Basic Information

Insect: Mochlonyx cinctipes
Gene Symbol: -
Assembly: GCA_001014845.1
Location: JXPH01016398.1:3977-6029[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 1.2e-05 0.00051 20.5 2.7 1 23 163 185 163 185 0.96

2 11 0.00011 0.0045 17.5 4.2 1 23 215 238 215 238 0.97

3 11 0.013 0.54 11.0 1.3 2 23 251 272 250 272 0.95

4 11 8.9e-05 0.0037 17.8 0.9 1 23 278 300 278 300 0.99

5 11 0.002 0.083 13.6 0.4 1 23 306 329 306 329 0.94

6 11 4.6e-08 1.9e-06 28.2 1.3 3 23 351 371 350 371 0.99

7 11 0.0002 0.0085 16.7 3.5 1 23 377 399 377 399 0.98

8 11 0.0011 0.045 14.4 0.1 1 23 405 428 405 428 0.93

9 11 0.023 0.97 10.2 1.4 1 23 448 470 448 470 0.98

10 11 2.1e-06 8.7e-05 22.9 0.2 1 23 476 498 476 498 0.98

11 11 0.0025 0.1 13.3 0.4 1 22 504 525 504 525 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	1.2e-05	0.00051	20.5	2.7	1	23	163	185	163	185	0.96
2	11	0.00011	0.0045	17.5	4.2	1	23	215	238	215	238	0.97
3	11	0.013	0.54	11.0	1.3	2	23	251	272	250	272	0.95
4	11	8.9e-05	0.0037	17.8	0.9	1	23	278	300	278	300	0.99
5	11	0.002	0.083	13.6	0.4	1	23	306	329	306	329	0.94
6	11	4.6e-08	1.9e-06	28.2	1.3	3	23	351	371	350	371	0.99
7	11	0.0002	0.0085	16.7	3.5	1	23	377	399	377	399	0.98
8	11	0.0011	0.045	14.4	0.1	1	23	405	428	405	428	0.93
9	11	0.023	0.97	10.2	1.4	1	23	448	470	448	470	0.98
10	11	2.1e-06	8.7e-05	22.9	0.2	1	23	476	498	476	498	0.98
11	11	0.0025	0.1	13.3	0.4	1	22	504	525	504	525	0.96

Sequence Information

Coding Sequence: atggataatatagaGTGTCCACCAATTGAGATTAAGGAAGAACCTTTGGACGACGACCAAATGGGATTGGAGAACACACATTCGGAAACGCTTTTTGTTCGAGAGGAACATTACGATTTCCAtggagttttgaaaaatttgccaaCTGCACCAATAATAATTTCTAGTTCAgttctgaaaaatgaaattcttGATGAAAATCCTCCGATTACAGCAAAAATTGTAGTAAAAGaaGAAGCACCTTCGATTCAGCCTATTCCACTTCCACCGACAATAATAATTCCAGCACCAGAATCAGcagaaaatattgttaaaaaggAAAACCGAGAGAGCGAAGATGATGATTCTGATTCTGATGATTCTGATACTGATACTGATGACAATATACAGCAGGATGAGGAAGATGATGAAGAATCTGAACCTGATATTCCAAATAAAACAGATAATACTATAGGATGGTTCGAAAAGCAAAAGGTTCTCATAGGTCACGCTTGTAGCGTCTGCGAGAAAACATTCACAAGACGTAGCGACATGAAACGCCACGAAAAAATTCACATAAAGTCTACAACAAATGATAAGAAaccgaaaaaaaagaaaaggaacAGTTCCAGTGAATCTGATCAATCTGCCTCGTCCAAATTCTTCACGTGTAGACAATGCAACCGAAATTTTACGAGGCGAGATGTTTTACGAAGGCATCTCAAAAAGAAGCACCCCGATTTAGATGAAACTGTTGAACTACTGAGATTAAACTGTACAGTTTGCTCCAAATACTTTAAAAGTCAAGTTTTTTTGGACATGCATTACAAGCTGCACCAGGGGAAAAATCCGTATGAGTGTGACTATTGCCAGAAGGACCTGAAAACTGGGAGTCACCTGATTGAGCACCTAAGAATTCACACGGGGGAAAAACCATTTAAATGTGACTTATGCGATCAGACTTTTATTAGGATTATTGCTATGAAAAAACATAAGCAAGCGGATCACGGGATCCAAGGACTCATTCCGAAAAAGCCTCCAAATCCGGTAAAACCGGCAAAAGAAATTTTATGTAATGTTTGTGGTAAAAGTTTTACACGAAACGATAGCCTAAAAATGCATATGAGGATGCACACAGGTGAGAAGCCCTATATGTGTGATATTTGTTCCCGTGAGTTCTCATACCGTAAAACCCTGCGAGAACATCACCGGTTACACACTGGGGAGAAACCATTTGAGTGTGTTATTTGCGAAATGAAATTTGTGCGTGCCAATGACCTCAAAGTTCATGTGACGCTAGTCCATTACGACCCCGACAATCccccaataaaaaaaatcatcaccGTGCCAGAGGAGAAGAAATACGCTTGCGACACTTGCTTTGGTCGCTTCAAAACTAGCTCTATTTTAAAAGTACACAAGAGATCGCATACGGGTGAACGCCCTTTCGTCTGTGAACATTGCCAGAAGCCCTTTATTACTGCAGGGGATTTGAGGATACACGTTAGGATTCACACAGGAGAGAAACCCTATAAATGCGCAGGATGCAATGATTCGTTCCGAGTTAAACCGTTGCTAACAAAACACCAGAAGCGCTGTAAAAACTTTATGGAACTAGATCAGCTACATTTGCTTGGAGTCTAA
Protein Sequence: MDNIECPPIEIKEEPLDDDQMGLENTHSETLFVREEHYDFHGVLKNLPTAPIIISSSVLKNEILDENPPITAKIVVKEEAPSIQPIPLPPTIIIPAPESAENIVKKENRESEDDDSDSDDSDTDTDDNIQQDEEDDEESEPDIPNKTDNTIGWFEKQKVLIGHACSVCEKTFTRRSDMKRHEKIHIKSTTNDKKPKKKKRNSSSESDQSASSKFFTCRQCNRNFTRRDVLRRHLKKKHPDLDETVELLRLNCTVCSKYFKSQVFLDMHYKLHQGKNPYECDYCQKDLKTGSHLIEHLRIHTGEKPFKCDLCDQTFIRIIAMKKHKQADHGIQGLIPKKPPNPVKPAKEILCNVCGKSFTRNDSLKMHMRMHTGEKPYMCDICSREFSYRKTLREHHRLHTGEKPFECVICEMKFVRANDLKVHVTLVHYDPDNPPIKKIITVPEEKKYACDTCFGRFKTSSILKVHKRSHTGERPFVCEHCQKPFITAGDLRIHVRIHTGEKPYKCAGCNDSFRVKPLLTKHQKRCKNFMELDQLHLLGV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -