Basic Information

Insect: Mochlonyx cinctipes
Gene Symbol: -
Assembly: GCA_001014845.1
Location: JXPH01007007.1:1-4018[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0092 0.38 11.5 1.0 1 23 18 40 18 40 0.89

2 14 0.00015 0.0061 17.1 1.3 2 23 50 72 49 72 0.90

3 14 0.0037 0.15 12.7 2.7 2 23 79 101 79 101 0.94

4 14 0.0003 0.013 16.1 0.9 1 23 105 127 105 127 0.98

5 14 1.7e-05 0.00072 20.0 0.1 1 23 170 192 170 192 0.98

6 14 0.0011 0.047 14.4 1.4 1 23 200 223 200 223 0.95

7 14 0.00012 0.0049 17.4 5.0 3 23 232 253 230 253 0.96

8 14 1.1e-05 0.00046 20.7 0.1 2 23 258 279 257 279 0.96

9 14 0.017 0.72 10.6 4.4 1 23 285 308 285 308 0.98

10 14 0.00045 0.019 15.6 1.9 1 23 346 368 346 368 0.96

11 14 4.7e-07 2e-05 25.0 0.9 2 23 378 400 377 400 0.95

12 14 0.0015 0.063 13.9 1.2 3 23 409 430 408 430 0.91

13 14 7.7e-05 0.0032 18.0 0.4 1 23 434 456 434 456 0.98

14 14 0.00073 0.031 14.9 3.5 1 23 462 485 462 485 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0092	0.38	11.5	1.0	1	23	18	40	18	40	0.89
2	14	0.00015	0.0061	17.1	1.3	2	23	50	72	49	72	0.90
3	14	0.0037	0.15	12.7	2.7	2	23	79	101	79	101	0.94
4	14	0.0003	0.013	16.1	0.9	1	23	105	127	105	127	0.98
5	14	1.7e-05	0.00072	20.0	0.1	1	23	170	192	170	192	0.98
6	14	0.0011	0.047	14.4	1.4	1	23	200	223	200	223	0.95
7	14	0.00012	0.0049	17.4	5.0	3	23	232	253	230	253	0.96
8	14	1.1e-05	0.00046	20.7	0.1	2	23	258	279	257	279	0.96
9	14	0.017	0.72	10.6	4.4	1	23	285	308	285	308	0.98
10	14	0.00045	0.019	15.6	1.9	1	23	346	368	346	368	0.96
11	14	4.7e-07	2e-05	25.0	0.9	2	23	378	400	377	400	0.95
12	14	0.0015	0.063	13.9	1.2	3	23	409	430	408	430	0.91
13	14	7.7e-05	0.0032	18.0	0.4	1	23	434	456	434	456	0.98
14	14	0.00073	0.031	14.9	3.5	1	23	462	485	462	485	0.97

Sequence Information

Coding Sequence: TACAGTGATTTTGCACTGAAAGTCCACATGAGGGGTTCTCACAAGCAGATTTTTGTTTGCGAAATCTGTTCAAAGGTTTACAAGACTCCAGTCCAGTTCAGATTTCATAAGGAGCAACACGATAAATCATTGATTAAACCTCGAGTTGTCTGTAGTCTATGTGGCAAAAGTTACAAAAGGAAATGTAGATTGAATCGCCATATTGTAGCAGAGCATGGCGAAGTTAAGGAAGCAGAATGTAATATTTGTTAcaaagtatataaaaataaagaacgcCTTTATCGTCACAAACATTCTGTTCACAGCCATTCTTATCCGTGTACAATTTGCAATCGCACATTTAGTATTAAGCGAAGAATGATAGAACATATGACGACACATACAGGCCAAACTCTGTACGGTTGCGAATTTTGTCCAGAGAGATTTGGGTTTGGGTCACTTCGTGTTGTTCATCGATATTCACACAGACAACTACAAATGCATGATCGTTCAGCACACGGAGAGATTTTCGTTTGTGAAATATGCTCCAAAGTGTACAAAGGTAGAGCTCAGCTCAATATTCATATGGCTGTTCACGATAAGTCATTGCGTGTCTTACACGCTTGTGATATTTGTGGAAAGCTttaCAGAAGTAAAACAAGCATCATTCGTCACAAGAAAATGGATCATGTGACGCACAAACAAGACGTAAATTGTACAGTTTGTAATAAGCATTTCAGAAATAATGTGCATTTGAAAAACCACACGAATAAAGTGCATCGAAATAGTTTACCTTGCTCAGTctgtggaaaagtatttacaatgGCGAATAAGTTGAAGGAGCACATGAGCATACACACGGGCGAGATATTGTTCAAATGTCggttttgttcagaaaaattcaaattttctccaACACTTTACACGCATTTGAAAAAACAACATGAAAAAGAATGGGATGCTGTAAAAGctgaaaaaattaagagtggAAATAGagaaatgttATTTAACAAATTACAATTGAAGATTCATACAAAAGTGAAGCACGGAGAGAATCATGTTTGCGAAATCTGTTCCAAAATATACAGAAGTAAAACTTTTCTCCAATATCACATGGAAGAACATGATAAATCTTTGGTGCCGCCGAGATCTGTTTGCCAGATTTGTGGAAAGACTTACAAAAGAAAGAGTAAATTACTACGCCACATGGACATGGACCATTCAGCAGAAGATAAAAATGTTGATTGTGATGTTTGCGGTAAAACCTTTAAGCATAAAGTACTTCTGGATGGACATAAATATAAAGTGCATCGAAATGCGTTCCCATGCTCAGTATGTGGAAGGATTTTTAAAGTTCAGCTACGTTTGAAGGAACATATGAGCACGCATACTAaagagattttatatttttgcgaATTTTGTTCTGagagttttcaattttcatctacCTTATACAGACATATGCAGAAATACCACGGACAAGACTGGAAAATCGTAAAAGAAGCGAGAATGctggcaaaataa
Protein Sequence: YSDFALKVHMRGSHKQIFVCEICSKVYKTPVQFRFHKEQHDKSLIKPRVVCSLCGKSYKRKCRLNRHIVAEHGEVKEAECNICYKVYKNKERLYRHKHSVHSHSYPCTICNRTFSIKRRMIEHMTTHTGQTLYGCEFCPERFGFGSLRVVHRYSHRQLQMHDRSAHGEIFVCEICSKVYKGRAQLNIHMAVHDKSLRVLHACDICGKLYRSKTSIIRHKKMDHVTHKQDVNCTVCNKHFRNNVHLKNHTNKVHRNSLPCSVCGKVFTMANKLKEHMSIHTGEILFKCRFCSEKFKFSPTLYTHLKKQHEKEWDAVKAEKIKSGNREMLFNKLQLKIHTKVKHGENHVCEICSKIYRSKTFLQYHMEEHDKSLVPPRSVCQICGKTYKRKSKLLRHMDMDHSAEDKNVDCDVCGKTFKHKVLLDGHKYKVHRNAFPCSVCGRIFKVQLRLKEHMSTHTKEILYFCEFCSESFQFSSTLYRHMQKYHGQDWKIVKEARMLAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -