Basic Information

Insect: Mochlonyx cinctipes
Gene Symbol: -
Assembly: GCA_001014845.1
Location: JXPH01014768.1:883-2830[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 1.3 55 4.7 1.0 3 23 195 216 193 216 0.95

2 12 0.064 2.7 8.8 0.2 1 20 230 249 230 251 0.92

3 12 4 1.7e+02 3.2 3.2 1 23 259 281 259 281 0.87

4 12 0.022 0.9 10.3 1.1 6 23 309 327 304 327 0.90

5 12 0.00019 0.008 16.8 1.3 2 21 344 363 343 364 0.93

6 12 8.8e-05 0.0037 17.8 2.3 1 23 371 393 371 393 0.98

7 12 2.7e-05 0.0011 19.4 0.7 1 23 399 421 399 421 0.98

8 12 0.00024 0.0099 16.5 0.5 2 23 428 449 427 449 0.93

9 12 4.6e-05 0.0019 18.7 1.6 1 23 455 477 455 477 0.99

10 12 0.00054 0.022 15.4 3.3 1 23 483 505 483 505 0.98

11 12 0.00083 0.034 14.8 2.8 1 23 511 533 511 533 0.95

12 12 2.5e-06 0.00011 22.7 1.4 1 23 539 561 539 561 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	1.3	55	4.7	1.0	3	23	195	216	193	216	0.95
2	12	0.064	2.7	8.8	0.2	1	20	230	249	230	251	0.92
3	12	4	1.7e+02	3.2	3.2	1	23	259	281	259	281	0.87
4	12	0.022	0.9	10.3	1.1	6	23	309	327	304	327	0.90
5	12	0.00019	0.008	16.8	1.3	2	21	344	363	343	364	0.93
6	12	8.8e-05	0.0037	17.8	2.3	1	23	371	393	371	393	0.98
7	12	2.7e-05	0.0011	19.4	0.7	1	23	399	421	399	421	0.98
8	12	0.00024	0.0099	16.5	0.5	2	23	428	449	427	449	0.93
9	12	4.6e-05	0.0019	18.7	1.6	1	23	455	477	455	477	0.99
10	12	0.00054	0.022	15.4	3.3	1	23	483	505	483	505	0.98
11	12	0.00083	0.034	14.8	2.8	1	23	511	533	511	533	0.95
12	12	2.5e-06	0.00011	22.7	1.4	1	23	539	561	539	561	0.98

Sequence Information

Coding Sequence: ATGAATATCTGTAGAGTTTGCATGGTTAATGGTTCTTCGGACCTGCTTCCTATTTTCTCAGAAATGGAAGATACATTTATTGCGAACATCATCGTAGATTGTGCATCCGTGGAAATATTAGAAGACGATGGACTTCCTACAGTAGTTTGTCGAACATGTATCGATGAACTAAAAAGTGCTTCTGCTTTTGTCACAAAATGTCGGGAATCAGATCGGAAATTGAGGAAAATGTTCAAGACTGAAGTCGGTATTGTTCCAGTCAATTTTCCACTAGTAATCCTTGAAGAACTGCCTGAACAGTCGTCGAAAACTGAGCCCGAAGACGAACCAATACATATTattaagaaagaaaatataGATGATTCTGATGATAATAATGAGGATGAGGAAGAAGAAGATTTTACTGATGATAATGATCCAGCTTTTAAACTTTCTGACGATTCATCAGATTCAGTTCAAAAGCGTACTAGAGCTTCGAGATCGAAAAAGTACacgaaaaaagctaaaactgaaacaGAAAATGATGATGATCTCGGAGAACTATCGATACCCGTCAATGTAATCGATATCAACGGTATTGCTTGCTGTGGATGTCTGCAAATCTTTGATACGGACGACCAAATGAAAGAACACTCAAAAACAACTCATTCCAAGAAGAGAAGAACTCATCAAAATATGAACAAAAACTTCGCTTGTGTAGTCTGCTACAAGAGATTTGACTCTGAACGACTACTAAATTTGCACACTGATAAAATGAAGGAGATTAAGAAATTATACGAATGCTCGCAATGCAATAATCGCttcaaagaaaagaaattcGCCAAATTCCACATTAAAAATCATCCTGGTCCTAGAACAAAAAGATCATTTGTTAAAAATGTGGAGAAAAATGCATCATTTGGAAAATTATGTTGCGCTCAGGCTTGCGGAAAGGCGTTTGAAACTGAAGAACTTCTCATCAAACACGCTCACACTACTCACGAGATCAATAAAATTGTTGATGATGAGGTGAAAAAGACAAAACCTATTGAATGTCACATCTGTTTCAAAAGATTTGCCAATAAACAATCATTAACAACGCATCAGAGCCGCAAATATAAAGATGATAATCATCAATGCACACTGTGTGGTTTGAAATTCAGGAGTAACAGCGTTCTTTTGACACATGAGCGGACACATACTGGGGACCGCCCATTTGTATGCGACAAATGTCCAAAACGATTTTACAGCAAAGAAATCTTAAAGGCTCACATGCTGACCCATTCAGAAGTTAAACCTTGGGTTTGCTCTGACTGCGGCTGGGCTTTTGTTCGTAAAAAGAACTGGCAGGTACATTGCCTCACACATACTGATGAATATCCATTCAAATGTAATATGTGTCCAAGTAAATTCAAGTCGAAGCCACCTCTACAATATCATATGCGTACGCATACCGGCGAACGTCCTTACAAGTGTCGTTATTGCGAGAAAGCATTCGCAGACCACACGAACCGCCAACGCCATGAAATGAGTCACACTGGAATTAAACCGTACAAATGTACCTACTGCGATAAAACGTTCATCCGAAAGCGATTCCAAGTCGAACATGAAAGTACTCACACTGGAATCCGACCCTATAAATGTGATTTATGTCCCAGAATGTTCAGCCAGAAAATGTCGCTGAAAAAACACTTGGAATCTCACCCCGAATACCGGCAGGCAATGATGATGGCTCAAATGGCTCAGCAGCCGGAGCAGAGTCAACAGAGTAATTTTAATTCCGCAGAATCTACTCCGCAACACACTATAAACAGTCCGCAGTCGCAAGAATCTGTCGTCaatatttattaa
Protein Sequence: MNICRVCMVNGSSDLLPIFSEMEDTFIANIIVDCASVEILEDDGLPTVVCRTCIDELKSASAFVTKCRESDRKLRKMFKTEVGIVPVNFPLVILEELPEQSSKTEPEDEPIHIIKKENIDDSDDNNEDEEEEDFTDDNDPAFKLSDDSSDSVQKRTRASRSKKYTKKAKTETENDDDLGELSIPVNVIDINGIACCGCLQIFDTDDQMKEHSKTTHSKKRRTHQNMNKNFACVVCYKRFDSERLLNLHTDKMKEIKKLYECSQCNNRFKEKKFAKFHIKNHPGPRTKRSFVKNVEKNASFGKLCCAQACGKAFETEELLIKHAHTTHEINKIVDDEVKKTKPIECHICFKRFANKQSLTTHQSRKYKDDNHQCTLCGLKFRSNSVLLTHERTHTGDRPFVCDKCPKRFYSKEILKAHMLTHSEVKPWVCSDCGWAFVRKKNWQVHCLTHTDEYPFKCNMCPSKFKSKPPLQYHMRTHTGERPYKCRYCEKAFADHTNRQRHEMSHTGIKPYKCTYCDKTFIRKRFQVEHESTHTGIRPYKCDLCPRMFSQKMSLKKHLESHPEYRQAMMMAQMAQQPEQSQQSNFNSAESTPQHTINSPQSQESVVNIY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -