGATCAGGGGTTCGCTGACCCCACAAACAAAATGCGACACGAAATGAGTCATACAGGATATAAACCGTACAAATGTCGATTCTGCGAAAGAGGATTCGTTAGGAAACGATTTCTGGCCGATCACGAGCGTACTCACGGAGTTATTCCCAATTAA
Protein Sequence: MATCRICMTNESLSLVPIFSKIEDVFIANMIADCASIQIFEDDGLPTQVCSVCVVELKNASVFIRKCRDSDRKLKKIFKVDSAGEDETEYPINLVELPALEIKNEIDQDYNEYNITEYENSLLLRAGDEEEPQEEEEEEEEKLDSDNESESSESSEEPVKKKSMPNLLKHGKKVHSKKRNINYAKKHQCNICYRRYTDEKMLVYHKRLHSGLRQLIECSKCKTRFSEKKLAKRHAKNHPTNSNQIRGNSSKEDEHIEFSGIKMEQDDPLEGHSGVKQEIEETMDESYNEEDDEEQEDEKVADSDDSEYEREKIRLKKMRKNMLSYQVKSDKIFLKETDQPDDPSYRLIVVDIQGHICCGCMKTFETKEEVLEHGKRNHNAKRYVNLEKRHECNICFRRYTNDWMLEYHTKLHSTLTQLIECTKCNSRFSCRILAGRHAKKHPLGRGAIKKPKDFIMRTVCCAKACGKAFGNESELLQHSRVEHSYNKVCYTDTAPQKPFECDICYKRFAHSESLEAHQRWPYKEKHYQCSLCGLNFKQSEALKIHERKHGGEKQFKCDFPQCPKAFHCKSHLKTHLQVHTQSKPFMCSECGVSFASKGSLQSHSLVHKDEYHFKCTYCPREFKAKQKLIIHMRTHTGEKPHKCKYCDQGFADPTNKMRHEMSHTGYKPYKCRFCERGFVRKRFLADHERTHGVIPN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -