Basic Information

Insect: Mochlonyx cinctipes
Gene Symbol: -
Assembly: GCA_001014845.1
Location: JXPH01008961.1:18-1556[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.36 15 6.5 0.1 5 23 7 25 6 25 0.94

2 15 0.016 0.66 10.7 1.2 1 23 51 75 51 75 0.97

3 15 0.04 1.6 9.5 3.3 1 23 97 120 97 120 0.96

4 15 8.4e-07 3.5e-05 24.2 2.5 2 23 165 186 165 186 0.97

5 15 0.00055 0.023 15.3 1.3 1 23 192 214 192 214 0.98

6 15 7.8 3.3e+02 2.3 0.8 1 12 228 239 228 242 0.84

7 15 1.2e-06 5e-05 23.7 3.8 2 23 247 268 247 268 0.97

8 15 0.0015 0.064 13.9 0.6 1 23 274 296 274 296 0.97

9 15 0.0002 0.0084 16.7 0.5 1 23 302 325 302 325 0.97

10 15 0.00021 0.0086 16.7 2.4 1 23 336 358 336 358 0.97

11 15 5.8e-05 0.0024 18.4 2.9 1 23 364 386 364 386 0.99

12 15 2.8e-07 1.2e-05 25.7 1.8 1 23 400 423 400 423 0.97

13 15 0.00012 0.0051 17.4 0.1 1 23 429 451 429 451 0.98

14 15 0.00096 0.04 14.6 1.7 1 23 457 480 457 480 0.96

15 15 5.8e-07 2.4e-05 24.7 3.0 1 23 489 511 489 511 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.36	15	6.5	0.1	5	23	7	25	6	25	0.94
2	15	0.016	0.66	10.7	1.2	1	23	51	75	51	75	0.97
3	15	0.04	1.6	9.5	3.3	1	23	97	120	97	120	0.96
4	15	8.4e-07	3.5e-05	24.2	2.5	2	23	165	186	165	186	0.97
5	15	0.00055	0.023	15.3	1.3	1	23	192	214	192	214	0.98
6	15	7.8	3.3e+02	2.3	0.8	1	12	228	239	228	242	0.84
7	15	1.2e-06	5e-05	23.7	3.8	2	23	247	268	247	268	0.97
8	15	0.0015	0.064	13.9	0.6	1	23	274	296	274	296	0.97
9	15	0.0002	0.0084	16.7	0.5	1	23	302	325	302	325	0.97
10	15	0.00021	0.0086	16.7	2.4	1	23	336	358	336	358	0.97
11	15	5.8e-05	0.0024	18.4	2.9	1	23	364	386	364	386	0.99
12	15	2.8e-07	1.2e-05	25.7	1.8	1	23	400	423	400	423	0.97
13	15	0.00012	0.0051	17.4	0.1	1	23	429	451	429	451	0.98
14	15	0.00096	0.04	14.6	1.7	1	23	457	480	457	480	0.96
15	15	5.8e-07	2.4e-05	24.7	3.0	1	23	489	511	489	511	0.98

Sequence Information

Coding Sequence: ATGGAATTGAAATACGATATTTGTCCAATAAtgttaaaagaagaaaagaatctGCAGAAGCACAAGCTAATGCACCTAACTTGTACCAACCCCCCTCCTACTATTACACAGCAACATGAAGTTCTTCACGTTACAAGTCTAAAGCTAGAATTTAATTGCGATCACTGTACTGCATTCACTGCATTTGAAACACAATCTGAACTTGAAGACCATAAGAAAATACATGAAGGTGAACGCTCTTTTGAAAATACGTTCACGTTTGTTCACGTTCCAAGTTTGAAGTCAGAATTTAATTGCGATCACTGTACTCATCAAGCATTTGAAACACAATCTGAACTTGAAGACCATAAGAAAATACATGAAGATGATGTGcccaaattaagtttttttgagCGTACTAACGATGATGTTAGCTACAAAAAACCCAGTTCTTTTCAATCTCTTATGAGAATAAAGGATACGAGTGACGAAAAAAAGCAATTTCCGGTTGCAGAATGCAATAtttgtaaaaagaaattttacaaaaattcttatCTAACTAAGCATATGAGGGTACATACTAAAGAATGCCCTTACGTTTGTAAGATTTGCCAAGAAAAGTTCACATGGAAACAAACATTAGATAGACATATGCTTAAACATACTGAAGAGCATAAATTTAGTGAAGAAGACGACAAATCCCACGAGTGCAAtatttgtatgaagaaatttNAACATACTGGCCATCACGGTAAGGAAGAGTGCAATATTTGTAAGAAGAAATTCATCAGCAAACATTATCTTACTAGGCATATGAGGGTACATACTAAAGAACGTCCTCACGTTTGCGAAATTTGTCAAGAGAAGTTCACATGGAAGGATACCTTAGATGCACATATGATTAAACATACTGGAGACTATAAATTTAAGTGTGAATTCTGTGCAAAGCCATTTGCGAAGAGACAATCGTTTCAAGCACATATGATTTCTattcactcaatttttttttgtaaagagGATAAATTGCACGAGTGCAATATTTGTAAGAAGAAATTTAGCGAAATTGCTCACCTCACTGGGCATATGACGGTACATACTGAAGAATGCCCTTACGTTTGTGAGATTTGTCAAACAAAGTTCaaatggaaacaaaattttaatagacATATGCGTAAACATCCTGATGAGCATAAAATTAGTAAGGAAGACGATAAATCGCACGAGTGCAATATTTGTGAGAAGAAATTTAGCAGTAAATGGCAGCTAACTAGGCATATTATGACGGTACATACTAAAGATTACCCTTACGTTTGTGAGATCTGTGAGGAAAAGTTTCCAAGGAAAGAAAGATTAGATATACATATGATAAAACATACTGGAGAGTATAAATTTAGGTGTGAATTATGTAAAAAACCATTCGCTGAAAAACGTTGCTTTCAAGCTCATTTGATTTCCATACACGGTAAGGAAGATGACGACAAATCGCACGAGTGCAATATTTGTAAGGAGAAATTTAACACAAATTCTAATCTTACTTATCATATGAGGGTACATACTTAA
Protein Sequence: MELKYDICPIMLKEEKNLQKHKLMHLTCTNPPPTITQQHEVLHVTSLKLEFNCDHCTAFTAFETQSELEDHKKIHEGERSFENTFTFVHVPSLKSEFNCDHCTHQAFETQSELEDHKKIHEDDVPKLSFFERTNDDVSYKKPSSFQSLMRIKDTSDEKKQFPVAECNICKKKFYKNSYLTKHMRVHTKECPYVCKICQEKFTWKQTLDRHMLKHTEEHKFSEEDDKSHECNICMKKFXHTGHHGKEECNICKKKFISKHYLTRHMRVHTKERPHVCEICQEKFTWKDTLDAHMIKHTGDYKFKCEFCAKPFAKRQSFQAHMISIHSIFFCKEDKLHECNICKKKFSEIAHLTGHMTVHTEECPYVCEICQTKFKWKQNFNRHMRKHPDEHKISKEDDKSHECNICEKKFSSKWQLTRHIMTVHTKDYPYVCEICEEKFPRKERLDIHMIKHTGEYKFRCELCKKPFAEKRCFQAHLISIHGKEDDDKSHECNICKEKFNTNSNLTYHMRVHT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -