Basic Information

Insect: Mochlonyx cinctipes
Gene Symbol: -
Assembly: GCA_001014845.1
Location: JXPH01074574.1:771-2530[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0019 0.078 13.6 2.5 1 23 222 244 222 244 0.99

2 11 0.0049 0.2 12.3 1.8 1 23 249 271 249 271 0.96

3 11 9e-05 0.0038 17.8 1.7 1 23 277 300 277 300 0.97

4 11 0.00013 0.0054 17.3 0.8 1 23 306 328 306 328 0.98

5 11 0.00036 0.015 15.9 2.6 1 23 334 356 334 356 0.96

6 11 2.4e-05 0.001 19.6 1.2 2 23 371 392 370 392 0.97

7 11 7.8e-06 0.00032 21.1 1.0 3 23 400 420 398 420 0.97

8 11 4.1e-05 0.0017 18.9 1.4 1 23 426 448 426 448 0.98

9 11 0.00045 0.019 15.6 1.3 1 23 454 476 454 476 0.97

10 11 1.6e-06 6.5e-05 23.3 0.4 1 23 482 504 482 504 0.99

11 11 2.6e-05 0.0011 19.5 1.7 1 23 510 532 510 532 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0019	0.078	13.6	2.5	1	23	222	244	222	244	0.99
2	11	0.0049	0.2	12.3	1.8	1	23	249	271	249	271	0.96
3	11	9e-05	0.0038	17.8	1.7	1	23	277	300	277	300	0.97
4	11	0.00013	0.0054	17.3	0.8	1	23	306	328	306	328	0.98
5	11	0.00036	0.015	15.9	2.6	1	23	334	356	334	356	0.96
6	11	2.4e-05	0.001	19.6	1.2	2	23	371	392	370	392	0.97
7	11	7.8e-06	0.00032	21.1	1.0	3	23	400	420	398	420	0.97
8	11	4.1e-05	0.0017	18.9	1.4	1	23	426	448	426	448	0.98
9	11	0.00045	0.019	15.6	1.3	1	23	454	476	454	476	0.97
10	11	1.6e-06	6.5e-05	23.3	0.4	1	23	482	504	482	504	0.99
11	11	2.6e-05	0.0011	19.5	1.7	1	23	510	532	510	532	0.99

Sequence Information

Coding Sequence: ATGGATTATTATCAAACTATTTGCCGTACTTGTGAATCTACAAAGAACCTTTGCGATTTATCCAATGCTGGGAATGAGGAAACCGCAAACAGACTGTTCGTAGTGACAAATATAAAGATTAAATCGAATGACCCGATGCCTCAACGTATTTGTATGGATTGCGTGAATGAACTTCATTCTGTCTACAGTTTTATCGAGAAATGTGAAGCGACCGAAAGGAAATTGAGGAACGAGATTGCTTGCATAAAAGTAGTAGGGCTCGACGATAAGATTTACGATGAAGAAGAGATTATAGAAGAGCTTACGTGCTTCAAGAATGTAGATAATAGGGATGTTGTGGAAACGTTTGAAGTTCATGATGTTGAAGAAACTGGGCAAATTTCTACTGATGAAGTGGAAGTGGAAGTCGCAAGAGAAGGCGAGGAAGTAATGGAAGACAGTGAAGTAGTTGAAGAGGAAGCAAGTGAACGAGCAGAAGATGTGAGCCTTTATTACGAGGTCATAAACTCTGAACTTTTAGATAGAGAACTGTACGTTTCAGTCGAGGAAGTTTATTCAAAAGAAGATTTTAGGACCGAAGATGAAGACTATGTTGTAGAAGAAGATGAAGACGAAGAGCACGACGATGCGTCTCCAAGTAAAAAAGATGAGAAGGACAAGAAATATGTTTGCGATACTTGTAAAGCGGAGTTCAACAAATGTACAAGCCTCTATGTTCACATAAAAACTCACGGAAAACGAAGATTTCAATGTAAGACCTGTGAAAGATGGTTTGCCAGGAGAGCCCATCTAAAAAGCCACGAAGTTATGCACACTGGCCAAAAAAACTATCAATGTGCGAAATGCCCAAACAAGTATACGAGCAGCCGGAACCTTAAAAGGCACGTTCAGAGCACGCATGATGGAGACAAACCATTTGTGTGTGATTTGTGCGGAAAAGAATTCTCGCAGAAAACAATCCTTGTCGCCCATCACAACACACACATCCAGGAACGAAATTTCTGTTGCGATGTTTGTCCCAAGAAATTTAAATCTGAAAAACTATTGAAACTTCACGTTGATCGTCATCTTTCTTTCGAAAAAGTCTGCGTGAGCAATCAGGAGCCGAGCGAATGCGGCATTTGTCACAAAGTCTACTCTAACAGACTCTCACTTCGTAGTCACATGCAAGTTCACAATGATAGTAAAAAAGTAATCTGCAATTTTTGCGGAAAAACATTCAGCGTAATGGCGCACCTGCGGGTCCATCTGAGGTCGCACACAAAGGAGCAGCCCTTCGAGTGTCTCCAATGCAACAAAAGGTTCGGATACGAATCTTCGCTCAAAACTCATCTTTTAACACACACTGATTTACGACCTTACGCCTGTGACATTTGTCCGGCCACATTCCGACAGCTGAACCATCTCAAGGGCCACAAATTCACGCATACCGGAAATAAACCTTTCAAATGTCTCATCTGCAATAAAGCCTTTGCCCTGCGTGGAAATCTCACGATTCATTTGAGGACACACACTGGAAACTCTCCTTACCAATGTAGGCTTTGTGATAAGAAAATCAACGATTCAAATGCCCTCAAGAGGCACATGAAGAAACATAATAGGACGAGGATTATTAAGGTCGGGGACCTTACAATCATCGACGGCTATGACGAGATAAAGGAGGAGGAAAACgagataaaaattgaaaatgttttgattttagagtag
Protein Sequence: MDYYQTICRTCESTKNLCDLSNAGNEETANRLFVVTNIKIKSNDPMPQRICMDCVNELHSVYSFIEKCEATERKLRNEIACIKVVGLDDKIYDEEEIIEELTCFKNVDNRDVVETFEVHDVEETGQISTDEVEVEVAREGEEVMEDSEVVEEEASERAEDVSLYYEVINSELLDRELYVSVEEVYSKEDFRTEDEDYVVEEDEDEEHDDASPSKKDEKDKKYVCDTCKAEFNKCTSLYVHIKTHGKRRFQCKTCERWFARRAHLKSHEVMHTGQKNYQCAKCPNKYTSSRNLKRHVQSTHDGDKPFVCDLCGKEFSQKTILVAHHNTHIQERNFCCDVCPKKFKSEKLLKLHVDRHLSFEKVCVSNQEPSECGICHKVYSNRLSLRSHMQVHNDSKKVICNFCGKTFSVMAHLRVHLRSHTKEQPFECLQCNKRFGYESSLKTHLLTHTDLRPYACDICPATFRQLNHLKGHKFTHTGNKPFKCLICNKAFALRGNLTIHLRTHTGNSPYQCRLCDKKINDSNALKRHMKKHNRTRIIKVGDLTIIDGYDEIKEEENEIKIENVLILE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -