Basic Information

Insect: Mochlonyx cinctipes
Gene Symbol: -
Assembly: GCA_001014845.1
Location: JXPH01080126.1:415-2052[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00064 0.027 15.1 4.7 1 23 176 198 176 198 0.98

2 10 0.00032 0.013 16.1 0.1 1 23 204 226 204 226 0.96

3 10 6.4e-07 2.7e-05 24.6 2.0 1 23 232 254 232 254 0.99

4 10 0.00035 0.015 15.9 2.1 1 23 260 282 260 282 0.96

5 10 5.1e-05 0.0021 18.6 2.0 1 23 291 313 291 313 0.98

6 10 0.00013 0.0054 17.3 4.2 1 23 319 341 319 341 0.98

7 10 8.4e-05 0.0035 17.9 2.4 1 23 347 369 347 369 0.97

8 10 3.2e-05 0.0013 19.2 1.0 2 23 376 397 375 397 0.96

9 10 0.0007 0.029 15.0 0.1 1 23 403 425 403 425 0.96

10 10 0.00083 0.034 14.8 1.4 2 23 433 455 432 455 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00064	0.027	15.1	4.7	1	23	176	198	176	198	0.98
2	10	0.00032	0.013	16.1	0.1	1	23	204	226	204	226	0.96
3	10	6.4e-07	2.7e-05	24.6	2.0	1	23	232	254	232	254	0.99
4	10	0.00035	0.015	15.9	2.1	1	23	260	282	260	282	0.96
5	10	5.1e-05	0.0021	18.6	2.0	1	23	291	313	291	313	0.98
6	10	0.00013	0.0054	17.3	4.2	1	23	319	341	319	341	0.98
7	10	8.4e-05	0.0035	17.9	2.4	1	23	347	369	347	369	0.97
8	10	3.2e-05	0.0013	19.2	1.0	2	23	376	397	375	397	0.96
9	10	0.0007	0.029	15.0	0.1	1	23	403	425	403	425	0.96
10	10	0.00083	0.034	14.8	1.4	2	23	433	455	432	455	0.95

Sequence Information

Coding Sequence: ATGTTTATGGTACAATATCATTCTGGAAACGAGCCCCCTCAATATTTTGCAGAAAATAGCGAGAATTACTGCAGATTATGCATGTCTAATCAAAATGGGTTGCAATCAATATTTCTGGCCGAAGGAAAGATTAAACAAAAGCTTGTGGAGAAGATTTTTGAATGCACCACGGTTGAAATAACATCAGAGAATGATTATCCTTCATCCGTTTGCCATGCATGTATTTTAACTTTGGACGAGTTCCATCAATATCGAAATAATTGTATTCAGAATGATGCCATAATTCGAGCAAACAGAACTCGTTTACAGCAACAGCAGCCAAAAGCAGTGTCTCGTACAGCTAGTGTTGATTCTGAGATTAATGTCGCTGAAATTCCgacagaatttttcagtagtCGTAGCTCGACGCCTTTTACCGTCGCTTCTaagcttcaaatcaaaatgGAACAGAGCGACGACGAGAAAACCGGTAAAGAATCGCTAGAATGTGTTGAAAATGAGCCGAAAAAAGAGAAACAACCAAAATTCAAATGTGAAATCTGTtttaaaacattcaattttcatggaaatttcATGACGCACTCCAGAATCCATTCTGGGGAAAAGAACTTCAAGTGTGACATTTGCGAAATCTCATTTGCGAGAATGGGAACGTTAAAAATCCACAAGGTCATTCACTCTGGGGAGCGGAAATTTAAATGTTCAGAGTGTCCAAAAGCATTTAGCATCAAGCATAATTTAACGAACCACTTAAGAATTCATTCCGGAGAGCGTCCACATCAGTGTCAGATTTGTCAGAAAAGTTTCAACCAATCAAACATTCTAAAACGCCATCTCGTCATTCACAATAGGAGTTTGGAGCAAGGACAACATAAATGTGAGGAATGTCCATTAACTTTTGCCAGACTAATCCAGTACAAGCGCCATTTAAAAAGCCATAACAATGCGAAACCCCATAAATGTGAGACTTGCGAGAAACGCTTCCGACTGAAAAACGATTTGCAACGACATTCTCGGATACACAGCGGCGAGCGCCCATTTCAATGTCCGTATTGTCAAAAAACATTCAACATTAAATATAACATGGTGAAACATTCAAAACTTCATTCAAAAGATTCGGTTTTACGATGCGAATTATGCccgaaaacatttgaaaaaagctCTAAACTTTCGCTGCACATGCAATATCACAGCTACGACCGGAAATATTTATGTGACCTGTGCAGCCGAGGGTTTAGGTCAGGGGCTGAGCTGGAACGACACGTTTTAACGCACATtgagaaaaaagaagaattaAGTTGCGAAATCTGTAGgaataaatcatttaaaaacgcTAAATCCTTAGCGAAACACTTGAAGAAACatgataataaattgaaatcgtTTGAGACTGCTTTGGAACAACagactgatgatgatgatttgggTTTGTCGCATGACGAAATTCAGAGAAATGAGATTGTGATTAATATGAATAAGGGAGATGGACATGAGGAGAGAGCTCCTTTAGACTTACAGACGATTtag
Protein Sequence: MFMVQYHSGNEPPQYFAENSENYCRLCMSNQNGLQSIFLAEGKIKQKLVEKIFECTTVEITSENDYPSSVCHACILTLDEFHQYRNNCIQNDAIIRANRTRLQQQQPKAVSRTASVDSEINVAEIPTEFFSSRSSTPFTVASKLQIKMEQSDDEKTGKESLECVENEPKKEKQPKFKCEICFKTFNFHGNFMTHSRIHSGEKNFKCDICEISFARMGTLKIHKVIHSGERKFKCSECPKAFSIKHNLTNHLRIHSGERPHQCQICQKSFNQSNILKRHLVIHNRSLEQGQHKCEECPLTFARLIQYKRHLKSHNNAKPHKCETCEKRFRLKNDLQRHSRIHSGERPFQCPYCQKTFNIKYNMVKHSKLHSKDSVLRCELCPKTFEKSSKLSLHMQYHSYDRKYLCDLCSRGFRSGAELERHVLTHIEKKEELSCEICRNKSFKNAKSLAKHLKKHDNKLKSFETALEQQTDDDDLGLSHDEIQRNEIVINMNKGDGHEERAPLDLQTI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -