Basic Information

Insect: Mochlonyx cinctipes
Gene Symbol: -
Assembly: GCA_001014845.1
Location: JXPH01013611.1:1-2690[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0011 0.046 14.4 2.0 1 23 309 331 309 331 0.94

2 9 3.8e-06 0.00016 22.1 2.6 1 23 337 359 337 359 0.99

3 9 7.9e-06 0.00033 21.1 3.1 1 23 368 390 368 390 0.98

4 9 0.08 3.3 8.5 1.3 5 23 400 418 396 418 0.92

5 9 0.00047 0.02 15.5 0.7 2 23 464 486 463 486 0.95

6 9 0.00044 0.018 15.6 4.5 1 23 490 512 490 512 0.99

7 9 2.9e-05 0.0012 19.3 0.9 2 23 519 540 518 540 0.97

8 9 2.2e-07 9.2e-06 26.0 1.8 3 23 553 573 552 573 0.98

9 9 4.8e-05 0.002 18.7 0.3 3 23 581 601 579 601 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0011	0.046	14.4	2.0	1	23	309	331	309	331	0.94
2	9	3.8e-06	0.00016	22.1	2.6	1	23	337	359	337	359	0.99
3	9	7.9e-06	0.00033	21.1	3.1	1	23	368	390	368	390	0.98
4	9	0.08	3.3	8.5	1.3	5	23	400	418	396	418	0.92
5	9	0.00047	0.02	15.5	0.7	2	23	464	486	463	486	0.95
6	9	0.00044	0.018	15.6	4.5	1	23	490	512	490	512	0.99
7	9	2.9e-05	0.0012	19.3	0.9	2	23	519	540	518	540	0.97
8	9	2.2e-07	9.2e-06	26.0	1.8	3	23	553	573	552	573	0.98
9	9	4.8e-05	0.002	18.7	0.3	3	23	581	601	579	601	0.99

Sequence Information

Coding Sequence: tttccaATCGataatgatttaaaaatagaatggataaaatcGCTACAGTTCAAAAACTATCAAAAGGTCGATGAGGTCGCGAATAATGCTAAAATTTGCTCCTGCCATTTTGTTGAGAGTGATTTCGGAAAGCATGCGACGTACGGTTACAAATATCTTTTGCCAACAGCAATTCCTTCGATATTTCCCAACATAAAGCAGGATGAAGGACTGAATAATTATTACGATGAATTTGTAGAAGAAACTGAAGATGTGACGGAAACAGGAGAATCAAATTTGGCTGAACAGTCGATCGGattggatgatgatgatgttgtaaCAGAGTTTATTCAATTCAATCACGATAAGAATAGAGGAAATGTCGATGAAACCAGTGGAAACGTTATCAATATCCTAGATGCAAACTTCTCGTCAATGGGACTTCGTTTTGTGGATGGAGAACTTGTCTGTCTTCAGTCTATTCCTACAGAGAATGAAAGTGAAAGTAACAACAATAATAACGAGCAGTTTGAAGAAGATAATGATAATGTCGAAGAAAAGGTTTACGTGGAGGATGAAGAATATGAAAATGAACAGGATTATGAAGAAGACagagaagaaattaaaaattttgaaatagtttttgaTGGAGAAGAAAACGAGCAAGCAATCCCTATTCAATACGTTGAAGAAATTATTGAGGAAGGCGAAGaagttgaagaagaagaagaagaagtggaagaagtTAAAAATGTCCTAATTGACCCGATCGGTAGTGTAAATGATGGACATGAAACAATAAGCGTTTGCGTCTTGAATAGAGAGAATAAGGAGGAAGAGAATTATATTGTGGAAATAATGAACGATAACGAAAGTGAATGTGGAACTGTAGATGATAACATTTCAATCATTTCAAGTTCTATGCtagagaaaaaggaaaatCGATTTATCTGCTCATTTTGCAAAaaaggattttcatttttgagtgCTTTAAAAAAACATTCGTTTGTCCACACAAAAGAAAAACCATTTCAATGTGAACATTGCACAAGAGGCTTCTCCCAAAAGATCAATCTCGACATCCACATGCGAAGGCACACTGGAATTGTCCCGGAGAAGAGGTTCGAATGCGTGTATTGCGGTAAAAAATGCGGCAGGCAGAGTGAACTGAAAACGCACATAAAGAAACATATTAAAGAGCGGCCGCACTTGTGTATAATTTGCGATGAGAGATTCAAGGATTTAACGACCTATTATGCACATTTGAAGCAGCATAAAGCGAAAGATGAGGTCACAAAAGAAGCTTACATTGAAATGATTGCACAAAATGAAAATGCTGAAATTATTATGGGGAACGGGATCGGATTAAATGAACCCAGTTCAATTCTAGCTGTTGGAGAAGACGGACTGATTTGTAATGTTTGTGGAAAAACAGTGAAAGGCGAAAAGGCATTGAAAAGGCACAAGAAAAAacagcatcccaaaatctacACTTGCCACTACTGCTACAAACAGTTTTTGTATCCAAGCACTTTAGAGAAACATCTCAGGAGTCACACGCAGGAAAAGCCATGGGAGTGCGAGCATTGCGATGGAAAATTCTCCCAAAAAGTGAATTTAGAAATACATCTGAAACGACATGGAATTTTCGTAGGAAAGCACCAACTTTCAGAGATTTGTAGTATTTGTAATAAACAGTTTACGAGAAAATCACAATTGGAAAATCATTTGAGGACGCACAGTGGAGAACGGCCATTTTGGTGTCATTTATGTGATAGAACGTATATAGTTGCTAGCGCCCTCGCTGCCCACATGAAGACGCATAGAGTGCGCGAAATTGAGGAATTTCCTTCTACTTATTGGACAGAATCTTTCTCTACAGAAGGATTGTGCAGCGAGCATGAGGAGGGTGAACAATTGGAAGATATTGAAGAACAGTTgtag
Protein Sequence: FPIDNDLKIEWIKSLQFKNYQKVDEVANNAKICSCHFVESDFGKHATYGYKYLLPTAIPSIFPNIKQDEGLNNYYDEFVEETEDVTETGESNLAEQSIGLDDDDVVTEFIQFNHDKNRGNVDETSGNVINILDANFSSMGLRFVDGELVCLQSIPTENESESNNNNNEQFEEDNDNVEEKVYVEDEEYENEQDYEEDREEIKNFEIVFDGEENEQAIPIQYVEEIIEEGEEVEEEEEEVEEVKNVLIDPIGSVNDGHETISVCVLNRENKEEENYIVEIMNDNESECGTVDDNISIISSSMLEKKENRFICSFCKKGFSFLSALKKHSFVHTKEKPFQCEHCTRGFSQKINLDIHMRRHTGIVPEKRFECVYCGKKCGRQSELKTHIKKHIKERPHLCIICDERFKDLTTYYAHLKQHKAKDEVTKEAYIEMIAQNENAEIIMGNGIGLNEPSSILAVGEDGLICNVCGKTVKGEKALKRHKKKQHPKIYTCHYCYKQFLYPSTLEKHLRSHTQEKPWECEHCDGKFSQKVNLEIHLKRHGIFVGKHQLSEICSICNKQFTRKSQLENHLRTHSGERPFWCHLCDRTYIVASALAAHMKTHRVREIEEFPSTYWTESFSTEGLCSEHEEGEQLEDIEEQL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -