Mcic013987.1
Basic Information
- Insect
- Mochlonyx cinctipes
- Gene Symbol
- Zbtb8a
- Assembly
- GCA_001014845.1
- Location
- JXPH01002773.1:4804-8908[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 1.9e-05 0.00078 19.9 2.1 1 23 232 254 232 254 0.99 2 21 0.00097 0.04 14.6 0.9 1 23 260 283 260 283 0.95 3 21 0.0001 0.0042 17.7 0.3 1 23 289 311 289 311 0.96 4 21 5.5e-06 0.00023 21.6 2.2 1 23 317 339 317 339 0.99 5 21 0.027 1.1 10.0 0.4 1 23 345 369 345 369 0.98 6 21 0.00014 0.0058 17.2 2.8 1 23 375 397 375 397 0.97 7 21 0.0029 0.12 13.0 2.5 1 21 403 423 403 424 0.95 8 21 0.081 3.4 8.5 0.5 1 23 445 470 445 470 0.91 9 21 2.2 91 4.0 2.9 1 23 475 496 475 496 0.96 10 21 0.003 0.12 13.0 0.2 2 23 535 557 534 557 0.95 11 21 0.017 0.69 10.7 0.9 1 23 563 586 563 586 0.93 12 21 1.7e-05 0.00071 20.1 2.8 1 23 592 614 592 614 0.98 13 21 2e-05 0.00083 19.9 1.2 1 23 643 665 643 665 0.96 14 21 0.0002 0.0084 16.7 1.0 1 23 676 698 676 698 0.95 15 21 3.3 1.4e+02 3.5 3.4 3 23 706 726 705 726 0.96 16 21 2 84 4.1 2.9 2 23 742 764 741 764 0.93 17 21 0.00019 0.0079 16.8 3.7 1 23 770 792 770 792 0.97 18 21 0.00047 0.019 15.6 1.9 1 23 796 818 796 818 0.98 19 21 0.00022 0.0091 16.6 1.3 1 23 824 846 824 846 0.96 20 21 3.3e-05 0.0014 19.2 1.3 1 23 852 874 852 874 0.99 21 21 2.4 98 3.9 5.6 1 23 880 903 880 903 0.92
Sequence Information
- Coding Sequence
- ATGACTTCAGAGCAAAGGTTTGGTTCAAAACCCGATATGATGGAGATCGTAGAAATAGATCTACGATCAATGTGCAGAATTTGCGGCTTGAGTAAGGATAATTTAATTCCTATTTTTGAAGACGAAGGACTGCGGAATgaattacatgaaaaaataattaaatatctTCCTATAATTGAGGTAACTATCGAGGATGTCCTCTCAATTAGTGTTTGTGTCCAATGCACTAACGTGCTTCTTTTTTGGCACGAACTATACACAAATTGTCTACAAACAGACCTGAAGCTCAAGGAAATGGTACAGTTCCATAaagactttgaaaaaatggaACAGGCAGCTGTTGAAACTGATGAACATTTGGAATTGGAAGTGCAGGACTTGCAGGAGGAGAACGAACAATTAGAACAAGAGGAAGTAACAGAGAATCCCAAGGATGGAATGCTGTCTGACCATGTGTACGAAGACGAAGAATATGTCGAAGAACAAGAGTTAGAAGAAAATGAGTCAGAAAATTTTGTCGAAGCTGAAGAAATTCCAGAAAAaagGTCCCTTCGGTGCTCCACATCCCTAGAAGCTCCGTCAGCTGAgcaaaaacagaaattgaaaaagaaacacTCGCCTGGCTCGCAACTGAACAAGCTGGATCTTGATGTTGTCGAAAGTGCCAAAGTTTTAGCTGATGGGAAACTATGCTATCAATGTCCTGAATGCAAAAAATGTCTCAATTCTCCCTACACTTTCACATGGCATCTACGGATACACTCTGGGGAGCGACCTTTTCCCTGCAACTTGTGTAATAAAAGATTTAGGATTCTACAGGGATTAACGCGGCACGTTAAAGAATTTCACGATAAGAAACGCGAATACCCTTGTGAAATTTGCGGGAAAATGTTTGGAAACAGTCGTAATGTTAAAGAACATCGATATCTTCACACGAACGAGAAAAAGTATCAATGCGAGCAATGTCCAAAATCTTTTAACCAAAAAGCCTCTCTTTTCACCCACAAAAAGAGCCACACTCAAATATTTCCCTATAAATGTACATTCCCAAACTGTATTCAAGCGTTCCGTTCAAAAAATCCTCTCACACTACATATAAGGATTCACACTAATGAACGTCCATTCACATGTGACGTTTGTGATCGAAGCTTTAGGATAAAACACGAATTGAACAAGCATAAATTACTGCATTCCAATTCTCGCCCTTTCCAATGTAGCCTCTGCTTCCAGCAGTTCAAACAGAAACGTTACTTGATCAAACATTACAAGattattatatttttaattactctTTTTTGCATTCCCTTTTTCTACTCTATCGACAAAAGCGATTTCAGTTGTAGTTATTGTGAGAAAAACGTTAACTTTGCTACCAAAGATGGACTTGTCAAACATTTGAAACAAGAACACAATCATACAATCTTCCACTGCCAACAATGCGGAGAGTATTTGGACAGACGATTTCTGATGGAGCATATGCTTAAACACGCGCTCAGTCTTCAACTTGAATTCAAAACTGCTGAACCACCAACAGAACAGGAAACAGACCAGAAAATACCCCAGAAACCAGCGATTGAGATGAGGGGTGACAAAAAAACgctgaaatgttttatttgcgACAAAATACTGGCGAACAGGAGCGCCTTCGCTTACCACATGAACCAAGTCCATTCAAAAGAGAAGAACTTTGAATGTAATTTTTGCCAGAAACAATTTGGGACGAAAAGAATCCTCAAGAATCATATAAGCGGAATTCATGTCCGAAATCGACAGCACGAGTGTGACGATTGCAAAAAATCATTCAACACCTATTCTGCATTATACTCACACCTAAAAATGCATTCCGAGAGCGCCATTGATATACAGACCCTTAAAGACAACGAAAATGACGACCCACTAAAAATAGAAACGTGCGAAGAGCGTAACCACATTTGTCCAGAATGCAATGTCATGTTCAGGTACCAAAGCGAGCTACAATCCCATCAGTCCAGTCATGATCATGACGACAAAGGTTCCCAAATTTCCCACAACTGCCTAATATGTGGGAAAATATTTGGACGTAAATACAACATGGAAGTTCATTTATCGAACCATACAGAAGCCCAAGACAATTGCTGTAAAATATGTTGTCTCAGCTTCACGACGCCAATCGGTCTCGGAAAGCATAAATCAATCCACACGGACGAAGAGATGCGTAACTACGATACCTATAGATCAATAGTCAAATGCGAGATTTGCGGAGATACTTTTCACTCAATGTTTAAACTCTGTGACCACAAAGACTCGAtccattttaaaatcaaatatttcaactgcaaaaattgcaataaacaGTTTCGGAACGAAATGCATTTAAAAGCACacgaaaaaattcattttgaggAATTTAAATGTTTGCAATGTGGCAAAGAACTATCATCCCAGAAGCAGCTGCATGAACACGAGAGAATTCACTCAGATTTACGGCCTTACAAATGTGAAATTTGCAATTTAACGTTCCGAACCCGAAGTAATGCTATCCAGCATGGCCACATCCACACCAAAATTAAAGAATACAAATGTACGACTTGTTCATCAGTGTTCAGTAGGTCGAATACTCTAAAAGTACATATGCTGATTCATACGAACGAGAAGCCGTTCCATTGTAACTACTGCTCAATGAAATTCAATCAAAGCAGCATTAAATTTCGCCATACTCAAAGAATGCACAAGATTTGTGGGGTTTGCAAGATGGTGGTTGGGGATAAAAGGGCGATAGAAATACACAAATGGAAAGAACATACAATATTAGGAGTTTAA
- Protein Sequence
- MTSEQRFGSKPDMMEIVEIDLRSMCRICGLSKDNLIPIFEDEGLRNELHEKIIKYLPIIEVTIEDVLSISVCVQCTNVLLFWHELYTNCLQTDLKLKEMVQFHKDFEKMEQAAVETDEHLELEVQDLQEENEQLEQEEVTENPKDGMLSDHVYEDEEYVEEQELEENESENFVEAEEIPEKRSLRCSTSLEAPSAEQKQKLKKKHSPGSQLNKLDLDVVESAKVLADGKLCYQCPECKKCLNSPYTFTWHLRIHSGERPFPCNLCNKRFRILQGLTRHVKEFHDKKREYPCEICGKMFGNSRNVKEHRYLHTNEKKYQCEQCPKSFNQKASLFTHKKSHTQIFPYKCTFPNCIQAFRSKNPLTLHIRIHTNERPFTCDVCDRSFRIKHELNKHKLLHSNSRPFQCSLCFQQFKQKRYLIKHYKIIIFLITLFCIPFFYSIDKSDFSCSYCEKNVNFATKDGLVKHLKQEHNHTIFHCQQCGEYLDRRFLMEHMLKHALSLQLEFKTAEPPTEQETDQKIPQKPAIEMRGDKKTLKCFICDKILANRSAFAYHMNQVHSKEKNFECNFCQKQFGTKRILKNHISGIHVRNRQHECDDCKKSFNTYSALYSHLKMHSESAIDIQTLKDNENDDPLKIETCEERNHICPECNVMFRYQSELQSHQSSHDHDDKGSQISHNCLICGKIFGRKYNMEVHLSNHTEAQDNCCKICCLSFTTPIGLGKHKSIHTDEEMRNYDTYRSIVKCEICGDTFHSMFKLCDHKDSIHFKIKYFNCKNCNKQFRNEMHLKAHEKIHFEEFKCLQCGKELSSQKQLHEHERIHSDLRPYKCEICNLTFRTRSNAIQHGHIHTKIKEYKCTTCSSVFSRSNTLKVHMLIHTNEKPFHCNYCSMKFNQSSIKFRHTQRMHKICGVCKMVVGDKRAIEIHKWKEHTILGV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -