Basic Information

Insect: Mochlonyx cinctipes
Gene Symbol: prg
Assembly: GCA_001014845.1
Location: JXPH01093743.1:2171-4018[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 1.2 51 4.8 1.3 1 13 153 165 153 176 0.83

2 10 0.18 7.6 7.4 0.8 1 23 182 205 182 206 0.96

3 10 0.0038 0.16 12.7 1.5 1 23 211 233 211 233 0.96

4 10 2.4e-08 1e-06 29.0 1.4 1 23 239 261 239 261 0.98

5 10 3.8e-06 0.00016 22.1 0.4 3 23 269 289 268 289 0.99

6 10 0.00069 0.028 15.0 1.3 1 21 296 316 296 317 0.95

7 10 0.00016 0.0067 17.0 2.5 1 23 405 427 405 427 0.93

8 10 1.5e-05 0.00061 20.3 0.3 1 23 433 456 433 456 0.94

9 10 0.00015 0.0062 17.1 2.7 1 23 462 484 462 484 0.97

10 10 0.00023 0.0098 16.5 0.2 2 23 490 511 489 511 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	1.2	51	4.8	1.3	1	13	153	165	153	176	0.83
2	10	0.18	7.6	7.4	0.8	1	23	182	205	182	206	0.96
3	10	0.0038	0.16	12.7	1.5	1	23	211	233	211	233	0.96
4	10	2.4e-08	1e-06	29.0	1.4	1	23	239	261	239	261	0.98
5	10	3.8e-06	0.00016	22.1	0.4	3	23	269	289	268	289	0.99
6	10	0.00069	0.028	15.0	1.3	1	21	296	316	296	317	0.95
7	10	0.00016	0.0067	17.0	2.5	1	23	405	427	405	427	0.93
8	10	1.5e-05	0.00061	20.3	0.3	1	23	433	456	433	456	0.94
9	10	0.00015	0.0062	17.1	2.7	1	23	462	484	462	484	0.97
10	10	0.00023	0.0098	16.5	0.2	2	23	490	511	489	511	0.97

Sequence Information

Coding Sequence: atgtgcAGACTATGTTTGGATGAAGGTAGGCCACTGATTAACGTTTTTGGAGAAGTGGCAAATGGAGATGGAAATGAGCCACTGCATTCTCgtattttgcacttttttgaaGTTCAGATAGAGGAATCGGACAATTTACCAAAAGAAATCTGCCAACAATGTCTTCTAAACATCGATAACTACACAGAGTTTAGGGAAATTTGTATTAAAAACGATCTGAAACTACGAAATTTAGTCTCATTAGCTTTAAGTGAAAATGGGGCGACTGAGGAGCCTCATGGAATGGATGAAAGTATCGATACGATTGTGGTTGATCCAACAAAAGATTACGAAAGCTCAGAAAATGAGTTTGGATCCGAAGCAGAGAACGAAGTCCCTGCTCCAGAAGAGGAACACGATGAAACGATTGAAGCTTCAGAGGAAAAGGTAGCTGAAAGTGTAGAAAAGAAGCATGGCTTCATGTGCAAATATTGTGATTTAGCGTTCGCTTTTCACGAGTCTTGTTTAGGGCATGAATTGCAAGATCACGATCAAGAAATGCCCTACGTGTGCAATTTTTGCTCTTACAAAAGTGGTGATAGACTGAATGTTATAACTCATATTCGGGAAGTCCATCACGTTGAGAGACCTTACATTTGTCTGCAATGTAGTAAAGGGTTCTTGCGTCGTTCGGACCTGAAAAAGCACACCTTTGTGCACACCGgtATTCGTCCATACTCCTGTGAGATATGTGAGAAAACTTTCTCTAGAAACACAAATCTCACAAAACATCTGAGAATACATTCTGGAATTAAGCCCCATGGATGTAATCAGTGTTCAAAGGCGTTCACGAACAAAGCAGACCTCATTCGCCACCAAAACGTTCATTTTGAAAGTGGGAAGCAGTATTATTGCTCGAAATGTAACCACGCTTTCAATCGTAAAGATAGACTGATAAATCATGAGAGAATTTGCATCTTCAAATACCCTCAAAACAATTCTAATGACCTAGATGCTGAAAATATGGTGATATCTTTAGATCCATTCGCAGAAATGGATCAAATTCTTGCCGATGATGATGGTCCTCCTCCTCCCATCATCCAACCAACAATCAGCATTTTCCCGGGTGTTGACTATCTCTACAATGTCGAGCCACCGAGCAGAGATCATATTACAGGAGATGTGACTTCTGTTGAGAGTAACGAGAATATTGATGAAGACAAATTAAGAACTTTCGCATGTGATAAATGCCCAAAAAAGTTTACGACAAAAACCTTCCTTCAAAACCATTATTTTGCACATTTAGACATCCGAAATTTCGTTTGCCTGATTTGTAATAAAGCGTTCATTCGGAAAAGGGAGCTGGAAAGACACACCGTCTCGATTCATTTGAAAGAAAAACCATTTGCATGTAAGACTTGCCAGAAAAAGTTCTCCCGTAAAGATAAAGCCGTAAAGCACGAAAGAACACATGAATCAAAATTGATTACTTGCGGGAAATGTAACGCTGTGTTCTCGAAGAAAGACTCTTTGGACATTCATTTGAAAGTTCATTGCGTTCCGAATCAGGAGCAGATTTTAATCATGATCGATCAACCGAAAGATGATGATATTTTAGATCAGATTTTGCAATATAATGTTGAAAGCGTGGTTGATGCCGCAAgtgttattttataa
Protein Sequence: MCRLCLDEGRPLINVFGEVANGDGNEPLHSRILHFFEVQIEESDNLPKEICQQCLLNIDNYTEFREICIKNDLKLRNLVSLALSENGATEEPHGMDESIDTIVVDPTKDYESSENEFGSEAENEVPAPEEEHDETIEASEEKVAESVEKKHGFMCKYCDLAFAFHESCLGHELQDHDQEMPYVCNFCSYKSGDRLNVITHIREVHHVERPYICLQCSKGFLRRSDLKKHTFVHTGIRPYSCEICEKTFSRNTNLTKHLRIHSGIKPHGCNQCSKAFTNKADLIRHQNVHFESGKQYYCSKCNHAFNRKDRLINHERICIFKYPQNNSNDLDAENMVISLDPFAEMDQILADDDGPPPPIIQPTISIFPGVDYLYNVEPPSRDHITGDVTSVESNENIDEDKLRTFACDKCPKKFTTKTFLQNHYFAHLDIRNFVCLICNKAFIRKRELERHTVSIHLKEKPFACKTCQKKFSRKDKAVKHERTHESKLITCGKCNAVFSKKDSLDIHLKVHCVPNQEQILIMIDQPKDDDILDQILQYNVESVVDAASVIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -